RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 PRRC1Q96M27 445 aa17.03■□□□□ 0.32
CLPTM1-209ENST00000588855 LRGUKQ96M69 825 aa17.03■□□□□ 0.32
CLPTM1-209ENST00000588855 DMRTA2Q96SC8 542 aa17.03■□□□□ 0.32
CLPTM1-209ENST00000588855 SRXN1Q9BYN0 137 aa17.03■□□□□ 0.32
CLPTM1-209ENST00000588855 POLR2J2Q9GZM3 115 aaKnown RBP17.03■□□□□ 0.32
CLPTM1-209ENST00000588855 POLR2J3Q9H1A7 115 aaKnown RBP17.03■□□□□ 0.32
CLPTM1-209ENST00000588855 MMADHCQ9H3L0 296 aaPredicted RBP17.03■□□□□ 0.32
CLPTM1-209ENST00000588855 CLCF1Q9UBD9 225 aa17.03■□□□□ 0.32
CLPTM1-209ENST00000588855 A4GNTQ9UNA3 340 aa17.03■□□□□ 0.32
CLPTM1-209ENST00000588855 A0A1B0GUH1 482 aa17.02■□□□□ 0.32
CLPTM1-209ENST00000588855 E9PLN8 166 aa17.02■□□□□ 0.32
CLPTM1-209ENST00000588855 hCG_2039718K7EN88 272 aa17.02■□□□□ 0.32
CLPTM1-209ENST00000588855 OR5F1O95221 314 aa17.02■□□□□ 0.32
CLPTM1-209ENST00000588855 PNMTP11086 282 aa17.02■□□□□ 0.32
CLPTM1-209ENST00000588855 MAP2K6P52564 334 aa17.02■□□□□ 0.32
CLPTM1-209ENST00000588855 EGR4Q05215 589 aa17.02■□□□□ 0.32
CLPTM1-209ENST00000588855 MYBPHQ13203 477 aa17.02■□□□□ 0.32
CLPTM1-209ENST00000588855 FLOT2Q14254 428 aa17.02■□□□□ 0.32
CLPTM1-209ENST00000588855 SGCBQ16585 318 aa17.02■□□□□ 0.32
CLPTM1-209ENST00000588855 PDSS1Q5T2R2 415 aa17.02■□□□□ 0.32
CLPTM1-209ENST00000588855 NSUN5P2Q63ZY6 315 aa17.02■□□□□ 0.32
CLPTM1-209ENST00000588855 SEM1Q6ZVN7 128 aa17.02■□□□□ 0.32
CLPTM1-209ENST00000588855 GDF7Q7Z4P5 450 aa17.02■□□□□ 0.32
CLPTM1-209ENST00000588855 UTP4Q969X6 686 aaKnown RBP17.02■□□□□ 0.32
CLPTM1-209ENST00000588855 VKORC1Q9BQB6 163 aa17.02■□□□□ 0.32
CLPTM1-209ENST00000588855 TRIM15Q9C019 465 aa17.02■□□□□ 0.32
CLPTM1-209ENST00000588855 ENPP4Q9Y6X5 453 aa17.02■□□□□ 0.32
CLPTM1-209ENST00000588855 DIDO1Q9BTC0 2240 aaKnown RBP17.02■□□□□ 0.32
CLPTM1-209ENST00000588855 MED12LQ86YW9 2145 aa17.02■□□□□ 0.31
CLPTM1-209ENST00000588855 IGKV1D-42A0A075B6H8 117 aa17.01■□□□□ 0.31
CLPTM1-209ENST00000588855 A0A087WUJ7 227 aa17.01■□□□□ 0.31
CLPTM1-209ENST00000588855 A8MVM7 634 aa17.01■□□□□ 0.31
CLPTM1-209ENST00000588855 FFAR1O14842 300 aa17.01■□□□□ 0.31
CLPTM1-209ENST00000588855 NPIPB7O75200 414 aa17.01■□□□□ 0.31
CLPTM1-209ENST00000588855 HOXD4P09016 255 aaPredicted RBP17.01■□□□□ 0.31
CLPTM1-209ENST00000588855 FUT4P22083 530 aa17.01■□□□□ 0.31
CLPTM1-209ENST00000588855 FKBP2P26885 142 aaKnown RBP17.01■□□□□ 0.31
CLPTM1-209ENST00000588855 CLK1P49759 484 aaKnown RBP17.01■□□□□ 0.31
CLPTM1-209ENST00000588855 DIO1P49895 249 aa17.01■□□□□ 0.31
CLPTM1-209ENST00000588855 CARD18P57730 90 aa17.01■□□□□ 0.31
CLPTM1-209ENST00000588855 PON3Q15166 354 aa17.01■□□□□ 0.31
CLPTM1-209ENST00000588855 SF3B4Q15427 424 aaKnown RBP eCLIP17.01■□□□□ 0.314e-15■■■■■ 40.1
CLPTM1-209ENST00000588855 PPP4R4Q6NUP7 873 aa17.01■□□□□ 0.31
CLPTM1-209ENST00000588855 P3H2Q8IVL5 708 aa17.01■□□□□ 0.31
CLPTM1-209ENST00000588855 OSTF1Q92882 214 aa17.01■□□□□ 0.31
CLPTM1-209ENST00000588855 SEPHS2Q99611 448 aa17.01■□□□□ 0.31
CLPTM1-209ENST00000588855 PRSS27Q9BQR3 290 aa17.01■□□□□ 0.31
CLPTM1-209ENST00000588855 TTYH2Q9BSA4 534 aa17.01■□□□□ 0.31
CLPTM1-209ENST00000588855 NDUFAF4Q9P032 175 aa17.01■□□□□ 0.31
CLPTM1-209ENST00000588855 RHCGQ9UBD6 479 aa17.01■□□□□ 0.31
CLPTM1-209ENST00000588855 RIMS3Q9UJD0 308 aa17.01■□□□□ 0.31
CLPTM1-209ENST00000588855 HDGFL3Q9Y3E1 203 aa17.01■□□□□ 0.31
CLPTM1-209ENST00000588855 PCNX1Q96RV3 2341 aa17.01■□□□□ 0.31
CLPTM1-209ENST00000588855 CD8B2A6NJW9 211 aa17.01■□□□□ 0.31
CLPTM1-209ENST00000588855 TGM6O95932 706 aa17.01■□□□□ 0.31
CLPTM1-209ENST00000588855 GLI4P10075 376 aa17.01■□□□□ 0.31
CLPTM1-209ENST00000588855 IMPDH2P12268 514 aa17.01■□□□□ 0.31
CLPTM1-209ENST00000588855 NUP107P57740 925 aa17.01■□□□□ 0.31
CLPTM1-209ENST00000588855 FOXD4Q12950 439 aaPredicted RBP17.01■□□□□ 0.31
CLPTM1-209ENST00000588855 IQCCQ4KMZ1 466 aa17.01■□□□□ 0.31
CLPTM1-209ENST00000588855 LINC00114Q6XXX2 140 aa17.01■□□□□ 0.31
CLPTM1-209ENST00000588855 TMPPEQ6ZT21 453 aa17.01■□□□□ 0.31
CLPTM1-209ENST00000588855 YTHDF3Q7Z739 585 aaKnown RBP17.01■□□□□ 0.31
CLPTM1-209ENST00000588855 FNDC9Q8TBE3 224 aa17.01■□□□□ 0.31
CLPTM1-209ENST00000588855 STK35Q8TDR2 534 aa17.01■□□□□ 0.31
CLPTM1-209ENST00000588855 UCN2Q96RP3 112 aa17.01■□□□□ 0.31
CLPTM1-209ENST00000588855 CALHM2Q9HA72 323 aa17.01■□□□□ 0.31
CLPTM1-209ENST00000588855 PAQR5Q9NXK6 330 aaPredicted RBP17.01■□□□□ 0.31
CLPTM1-209ENST00000588855 ERRFI1Q9UJM3 462 aaPredicted RBP17.01■□□□□ 0.31
CLPTM1-209ENST00000588855 NCOA6Q14686 2063 aaPredicted RBP17■□□□□ 0.31
CLPTM1-209ENST00000588855 USP9XQ93008 2570 aaPredicted RBP17■□□□□ 0.31
CLPTM1-209ENST00000588855 SLC22A20A6NK97 555 aa17■□□□□ 0.31
CLPTM1-209ENST00000588855 AQP12BA6NM10 295 aa17■□□□□ 0.31
CLPTM1-209ENST00000588855 DIRAS1O95057 198 aa17■□□□□ 0.31
CLPTM1-209ENST00000588855 PRSS23O95084 383 aa17■□□□□ 0.31
CLPTM1-209ENST00000588855 FABP3P05413 133 aa17■□□□□ 0.31
CLPTM1-209ENST00000588855 IDUAP35475 653 aa17■□□□□ 0.31
CLPTM1-209ENST00000588855 ERFP50548 548 aa17■□□□□ 0.31
CLPTM1-209ENST00000588855 ZNF239Q16600 458 aaKnown RBP17■□□□□ 0.31
CLPTM1-209ENST00000588855 C1orf140Q5VVS0 124 aa17■□□□□ 0.31
CLPTM1-209ENST00000588855 NKAIN4Q8IVV8 208 aa17■□□□□ 0.31
CLPTM1-209ENST00000588855 AQP12AQ8IXF9 295 aa17■□□□□ 0.31
CLPTM1-209ENST00000588855 OFCC1Q8IZS5 231 aa17■□□□□ 0.31
CLPTM1-209ENST00000588855 C9orf106Q8NAJ2 232 aa17■□□□□ 0.31
CLPTM1-209ENST00000588855 CPNE4Q96A23 557 aaPredicted RBP17■□□□□ 0.31
CLPTM1-209ENST00000588855 KTI12Q96EK9 354 aaPredicted RBP17■□□□□ 0.31
CLPTM1-209ENST00000588855 CCDC120Q96HB5 630 aa17■□□□□ 0.31
CLPTM1-209ENST00000588855 ZNF300Q96RE9 604 aaPredicted RBP17■□□□□ 0.31
CLPTM1-209ENST00000588855 POTEKPQ9BYX7 375 aa17■□□□□ 0.31
CLPTM1-209ENST00000588855 SLC5A6Q9Y289 635 aa17■□□□□ 0.31
CLPTM1-209ENST00000588855 MBD3L4A6NDZ8 208 aaPredicted RBP16.99■□□□□ 0.31
CLPTM1-209ENST00000588855 MBD3L3A6NE82 208 aaPredicted RBP16.99■□□□□ 0.31
CLPTM1-209ENST00000588855 MBD3L5A6NJ08 208 aaPredicted RBP16.99■□□□□ 0.31
CLPTM1-209ENST00000588855 SULT2B1O00204 365 aa16.99■□□□□ 0.31
CLPTM1-209ENST00000588855 TOXO94900 526 aa16.99■□□□□ 0.31
CLPTM1-209ENST00000588855 PMS2P2O95744 297 aa16.99■□□□□ 0.31
CLPTM1-209ENST00000588855 MT-ND1P03886 318 aa16.99■□□□□ 0.31
CLPTM1-209ENST00000588855 KLK2P20151 261 aa16.99■□□□□ 0.31
CLPTM1-209ENST00000588855 RAC3P60763 192 aa16.99■□□□□ 0.31
CLPTM1-209ENST00000588855 CSNK2A1P68400 391 aaPredicted RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms