RNA–Protein interactions for RNA: ENST00000588713.1

LIG3-211, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-211ENST00000588713 ANXA5P08758 320 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 ADRA2AP08913 450 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 HBQ1P09105 142 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 ACSM4P0C7M7 580 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 FAM157CP0CG43 387 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 NR2F6P10588 404 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 ICAM2P13598 275 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 COX7A2P14406 83 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 PRKACAP17612 351 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 EPORP19235 508 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 ITGALP20701 1170 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 IDSP22304 550 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 AK4P27144 223 aaPredicted RBP3.82□□□□□ -1.8
LIG3-211ENST00000588713 SLC6A1P30531 599 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 NUP62P37198 522 aaPredicted RBP3.82□□□□□ -1.8
LIG3-211ENST00000588713 BDKRB1P46663 353 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 SLC6A12P48065 614 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 HNMTP50135 292 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 CRISP3P54108 245 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 PCBP3P57721 371 aaKnown RBP3.82□□□□□ -1.8
LIG3-211ENST00000588713 TAP2Q03519 686 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 KRTAP1-1Q07627 177 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 ACSM1Q08AH1 577 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 MAP4K2Q12851 820 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 GAB1Q13480 694 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 SCARB2Q14108 478 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 IL18Q14116 193 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 PTPRCAPQ14761 206 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 HEPACAMQ14CZ8 416 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 PTGES3Q15185 160 aaKnown RBP3.82□□□□□ -1.8
LIG3-211ENST00000588713 FCN2Q15485 313 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 RGNQ15493 299 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 PLA1AQ53H76 456 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 LRRC73Q5JTD7 316 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 MPP7Q5T2T1 576 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 ZNF648Q5T619 568 aaPredicted RBP3.82□□□□□ -1.8
LIG3-211ENST00000588713 PXDC1Q5TGL8 231 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 PTRHD1Q6GMV3 140 aaKnown RBP3.82□□□□□ -1.8
LIG3-211ENST00000588713 C22orf42Q6IC83 251 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 ZNF770Q6IQ21 691 aaPredicted RBP3.82□□□□□ -1.8
LIG3-211ENST00000588713 HEPHL1Q6MZM0 1159 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 NOXRED1Q6NXP6 359 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 TMEM81Q6P7N7 255 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 CASP12Q6UXS9 341 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 BAIAP2L2Q6UXY1 529 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 RRM2BQ7LG56 351 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 TSEN54Q7Z6J9 526 aaKnown RBP3.82□□□□□ -1.8
LIG3-211ENST00000588713 LRRC28Q86X40 367 aaPredicted RBP3.82□□□□□ -1.8
LIG3-211ENST00000588713 PPP1R3BQ86XI6 285 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 WFDC8Q8IUA0 241 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 KLHDC8AQ8IYD2 350 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 PIANPQ8IYJ0 282 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 OR8H3Q8N146 312 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 LINC00471Q8N535 108 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 VPS37AQ8NEZ2 397 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 OR9Q2Q8NGE9 314 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 OR5T2Q8NGG2 359 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 OR1N1Q8NGS0 311 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 LILRB1Q8NHL6 650 aaPredicted RBP3.82□□□□□ -1.8
LIG3-211ENST00000588713 RFT1Q96AA3 541 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 ESAMQ96AP7 390 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 CIDECQ96AQ7 238 aaPredicted RBP3.82□□□□□ -1.8
LIG3-211ENST00000588713 PHF21AQ96BD5 680 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 OTULINQ96BN8 352 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 ZMYND19Q96E35 227 aaPredicted RBP3.82□□□□□ -1.8
LIG3-211ENST00000588713 OTUB1Q96FW1 271 aaPredicted RBP3.82□□□□□ -1.8
LIG3-211ENST00000588713 ERMAPQ96PL5 475 aaPredicted RBP3.82□□□□□ -1.8
LIG3-211ENST00000588713 SORCS2Q96PQ0 1159 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 ATF6BQ99941 703 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 UQCC2Q9BRT2 126 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 KATNB1Q9BVA0 655 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 JAM3Q9BX67 310 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 TSSK6Q9BXA6 273 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 ADGRE3Q9BY15 652 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 HDAC8Q9BY41 377 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 BHLHE41Q9C0J9 482 aaPredicted RBP3.82□□□□□ -1.8
LIG3-211ENST00000588713 MAGEH1Q9H213 219 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 OR51B5Q9H339 312 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 DPAGT1Q9H3H5 408 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 GHITMQ9H3K2 345 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 LDAHQ9H6V9 325 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 NMNAT1Q9HAN9 279 aaPredicted RBP3.82□□□□□ -1.8
LIG3-211ENST00000588713 TPT1P8Q9HAU6 139 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 BRF2Q9HAW0 419 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 FGF22Q9HCT0 170 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 AMBNQ9NP70 447 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 SARS2Q9NP81 518 aaKnown RBP3.82□□□□□ -1.8
LIG3-211ENST00000588713 FGF20Q9NP95 211 aaPredicted RBP3.82□□□□□ -1.8
LIG3-211ENST00000588713 KCNJ16Q9NPI9 418 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 B3GAT2Q9NPZ5 323 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 DMRT3Q9NQL9 472 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 FARSBQ9NSD9 589 aaKnown RBP3.82□□□□□ -1.8
LIG3-211ENST00000588713 MRPS18AQ9NVS2 196 aaKnown RBP3.82□□□□□ -1.8
LIG3-211ENST00000588713 KCTD5Q9NXV2 234 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 TAS2R7Q9NYW3 318 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 ZNF224Q9NZL3 707 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 TAAR2Q9P1P5 351 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 NLKQ9UBE8 527 aa3.82□□□□□ -1.8
LIG3-211ENST00000588713 ZMAT5Q9UDW3 170 aaKnown RBP3.82□□□□□ -1.8
LIG3-211ENST00000588713 IL36AQ9UHA7 158 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms