RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 PTOV1Q86YD1 416 aa13.2□□□□□ -0.3
ATG4D-207ENST00000587256 SLC35B4Q969S0 331 aa13.2□□□□□ -0.3
ATG4D-207ENST00000587256 DACH2Q96NX9 599 aa13.2□□□□□ -0.3
ATG4D-207ENST00000587256 FAM107BQ9H098 131 aa13.2□□□□□ -0.3
ATG4D-207ENST00000587256 CLEC4MQ9H2X3 399 aaPredicted RBP13.2□□□□□ -0.3
ATG4D-207ENST00000587256 KLHL28Q9NXS3 571 aa13.2□□□□□ -0.3
ATG4D-207ENST00000587256 EMC3Q9P0I2 261 aa13.2□□□□□ -0.3
ATG4D-207ENST00000587256 ARMCX1Q9P291 453 aa13.2□□□□□ -0.3
ATG4D-207ENST00000587256 TMEM181Q9P2C4 612 aa13.2□□□□□ -0.3
ATG4D-207ENST00000587256 RPS6KB2Q9UBS0 482 aa13.2□□□□□ -0.3
ATG4D-207ENST00000587256 TESMINQ9Y4I5 508 aa13.2□□□□□ -0.3
ATG4D-207ENST00000587256 ANKRD17O75179 2603 aaKnown RBP13.19□□□□□ -0.3
ATG4D-207ENST00000587256 LOC100653049A0A140TA62 436 aa13.19□□□□□ -0.3
ATG4D-207ENST00000587256 ZC3H12DA2A288 527 aaKnown RBP13.19□□□□□ -0.3
ATG4D-207ENST00000587256 SLC22A2O15244 555 aa13.19□□□□□ -0.3
ATG4D-207ENST00000587256 KRT34O76011 436 aa13.19□□□□□ -0.3
ATG4D-207ENST00000587256 ADSLP30566 484 aaPredicted RBP13.19□□□□□ -0.3
ATG4D-207ENST00000587256 IDUAP35475 653 aa13.19□□□□□ -0.3
ATG4D-207ENST00000587256 PCYT1AP49585 367 aa13.19□□□□□ -0.3
ATG4D-207ENST00000587256 RGS8P57771 180 aaPredicted RBP13.19□□□□□ -0.3
ATG4D-207ENST00000587256 TFAP2EQ6VUC0 442 aa13.19□□□□□ -0.3
ATG4D-207ENST00000587256 NUFIP2Q7Z417 695 aaKnown RBP13.19□□□□□ -0.3
ATG4D-207ENST00000587256 SPATA21Q7Z572 469 aa13.19□□□□□ -0.3
ATG4D-207ENST00000587256 MTDHQ86UE4 582 aaKnown RBP13.19□□□□□ -0.3
ATG4D-207ENST00000587256 SLC30A8Q8IWU4 369 aa13.19□□□□□ -0.3
ATG4D-207ENST00000587256 PCYOX1LQ8NBM8 494 aa13.19□□□□□ -0.3
ATG4D-207ENST00000587256 BHLHE22Q8NFJ8 381 aaPredicted RBP13.19□□□□□ -0.3
ATG4D-207ENST00000587256 OR10A6Q8NH74 314 aa13.19□□□□□ -0.3
ATG4D-207ENST00000587256 PIGXQ8TBF5 258 aa13.19□□□□□ -0.3
ATG4D-207ENST00000587256 C3orf49Q96BT1 292 aa13.19□□□□□ -0.3
ATG4D-207ENST00000587256 LRRC58Q96CX6 371 aa13.19□□□□□ -0.3
ATG4D-207ENST00000587256 ZNF300Q96RE9 604 aaPredicted RBP13.19□□□□□ -0.3
ATG4D-207ENST00000587256 SH3GL1Q99961 368 aa13.19□□□□□ -0.3
ATG4D-207ENST00000587256 ADAM19Q9H013 955 aa13.19□□□□□ -0.3
ATG4D-207ENST00000587256 NSRP1Q9H0G5 558 aaKnown RBP13.19□□□□□ -0.3
ATG4D-207ENST00000587256 KAT8Q9H7Z6 458 aaKnown RBP13.19□□□□□ -0.3
ATG4D-207ENST00000587256 BCO1Q9HAY6 547 aa13.19□□□□□ -0.3
ATG4D-207ENST00000587256 RASSF1Q9NS23 344 aa13.19□□□□□ -0.3
ATG4D-207ENST00000587256 PRDM4Q9UKN5 801 aa13.19□□□□□ -0.3
ATG4D-207ENST00000587256 TACC2O95359 2948 aa13.19□□□□□ -0.3
ATG4D-207ENST00000587256 CSMD1Q96PZ7 3565 aa13.19□□□□□ -0.3
ATG4D-207ENST00000587256 FXYD1O00168 92 aa13.18□□□□□ -0.3
ATG4D-207ENST00000587256 OPN1SWP03999 348 aa13.18□□□□□ -0.3
ATG4D-207ENST00000587256 PCGF2P35227 344 aa13.18□□□□□ -0.3
ATG4D-207ENST00000587256 SLC35A1P78382 337 aa13.18□□□□□ -0.3
ATG4D-207ENST00000587256 BNIP2Q12982 314 aa13.18□□□□□ -0.3
ATG4D-207ENST00000587256 DAZAP2Q15038 168 aaPredicted RBP13.18□□□□□ -0.3
ATG4D-207ENST00000587256 POU4F3Q15319 338 aa13.18□□□□□ -0.3
ATG4D-207ENST00000587256 GLIPR1L2Q4G1C9 344 aa13.18□□□□□ -0.3
ATG4D-207ENST00000587256 RABL3Q5HYI8 236 aa13.18□□□□□ -0.3
ATG4D-207ENST00000587256 INTS11Q5TA45 600 aaKnown RBP13.18□□□□□ -0.3
ATG4D-207ENST00000587256 NANOGP8Q6NSW7 305 aa13.18□□□□□ -0.3
ATG4D-207ENST00000587256 NET1Q7Z628 596 aaPredicted RBP13.18□□□□□ -0.3
ATG4D-207ENST00000587256 GALNT5Q7Z7M9 940 aa13.18□□□□□ -0.3
ATG4D-207ENST00000587256 COMTD1Q86VU5 262 aa13.18□□□□□ -0.3
ATG4D-207ENST00000587256 POU5F2Q8N7G0 328 aa13.18□□□□□ -0.3
ATG4D-207ENST00000587256 OR8J3Q8NGG0 315 aa13.18□□□□□ -0.3
ATG4D-207ENST00000587256 ZNF775Q96BV0 537 aaPredicted RBP13.18□□□□□ -0.3
ATG4D-207ENST00000587256 ZC3HAV1LQ96H79 300 aaKnown RBP13.18□□□□□ -0.3
ATG4D-207ENST00000587256 TAPBPLQ9BX59 468 aa13.18□□□□□ -0.3
ATG4D-207ENST00000587256 PIF1Q9H611 641 aa13.18□□□□□ -0.3
ATG4D-207ENST00000587256 NANOGQ9H9S0 305 aa13.18□□□□□ -0.3
ATG4D-207ENST00000587256 GID8Q9NWU2 228 aa13.18□□□□□ -0.3
ATG4D-207ENST00000587256 ZNF226Q9NYT6 803 aa13.18□□□□□ -0.3
ATG4D-207ENST00000587256 TESQ9UGI8 421 aaKnown RBP13.18□□□□□ -0.3
ATG4D-207ENST00000587256 TRAPPC4Q9Y296 219 aa13.18□□□□□ -0.3
ATG4D-207ENST00000587256 ELOA3DA6NLF2 546 aaPredicted RBP13.17□□□□□ -0.3
ATG4D-207ENST00000587256 ZNF724A8MTY0 619 aa13.17□□□□□ -0.3
ATG4D-207ENST00000587256 A8MVM7 634 aa13.17□□□□□ -0.3
ATG4D-207ENST00000587256 TPST1O60507 370 aa13.17□□□□□ -0.3
ATG4D-207ENST00000587256 EIF1BO60739 113 aaKnown RBP13.17□□□□□ -0.3
ATG4D-207ENST00000587256 CCDC22O60826 627 aa13.17□□□□□ -0.3
ATG4D-207ENST00000587256 GOSR1O95249 250 aa13.17□□□□□ -0.3
ATG4D-207ENST00000587256 NPPAP01160 153 aa13.17□□□□□ -0.3
ATG4D-207ENST00000587256 GPIP06744 558 aa13.17□□□□□ -0.3
ATG4D-207ENST00000587256 IMPDH2P12268 514 aa13.17□□□□□ -0.3
ATG4D-207ENST00000587256 FPR1P21462 350 aa13.17□□□□□ -0.3
ATG4D-207ENST00000587256 PCBP3P57721 371 aaKnown RBP13.17□□□□□ -0.3
ATG4D-207ENST00000587256 DMTNQ08495 405 aa13.17□□□□□ -0.3
ATG4D-207ENST00000587256 OR7A5Q15622 319 aa13.17□□□□□ -0.3
ATG4D-207ENST00000587256 ELOA3BQ3SY89 546 aa13.17□□□□□ -0.3
ATG4D-207ENST00000587256 ANKRD34AQ69YU3 496 aa13.17□□□□□ -0.3
ATG4D-207ENST00000587256 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.17□□□□□ -0.3
ATG4D-207ENST00000587256 PATL1Q86TB9 770 aaKnown RBP13.17□□□□□ -0.3
ATG4D-207ENST00000587256 ATG4DQ86TL0 474 aaPredicted RBP13.17□□□□□ -0.3
ATG4D-207ENST00000587256 RANBP3LQ86VV4 465 aaPredicted RBP13.17□□□□□ -0.3
ATG4D-207ENST00000587256 ZNF100Q8IYN0 542 aa13.17□□□□□ -0.3
ATG4D-207ENST00000587256 SMYD1Q8NB12 490 aa13.17□□□□□ -0.3
ATG4D-207ENST00000587256 ELOA3Q8NG57 546 aa13.17□□□□□ -0.3
ATG4D-207ENST00000587256 OR52E4Q8NGH9 312 aa13.17□□□□□ -0.3
ATG4D-207ENST00000587256 SLC26A7Q8TE54 656 aa13.17□□□□□ -0.3
ATG4D-207ENST00000587256 RCN3Q96D15 328 aa13.17□□□□□ -0.3
ATG4D-207ENST00000587256 WFIKKN1Q96NZ8 548 aa13.17□□□□□ -0.3
ATG4D-207ENST00000587256 ECSITQ9BQ95 431 aa13.17□□□□□ -0.3
ATG4D-207ENST00000587256 NAA11Q9BSU3 229 aaPredicted RBP13.17□□□□□ -0.3
ATG4D-207ENST00000587256 TRIM2Q9C040 744 aa13.17□□□□□ -0.3
ATG4D-207ENST00000587256 SELENONQ9NZV5 590 aa13.17□□□□□ -0.3
ATG4D-207ENST00000587256 ING1Q9UK53 422 aaPredicted RBP13.17□□□□□ -0.3
ATG4D-207ENST00000587256 CCDC168Q8NDH2 2452 aa13.16□□□□□ -0.3
ATG4D-207ENST00000587256 IGKV3D-15A0A087WSY6 115 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms