RNA–Protein interactions for RNA: ENST00000586555.2

CIRBP-209, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-209ENST00000586555 SCARB2Q14108 478 aa18.37■□□□□ 0.53
CIRBP-209ENST00000586555 MAPRE2Q15555 327 aa18.37■□□□□ 0.53
CIRBP-209ENST00000586555 CDC20BQ86Y33 519 aa18.37■□□□□ 0.53
CIRBP-209ENST00000586555 CLIP4Q8N3C7 705 aa18.37■□□□□ 0.53
CIRBP-209ENST00000586555 CADM2Q8N3J6 435 aa18.37■□□□□ 0.53
CIRBP-209ENST00000586555 BHLHE22Q8NFJ8 381 aaPredicted RBP18.37■□□□□ 0.53
CIRBP-209ENST00000586555 ANKRD27Q96NW4 1050 aa18.37■□□□□ 0.53
CIRBP-209ENST00000586555 CGREF1Q99674 301 aa18.37■□□□□ 0.53
CIRBP-209ENST00000586555 ADAM19Q9H013 955 aa18.37■□□□□ 0.53
CIRBP-209ENST00000586555 TMEM181Q9P2C4 612 aa18.37■□□□□ 0.53
CIRBP-209ENST00000586555 SMAD9O15198 467 aaKnown RBP18.36■□□□□ 0.53
CIRBP-209ENST00000586555 SERPINB7O75635 380 aa18.36■□□□□ 0.53
CIRBP-209ENST00000586555 FESP07332 822 aa18.36■□□□□ 0.53
CIRBP-209ENST00000586555 PRKAR1BP31321 381 aa18.36■□□□□ 0.53
CIRBP-209ENST00000586555 ACAA2P42765 397 aaKnown RBP18.36■□□□□ 0.53
CIRBP-209ENST00000586555 RBBP4Q09028 425 aa18.36■□□□□ 0.53
CIRBP-209ENST00000586555 CYLC2Q14093 348 aaPredicted RBP18.36■□□□□ 0.53
CIRBP-209ENST00000586555 MMEL1Q495T6 779 aa18.36■□□□□ 0.53
CIRBP-209ENST00000586555 HIPK4Q8NE63 616 aa18.36■□□□□ 0.53
CIRBP-209ENST00000586555 SH3GL1Q99961 368 aa18.36■□□□□ 0.53
CIRBP-209ENST00000586555 BCO1Q9HAY6 547 aa18.36■□□□□ 0.53
CIRBP-209ENST00000586555 EMC3Q9P0I2 261 aa18.36■□□□□ 0.53
CIRBP-209ENST00000586555 KLHL14Q9P2G3 628 aa18.36■□□□□ 0.53
CIRBP-209ENST00000586555 ANGPT4Q9Y264 503 aa18.36■□□□□ 0.53
CIRBP-209ENST00000586555 TESMINQ9Y4I5 508 aa18.36■□□□□ 0.53
CIRBP-209ENST00000586555 ZNF724A8MTY0 619 aa18.35■□□□□ 0.53
CIRBP-209ENST00000586555 EIF1BO60739 113 aaKnown RBP18.35■□□□□ 0.53
CIRBP-209ENST00000586555 ADSLP30566 484 aaPredicted RBP18.35■□□□□ 0.53
CIRBP-209ENST00000586555 OR2B6P58173 313 aa18.35■□□□□ 0.53
CIRBP-209ENST00000586555 SLC35A1P78382 337 aa18.35■□□□□ 0.53
CIRBP-209ENST00000586555 PDK3Q15120 406 aa18.35■□□□□ 0.53
CIRBP-209ENST00000586555 CYP51A1Q16850 503 aa18.35■□□□□ 0.53
CIRBP-209ENST00000586555 SLC30A8Q8IWU4 369 aa18.35■□□□□ 0.53
CIRBP-209ENST00000586555 C11orf65Q8NCR3 313 aa18.35■□□□□ 0.53
CIRBP-209ENST00000586555 PIGXQ8TBF5 258 aa18.35■□□□□ 0.53
CIRBP-209ENST00000586555 ARL5BQ96KC2 179 aa18.35■□□□□ 0.53
CIRBP-209ENST00000586555 WFIKKN1Q96NZ8 548 aa18.35■□□□□ 0.53
CIRBP-209ENST00000586555 PSD2Q9BQI7 771 aa18.35■□□□□ 0.53
CIRBP-209ENST00000586555 CPPED1Q9BRF8 314 aaPredicted RBP18.35■□□□□ 0.53
CIRBP-209ENST00000586555 NAA11Q9BSU3 229 aaPredicted RBP18.35■□□□□ 0.53
CIRBP-209ENST00000586555 HDHD5Q9BXW7 423 aa18.35■□□□□ 0.53
CIRBP-209ENST00000586555 OR11A1Q9GZK7 315 aa18.35■□□□□ 0.53
CIRBP-209ENST00000586555 KLHL28Q9NXS3 571 aa18.35■□□□□ 0.53
CIRBP-209ENST00000586555 RPS6KB2Q9UBS0 482 aa18.35■□□□□ 0.53
CIRBP-209ENST00000586555 SLC13A4Q9UKG4 626 aa18.35■□□□□ 0.53
CIRBP-209ENST00000586555 GPR52Q9Y2T5 361 aa18.35■□□□□ 0.53
CIRBP-209ENST00000586555 TMEM72A0PK05 275 aa18.34■□□□□ 0.53
CIRBP-209ENST00000586555 BBIP1A8MTZ0 92 aa18.34■□□□□ 0.53
CIRBP-209ENST00000586555 GPR171O14626 319 aa18.34■□□□□ 0.53
CIRBP-209ENST00000586555 NPPAP01160 153 aa18.34■□□□□ 0.53
CIRBP-209ENST00000586555 RETREG3Q86VR2 466 aa18.34■□□□□ 0.53
CIRBP-209ENST00000586555 TGIF2LYQ8IUE0 185 aa18.34■□□□□ 0.53
CIRBP-209ENST00000586555 POTEKPQ9BYX7 375 aa18.34■□□□□ 0.53
CIRBP-209ENST00000586555 OR10A4Q9H209 315 aa18.34■□□□□ 0.53
CIRBP-209ENST00000586555 IKZF5Q9H5V7 419 aa18.34■□□□□ 0.53
CIRBP-209ENST00000586555 EVA1AQ9H8M9 152 aa18.34■□□□□ 0.53
CIRBP-209ENST00000586555 CD99P14209 185 aa18.33■□□□□ 0.52
CIRBP-209ENST00000586555 SF3A3Q12874 501 aaKnown RBP eCLIP18.33■□□□□ 0.522e-13■■■□□ 18
CIRBP-209ENST00000586555 KLF10Q13118 480 aa18.33■□□□□ 0.52
CIRBP-209ENST00000586555 COQ5Q5HYK3 327 aa18.33■□□□□ 0.52
CIRBP-209ENST00000586555 DHRS4L2Q6PKH6 230 aa18.33■□□□□ 0.52
CIRBP-209ENST00000586555 NUFIP2Q7Z417 695 aaKnown RBP18.33■□□□□ 0.52
CIRBP-209ENST00000586555 GALNT5Q7Z7M9 940 aa18.33■□□□□ 0.52
CIRBP-209ENST00000586555 SERPINA11Q86U17 422 aa18.33■□□□□ 0.52
CIRBP-209ENST00000586555 MBD6Q96DN6 1003 aa18.33■□□□□ 0.52
CIRBP-209ENST00000586555 SAR1AQ9NR31 198 aa18.33■□□□□ 0.52
CIRBP-209ENST00000586555 FLNAP21333 2647 aaKnown RBP18.32■□□□□ 0.52
CIRBP-209ENST00000586555 A8MVM7 634 aa18.32■□□□□ 0.52
CIRBP-209ENST00000586555 SLC22A2O15244 555 aa18.32■□□□□ 0.52
CIRBP-209ENST00000586555 GPIP06744 558 aa18.32■□□□□ 0.52
CIRBP-209ENST00000586555 PRG2P13727 222 aa18.32■□□□□ 0.52
CIRBP-209ENST00000586555 DNASE1P24855 282 aa18.32■□□□□ 0.52
CIRBP-209ENST00000586555 IDUAP35475 653 aa18.32■□□□□ 0.52
CIRBP-209ENST00000586555 MTPNP58546 118 aa18.32■□□□□ 0.52
CIRBP-209ENST00000586555 TRMT5Q32P41 509 aaKnown RBP18.32■□□□□ 0.52
CIRBP-209ENST00000586555 CGB2Q6NT52 195 aa18.32■□□□□ 0.52
CIRBP-209ENST00000586555 TFAP2EQ6VUC0 442 aa18.32■□□□□ 0.52
CIRBP-209ENST00000586555 STAC2Q6ZMT1 411 aa18.32■□□□□ 0.52
CIRBP-209ENST00000586555 ARMC8Q8IUR7 673 aa18.32■□□□□ 0.52
CIRBP-209ENST00000586555 ZNF100Q8IYN0 542 aa18.32■□□□□ 0.52
CIRBP-209ENST00000586555 C10orf111Q8N326 155 aa18.32■□□□□ 0.52
CIRBP-209ENST00000586555 PCYOX1LQ8NBM8 494 aa18.32■□□□□ 0.52
CIRBP-209ENST00000586555 STEAP2Q8NFT2 490 aa18.32■□□□□ 0.52
CIRBP-209ENST00000586555 USB1Q9BQ65 265 aaKnown RBP18.32■□□□□ 0.52
CIRBP-209ENST00000586555 TAPBPLQ9BX59 468 aa18.32■□□□□ 0.52
CIRBP-209ENST00000586555 PLEKHA6Q9Y2H5 1048 aa18.32■□□□□ 0.52
CIRBP-209ENST00000586555 CHST2Q9Y4C5 530 aa18.32■□□□□ 0.52
CIRBP-209ENST00000586555 PSMB1P20618 241 aaKnown RBP18.31■□□□□ 0.52
CIRBP-209ENST00000586555 FPR1P21462 350 aa18.31■□□□□ 0.52
CIRBP-209ENST00000586555 OR3A2P47893 321 aa18.31■□□□□ 0.52
CIRBP-209ENST00000586555 NCALDP61601 193 aa18.31■□□□□ 0.52
CIRBP-209ENST00000586555 P2RY6Q15077 328 aa18.31■□□□□ 0.52
CIRBP-209ENST00000586555 ADRM1Q16186 407 aa18.31■□□□□ 0.52
CIRBP-209ENST00000586555 INTS11Q5TA45 600 aaKnown RBP18.31■□□□□ 0.52
CIRBP-209ENST00000586555 ABLIM2Q6H8Q1 611 aa18.31■□□□□ 0.52
CIRBP-209ENST00000586555 DNAJA3Q96EY1 480 aa18.31■□□□□ 0.52
CIRBP-209ENST00000586555 ALPK1Q96QP1 1244 aa18.31■□□□□ 0.52
CIRBP-209ENST00000586555 TRIM2Q9C040 744 aa18.31■□□□□ 0.52
CIRBP-209ENST00000586555 KAT8Q9H7Z6 458 aaKnown RBP18.31■□□□□ 0.52
CIRBP-209ENST00000586555 PLEKHF2Q9H8W4 249 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms