RNA–Protein interactions for RNA: ENST00000585749.5

SDF2-203, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 823 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-203ENST00000585749 CCDC167Q9P0B6 97 aa8.25□□□□□ -1.09
SDF2-203ENST00000585749 ROS1P08922 2347 aa8.25□□□□□ -1.09
SDF2-203ENST00000585749 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.25□□□□□ -1.099e-12■■■■□ 24.7
SDF2-203ENST00000585749 A0A096LPI6 279 aa8.24□□□□□ -1.09
SDF2-203ENST00000585749 NR5A2O00482 541 aa8.24□□□□□ -1.09
SDF2-203ENST00000585749 EFNA2O43921 213 aa8.24□□□□□ -1.09
SDF2-203ENST00000585749 SS18L1O75177 396 aaPredicted RBP8.24□□□□□ -1.09
SDF2-203ENST00000585749 BCAS1O75363 584 aaPredicted RBP8.24□□□□□ -1.09
SDF2-203ENST00000585749 CYP7B1O75881 506 aa8.24□□□□□ -1.09
SDF2-203ENST00000585749 SYNGR4O95473 234 aa8.24□□□□□ -1.09
SDF2-203ENST00000585749 FAM107AO95990 144 aa8.24□□□□□ -1.09
SDF2-203ENST00000585749 TP53P04637 393 aaPredicted RBP8.24□□□□□ -1.09
SDF2-203ENST00000585749 DBIP07108 87 aaKnown RBP8.24□□□□□ -1.09
SDF2-203ENST00000585749 FAM157CP0CG43 387 aa8.24□□□□□ -1.09
SDF2-203ENST00000585749 NR2F1P10589 423 aa8.24□□□□□ -1.09
SDF2-203ENST00000585749 ETFAP13804 333 aa8.24□□□□□ -1.09
SDF2-203ENST00000585749 CRYGSP22914 178 aa8.24□□□□□ -1.09
SDF2-203ENST00000585749 LOXP28300 417 aaPredicted RBP8.24□□□□□ -1.09
SDF2-203ENST00000585749 SHC1P29353 583 aa8.24□□□□□ -1.09
SDF2-203ENST00000585749 SFTPDP35247 375 aa8.24□□□□□ -1.09
SDF2-203ENST00000585749 CRATP43155 626 aa8.24□□□□□ -1.09
SDF2-203ENST00000585749 MAP2K3P46734 347 aa8.24□□□□□ -1.09
SDF2-203ENST00000585749 SLC6A8P48029 635 aa8.24□□□□□ -1.09
SDF2-203ENST00000585749 SEC24CP53992 1094 aa8.24□□□□□ -1.09
SDF2-203ENST00000585749 CRISP3P54108 245 aa8.24□□□□□ -1.09
SDF2-203ENST00000585749 SESN3P58005 492 aa8.24□□□□□ -1.09
SDF2-203ENST00000585749 DSTNP60981 165 aa8.24□□□□□ -1.09
SDF2-203ENST00000585749 TNP2Q05952 138 aa8.24□□□□□ -1.09
SDF2-203ENST00000585749 RUNX1T1Q06455 604 aa8.24□□□□□ -1.09
SDF2-203ENST00000585749 FADDQ13158 208 aa8.24□□□□□ -1.09
SDF2-203ENST00000585749 GNA13Q14344 377 aa8.24□□□□□ -1.09
SDF2-203ENST00000585749 MAPK11Q15759 364 aa8.24□□□□□ -1.09
SDF2-203ENST00000585749 ZNF239Q16600 458 aaKnown RBP8.24□□□□□ -1.09
SDF2-203ENST00000585749 LRIF1Q5T3J3 769 aa8.24□□□□□ -1.09
SDF2-203ENST00000585749 METTL21CQ5VZV1 264 aa8.24□□□□□ -1.09
SDF2-203ENST00000585749 SLC2A7Q6PXP3 512 aa8.24□□□□□ -1.09
SDF2-203ENST00000585749 SPATA21Q7Z572 469 aa8.24□□□□□ -1.09
SDF2-203ENST00000585749 BTLAQ7Z6A9 289 aa8.24□□□□□ -1.09
SDF2-203ENST00000585749 CNEP1R1Q8N9A8 125 aa8.24□□□□□ -1.09
SDF2-203ENST00000585749 OR6K3Q8NGY3 331 aa8.24□□□□□ -1.09
SDF2-203ENST00000585749 RNF128Q8TEB7 428 aa8.24□□□□□ -1.09
SDF2-203ENST00000585749 SLC25A43Q8WUT9 341 aaPredicted RBP8.24□□□□□ -1.09
SDF2-203ENST00000585749 WDR60Q8WVS4 1066 aa8.24□□□□□ -1.09
SDF2-203ENST00000585749 CPNE4Q96A23 557 aaPredicted RBP8.24□□□□□ -1.09
SDF2-203ENST00000585749 ZNF524Q96C55 264 aa8.24□□□□□ -1.09
SDF2-203ENST00000585749 SPDL1Q96EA4 605 aa8.24□□□□□ -1.09
SDF2-203ENST00000585749 WFIKKN1Q96NZ8 548 aa8.24□□□□□ -1.09
SDF2-203ENST00000585749 PRRG4Q9BZD6 226 aa8.24□□□□□ -1.09
SDF2-203ENST00000585749 RAD21L1Q9H4I0 556 aa8.24□□□□□ -1.09
SDF2-203ENST00000585749 RABEP2Q9H5N1 569 aa8.24□□□□□ -1.09
SDF2-203ENST00000585749 ZNF385DQ9H6B1 395 aa8.24□□□□□ -1.09
SDF2-203ENST00000585749 COQ10BQ9H8M1 238 aa8.24□□□□□ -1.09
SDF2-203ENST00000585749 MTHFD2LQ9H903 347 aaPredicted RBP8.24□□□□□ -1.09
SDF2-203ENST00000585749 SLC52A3Q9NQ40 469 aa8.24□□□□□ -1.09
SDF2-203ENST00000585749 TIGARQ9NQ88 270 aa8.24□□□□□ -1.09
SDF2-203ENST00000585749 YAE1D1Q9NRH1 226 aa8.24□□□□□ -1.09
SDF2-203ENST00000585749 GLRX2Q9NS18 164 aa8.24□□□□□ -1.09
SDF2-203ENST00000585749 ACER3Q9NUN7 267 aa8.24□□□□□ -1.09
SDF2-203ENST00000585749 KLHL28Q9NXS3 571 aa8.24□□□□□ -1.09
SDF2-203ENST00000585749 DCTN4Q9UJW0 460 aa8.24□□□□□ -1.09
SDF2-203ENST00000585749 EMC9Q9Y3B6 208 aa8.24□□□□□ -1.09
SDF2-203ENST00000585749 PCDHB14Q9Y5E9 798 aa8.24□□□□□ -1.09
SDF2-203ENST00000585749 GMEB1Q9Y692 573 aa8.24□□□□□ -1.09
SDF2-203ENST00000585749 TRBV5-3A0A0A0MS03 114 aa8.23□□□□□ -1.09
SDF2-203ENST00000585749 TMEM247A6NEH6 219 aa8.23□□□□□ -1.09
SDF2-203ENST00000585749 CLDN24A6NM45 220 aa8.23□□□□□ -1.09
SDF2-203ENST00000585749 CLIC1O00299 241 aa8.23□□□□□ -1.09
SDF2-203ENST00000585749 FAAHO00519 579 aa8.23□□□□□ -1.09
SDF2-203ENST00000585749 SMNDC1O75940 238 aaKnown RBP eCLIP8.23□□□□□ -1.09
SDF2-203ENST00000585749 PLGP00747 810 aaPredicted RBP8.23□□□□□ -1.09
SDF2-203ENST00000585749 CGAP01215 116 aa8.23□□□□□ -1.09
SDF2-203ENST00000585749 OPN1LWP04000 364 aa8.23□□□□□ -1.09
SDF2-203ENST00000585749 BCHEP06276 602 aa8.23□□□□□ -1.09
SDF2-203ENST00000585749 TFPTP0C1Z6 253 aa8.23□□□□□ -1.09
SDF2-203ENST00000585749 PABPC4LP0CB38 370 aaKnown RBP8.23□□□□□ -1.09
SDF2-203ENST00000585749 BMP4P12644 408 aa8.23□□□□□ -1.09
SDF2-203ENST00000585749 IL7RP16871 459 aa8.23□□□□□ -1.09
SDF2-203ENST00000585749 PPIBP23284 216 aaKnown RBP8.23□□□□□ -1.09
SDF2-203ENST00000585749 SLC7A1P30825 629 aa8.23□□□□□ -1.09
SDF2-203ENST00000585749 CPOXP36551 454 aa8.23□□□□□ -1.09
SDF2-203ENST00000585749 ATP5J2P56134 94 aa8.23□□□□□ -1.09
SDF2-203ENST00000585749 CARD18P57730 90 aa8.23□□□□□ -1.09
SDF2-203ENST00000585749 SIRPAP78324 504 aa8.23□□□□□ -1.09
SDF2-203ENST00000585749 MERTKQ12866 999 aa8.23□□□□□ -1.09
SDF2-203ENST00000585749 RNPS1Q15287 305 aaKnown RBP8.23□□□□□ -1.09
SDF2-203ENST00000585749 RGNQ15493 299 aa8.23□□□□□ -1.09
SDF2-203ENST00000585749 TMEM176BQ3YBM2 270 aaPredicted RBP8.23□□□□□ -1.09
SDF2-203ENST00000585749 LIN52Q52LA3 116 aa8.23□□□□□ -1.09
SDF2-203ENST00000585749 AGKQ53H12 422 aa8.23□□□□□ -1.09
SDF2-203ENST00000585749 MRPL2Q5T653 305 aaKnown RBP8.23□□□□□ -1.09
SDF2-203ENST00000585749 GKAP1Q5VSY0 366 aaPredicted RBP8.23□□□□□ -1.09
SDF2-203ENST00000585749 PRAMEF8Q5VWM4 474 aa8.23□□□□□ -1.09
SDF2-203ENST00000585749 PRAMEF7Q5VXH5 474 aa8.23□□□□□ -1.09
SDF2-203ENST00000585749 GTF2IRD2BQ6EKJ0 949 aa8.23□□□□□ -1.09
SDF2-203ENST00000585749 PPP4R4Q6NUP7 873 aa8.23□□□□□ -1.09
SDF2-203ENST00000585749 PLEKHM3Q6ZWE6 761 aa8.23□□□□□ -1.09
SDF2-203ENST00000585749 GRINAQ7Z429 371 aa8.23□□□□□ -1.09
SDF2-203ENST00000585749 HMGN2P46Q86SG4 172 aa8.23□□□□□ -1.09
SDF2-203ENST00000585749 GTF2IRD2Q86UP8 949 aa8.23□□□□□ -1.09
SDF2-203ENST00000585749 PEX5LQ8IYB4 626 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms