RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 B4DXG7 233 aa13.76□□□□□ -0.21
CDK5RAP3-236ENST00000584991 B4E171 279 aa13.76□□□□□ -0.21
CDK5RAP3-236ENST00000584991 MEN1O00255 615 aa13.76□□□□□ -0.21
CDK5RAP3-236ENST00000584991 CBX7O95931 251 aa13.76□□□□□ -0.21
CDK5RAP3-236ENST00000584991 MT-CO3P00414 261 aa13.76□□□□□ -0.21
CDK5RAP3-236ENST00000584991 ZGLP1P0C6A0 271 aa13.76□□□□□ -0.21
CDK5RAP3-236ENST00000584991 PRKAR1AP10644 381 aa13.76□□□□□ -0.21
CDK5RAP3-236ENST00000584991 S1PR1P21453 382 aa13.76□□□□□ -0.21
CDK5RAP3-236ENST00000584991 MYL9P24844 172 aa13.76□□□□□ -0.21
CDK5RAP3-236ENST00000584991 TRHRP34981 398 aaPredicted RBP13.76□□□□□ -0.21
CDK5RAP3-236ENST00000584991 TSPAN7P41732 249 aa13.76□□□□□ -0.21
CDK5RAP3-236ENST00000584991 NR4A2P43354 598 aa13.76□□□□□ -0.21
CDK5RAP3-236ENST00000584991 PGDP52209 483 aa13.76□□□□□ -0.21
CDK5RAP3-236ENST00000584991 ZNF155Q12901 538 aaPredicted RBP13.76□□□□□ -0.21
CDK5RAP3-236ENST00000584991 ZNF267Q14586 743 aaPredicted RBP13.76□□□□□ -0.21
CDK5RAP3-236ENST00000584991 QPRTQ15274 297 aa13.76□□□□□ -0.21
CDK5RAP3-236ENST00000584991 LCN10Q6JVE6 187 aa13.76□□□□□ -0.21
CDK5RAP3-236ENST00000584991 SLC16A11Q8NCK7 471 aa13.76□□□□□ -0.21
CDK5RAP3-236ENST00000584991 OR52R1Q8NGF1 315 aa13.76□□□□□ -0.21
CDK5RAP3-236ENST00000584991 OR4Q3Q8NH05 313 aa13.76□□□□□ -0.21
CDK5RAP3-236ENST00000584991 ENKURQ8TC29 256 aa13.76□□□□□ -0.21
CDK5RAP3-236ENST00000584991 PELOQ9BRX2 385 aaKnown RBP13.76□□□□□ -0.21
CDK5RAP3-236ENST00000584991 TGIF2Q9GZN2 237 aa13.76□□□□□ -0.21
CDK5RAP3-236ENST00000584991 VN1R1Q9GZP7 353 aa13.76□□□□□ -0.21
CDK5RAP3-236ENST00000584991 C11orf54Q9H0W9 315 aaPredicted RBP13.76□□□□□ -0.21
CDK5RAP3-236ENST00000584991 RBFOX1Q9NWB1 397 aaKnown RBP13.76□□□□□ -0.21
CDK5RAP3-236ENST00000584991 CNIH4Q9P003 139 aa13.76□□□□□ -0.21
CDK5RAP3-236ENST00000584991 TNFRSF10DQ9UBN6 386 aa13.76□□□□□ -0.21
CDK5RAP3-236ENST00000584991 KLHL21Q9UJP4 597 aa13.76□□□□□ -0.21
CDK5RAP3-236ENST00000584991 GPR52Q9Y2T5 361 aa13.76□□□□□ -0.21
CDK5RAP3-236ENST00000584991 WDR45Q9Y484 360 aa13.76□□□□□ -0.21
CDK5RAP3-236ENST00000584991 IGLV3-12A0A075B6K2 115 aa13.76□□□□□ -0.21
CDK5RAP3-236ENST00000584991 A8MUA0 341 aa13.76□□□□□ -0.21
CDK5RAP3-236ENST00000584991 ONECUT2O95948 504 aa13.76□□□□□ -0.21
CDK5RAP3-236ENST00000584991 AK1P00568 194 aa13.76□□□□□ -0.21
CDK5RAP3-236ENST00000584991 YES1P07947 543 aa13.76□□□□□ -0.21
CDK5RAP3-236ENST00000584991 CLEC2LP0C7M8 214 aa13.76□□□□□ -0.21
CDK5RAP3-236ENST00000584991 SLC2A2P11168 524 aaPredicted RBP13.76□□□□□ -0.21
CDK5RAP3-236ENST00000584991 SSTR4P31391 388 aa13.76□□□□□ -0.21
CDK5RAP3-236ENST00000584991 MTNR1BP49286 362 aa13.76□□□□□ -0.21
CDK5RAP3-236ENST00000584991 LSM11P83369 360 aaKnown RBP eCLIP13.76□□□□□ -0.213e-9■■□□□ 12.5
CDK5RAP3-236ENST00000584991 CDK10Q15131 360 aa13.76□□□□□ -0.21
CDK5RAP3-236ENST00000584991 NSDHLQ15738 373 aa13.76□□□□□ -0.21
CDK5RAP3-236ENST00000584991 TRIQKQ629K1 86 aa13.76□□□□□ -0.21
CDK5RAP3-236ENST00000584991 RAB11FIP2Q7L804 512 aa13.76□□□□□ -0.21
CDK5RAP3-236ENST00000584991 OLIG3Q7RTU3 272 aa13.76□□□□□ -0.21
CDK5RAP3-236ENST00000584991 TMEM151BQ8IW70 566 aa13.76□□□□□ -0.21
CDK5RAP3-236ENST00000584991 NRMQ8IXM6 262 aa13.76□□□□□ -0.21
CDK5RAP3-236ENST00000584991 NEIL3Q8TAT5 605 aa13.76□□□□□ -0.21
CDK5RAP3-236ENST00000584991 OTULINQ96BN8 352 aa13.76□□□□□ -0.21
CDK5RAP3-236ENST00000584991 ZG16BQ96DA0 208 aa13.76□□□□□ -0.21
CDK5RAP3-236ENST00000584991 TM9SF2Q99805 663 aa13.76□□□□□ -0.21
CDK5RAP3-236ENST00000584991 ATF6BQ99941 703 aa13.76□□□□□ -0.21
CDK5RAP3-236ENST00000584991 PIGUQ9H490 435 aa13.76□□□□□ -0.21
CDK5RAP3-236ENST00000584991 AKIRIN1Q9H9L7 192 aaPredicted RBP13.76□□□□□ -0.21
CDK5RAP3-236ENST00000584991 DDX28Q9NUL7 540 aaKnown RBP13.76□□□□□ -0.21
CDK5RAP3-236ENST00000584991 ERVK-19Q9WJR5 959 aa13.76□□□□□ -0.21
CDK5RAP3-236ENST00000584991 TMEM5Q9Y2B1 443 aa13.76□□□□□ -0.21
CDK5RAP3-236ENST00000584991 GPR55Q9Y2T6 319 aaPredicted RBP13.76□□□□□ -0.21
CDK5RAP3-236ENST00000584991 MUC6Q6W4X9 2439 aa13.75□□□□□ -0.21
CDK5RAP3-236ENST00000584991 PMS2P1A4D2B8 440 aa13.75□□□□□ -0.21
CDK5RAP3-236ENST00000584991 TRAPPC13A5PLN9 417 aa13.75□□□□□ -0.21
CDK5RAP3-236ENST00000584991 C17orf105B2RV13 164 aa13.75□□□□□ -0.21
CDK5RAP3-236ENST00000584991 FAM25AB3EWG3 89 aa13.75□□□□□ -0.21
CDK5RAP3-236ENST00000584991 FAM25CB3EWG5 89 aa13.75□□□□□ -0.21
CDK5RAP3-236ENST00000584991 FAM25GB3EWG6 89 aa13.75□□□□□ -0.21
CDK5RAP3-236ENST00000584991 GABRPO00591 440 aa13.75□□□□□ -0.21
CDK5RAP3-236ENST00000584991 PLA2G10O15496 165 aa13.75□□□□□ -0.21
CDK5RAP3-236ENST00000584991 DBIP07108 87 aaKnown RBP13.75□□□□□ -0.21
CDK5RAP3-236ENST00000584991 PAICSP22234 425 aaKnown RBP13.75□□□□□ -0.21
CDK5RAP3-236ENST00000584991 F8A1P23610 371 aa13.75□□□□□ -0.21
CDK5RAP3-236ENST00000584991 AZGP1P25311 298 aaKnown RBP13.75□□□□□ -0.21
CDK5RAP3-236ENST00000584991 GALNSP34059 522 aa13.75□□□□□ -0.21
CDK5RAP3-236ENST00000584991 TAB1Q15750 504 aa13.75□□□□□ -0.21
CDK5RAP3-236ENST00000584991 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.75□□□□□ -0.212e-6■□□□□ 11.2
CDK5RAP3-236ENST00000584991 TBRG1Q3YBR2 411 aa13.75□□□□□ -0.21
CDK5RAP3-236ENST00000584991 EXOSC6Q5RKV6 272 aaKnown RBP13.75□□□□□ -0.21
CDK5RAP3-236ENST00000584991 SLC30A6Q6NXT4 461 aa13.75□□□□□ -0.21
CDK5RAP3-236ENST00000584991 ZNF322Q6U7Q0 402 aaPredicted RBP13.75□□□□□ -0.21
CDK5RAP3-236ENST00000584991 PLET1Q6UQ28 207 aa13.75□□□□□ -0.21
CDK5RAP3-236ENST00000584991 OVCH1Q7RTY7 1134 aa13.75□□□□□ -0.21
CDK5RAP3-236ENST00000584991 GLRX5Q86SX6 157 aa13.75□□□□□ -0.21
CDK5RAP3-236ENST00000584991 LHFPL3Q86UP9 236 aa13.75□□□□□ -0.21
CDK5RAP3-236ENST00000584991 NKAIN4Q8IVV8 208 aa13.75□□□□□ -0.21
CDK5RAP3-236ENST00000584991 ACBD7Q8N6N7 88 aa13.75□□□□□ -0.21
CDK5RAP3-236ENST00000584991 OR52L1Q8NGH7 329 aa13.75□□□□□ -0.21
CDK5RAP3-236ENST00000584991 CDS1Q92903 461 aa13.75□□□□□ -0.21
CDK5RAP3-236ENST00000584991 KCNJ15Q99712 375 aa13.75□□□□□ -0.21
CDK5RAP3-236ENST00000584991 ULBP3Q9BZM4 244 aa13.75□□□□□ -0.21
CDK5RAP3-236ENST00000584991 QRSL1Q9H0R6 528 aaKnown RBP13.75□□□□□ -0.21
CDK5RAP3-236ENST00000584991 SLA2Q9H6Q3 261 aa13.75□□□□□ -0.21
CDK5RAP3-236ENST00000584991 CTPS2Q9NRF8 586 aa13.75□□□□□ -0.21
CDK5RAP3-236ENST00000584991 POLE3Q9NRF9 147 aa13.75□□□□□ -0.21
CDK5RAP3-236ENST00000584991 B3GALT1Q9Y5Z6 326 aa13.75□□□□□ -0.21
CDK5RAP3-236ENST00000584991 TCRBV16S1A1N1A0A5B0 115 aa13.74□□□□□ -0.21
CDK5RAP3-236ENST00000584991 FCMRO60667 390 aa13.74□□□□□ -0.21
CDK5RAP3-236ENST00000584991 RCBTB2O95199 551 aa13.74□□□□□ -0.21
CDK5RAP3-236ENST00000584991 GUSBP08236 651 aa13.74□□□□□ -0.21
CDK5RAP3-236ENST00000584991 CELP19835 753 aa13.74□□□□□ -0.21
CDK5RAP3-236ENST00000584991 RPS4Y1P22090 263 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms