RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-222	ENST00000583732	POLE3	Q9NRF9	147 aa		13.3	□□□□□ -0.28
SREBF1-222	ENST00000583732	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	13.3	□□□□□ -0.28
SREBF1-222	ENST00000583732	TMEM181	Q9P2C4	612 aa		13.3	□□□□□ -0.28
SREBF1-222	ENST00000583732	UPB1	Q9UBR1	384 aa		13.3	□□□□□ -0.28
SREBF1-222	ENST00000583732	MALT1	Q9UDY8	824 aa		13.3	□□□□□ -0.28
SREBF1-222	ENST00000583732		A0A096LNT2	108 aa		13.29	□□□□□ -0.28
SREBF1-222	ENST00000583732	TMED7-TICAM2	A0A0A6YYA0	188 aa		13.29	□□□□□ -0.28
SREBF1-222	ENST00000583732	PRSS51	A0A1B0GVH4	220 aa		13.29	□□□□□ -0.28
SREBF1-222	ENST00000583732	TYROBP	O43914	113 aa		13.29	□□□□□ -0.28
SREBF1-222	ENST00000583732	SCN2B	O60939	215 aa		13.29	□□□□□ -0.28
SREBF1-222	ENST00000583732	IMPDH2	P12268	514 aa		13.29	□□□□□ -0.28
SREBF1-222	ENST00000583732	ZNF16	P17020	682 aa	Predicted RBP	13.29	□□□□□ -0.28
SREBF1-222	ENST00000583732	SLC16A1	P53985	500 aa		13.29	□□□□□ -0.28
SREBF1-222	ENST00000583732	KCNJ10	P78508	379 aa		13.29	□□□□□ -0.28
SREBF1-222	ENST00000583732	SLC25A3	Q00325	362 aa		13.29	□□□□□ -0.28
SREBF1-222	ENST00000583732	SYPL1	Q16563	259 aa		13.29	□□□□□ -0.28
SREBF1-222	ENST00000583732	SMU1	Q2TAY7	513 aa		13.29	□□□□□ -0.28
SREBF1-222	ENST00000583732	ANXA8L1	Q5VT79	327 aa		13.29	□□□□□ -0.28
SREBF1-222	ENST00000583732	ANKFN1	Q8N957	763 aa		13.29	□□□□□ -0.28
SREBF1-222	ENST00000583732	VPS37A	Q8NEZ2	397 aa		13.29	□□□□□ -0.28
SREBF1-222	ENST00000583732	OR10H5	Q8NGA6	315 aa		13.29	□□□□□ -0.28
SREBF1-222	ENST00000583732	NEURL3	Q96EH8	262 aa		13.29	□□□□□ -0.28
SREBF1-222	ENST00000583732	INPP5K	Q9BT40	448 aa		13.29	□□□□□ -0.28
SREBF1-222	ENST00000583732	SAP130	Q9H0E3	1048 aa		13.29	□□□□□ -0.28
SREBF1-222	ENST00000583732	EXOSC3	Q9NQT5	275 aa	Known RBP	13.29	□□□□□ -0.28
SREBF1-222	ENST00000583732	TMED7	Q9Y3B3	224 aa		13.29	□□□□□ -0.28
SREBF1-222	ENST00000583732	YLPM1	P49750	1951 aa	Known RBP	13.29	□□□□□ -0.28
SREBF1-222	ENST00000583732	DNPH1	O43598	174 aa		13.28	□□□□□ -0.28
SREBF1-222	ENST00000583732	LY6H	O94772	140 aa		13.28	□□□□□ -0.28
SREBF1-222	ENST00000583732	SERPINE1	P05121	402 aa		13.28	□□□□□ -0.28
SREBF1-222	ENST00000583732	CDH2	P19022	906 aa	Predicted RBP	13.28	□□□□□ -0.28
SREBF1-222	ENST00000583732	ABCE1	P61221	599 aa	Known RBP	13.28	□□□□□ -0.28
SREBF1-222	ENST00000583732	CASP8	Q14790	479 aa		13.28	□□□□□ -0.28
SREBF1-222	ENST00000583732	FAM174B	Q3ZCQ3	159 aa		13.28	□□□□□ -0.28
SREBF1-222	ENST00000583732	TSPO2	Q5TGU0	170 aa		13.28	□□□□□ -0.28
SREBF1-222	ENST00000583732	OR7E24	Q6IFN5	339 aa		13.28	□□□□□ -0.28
SREBF1-222	ENST00000583732	RNF130	Q86XS8	419 aa		13.28	□□□□□ -0.28
SREBF1-222	ENST00000583732	WDR31	Q8NA23	367 aa		13.28	□□□□□ -0.28
SREBF1-222	ENST00000583732	FAM168A	Q92567	244 aa		13.28	□□□□□ -0.28
SREBF1-222	ENST00000583732	ZBTB9	Q96C00	473 aa		13.28	□□□□□ -0.28
SREBF1-222	ENST00000583732	DDIT4L	Q96D03	193 aa		13.28	□□□□□ -0.28
SREBF1-222	ENST00000583732	MUS81	Q96NY9	551 aa		13.28	□□□□□ -0.28
SREBF1-222	ENST00000583732	ZIM3	Q96PE6	472 aa		13.28	□□□□□ -0.28
SREBF1-222	ENST00000583732	TNFRSF13C	Q96RJ3	184 aa		13.28	□□□□□ -0.28
SREBF1-222	ENST00000583732	KCNK17	Q96T54	332 aa		13.28	□□□□□ -0.28
SREBF1-222	ENST00000583732	NAA11	Q9BSU3	229 aa	Predicted RBP	13.28	□□□□□ -0.28
SREBF1-222	ENST00000583732	NUF2	Q9BZD4	464 aa		13.28	□□□□□ -0.28
SREBF1-222	ENST00000583732	ROPN1B	Q9BZX4	212 aa	Predicted RBP	13.28	□□□□□ -0.28
SREBF1-222	ENST00000583732	C20orf27	Q9GZN8	174 aa		13.28	□□□□□ -0.28
SREBF1-222	ENST00000583732	ROPN1	Q9HAT0	212 aa	Predicted RBP	13.28	□□□□□ -0.28
SREBF1-222	ENST00000583732	SLC17A5	Q9NRA2	495 aa		13.28	□□□□□ -0.28
SREBF1-222	ENST00000583732	SLC7A10	Q9NS82	523 aa		13.28	□□□□□ -0.28
SREBF1-222	ENST00000583732	OSGIN1	Q9UJX0	560 aa		13.28	□□□□□ -0.28
SREBF1-222	ENST00000583732	SLC9A8	Q9Y2E8	581 aa		13.28	□□□□□ -0.28
SREBF1-222	ENST00000583732	FLVCR1	Q9Y5Y0	555 aa		13.28	□□□□□ -0.28
SREBF1-222	ENST00000583732	HEATR1	Q9H583	2144 aa	Known RBP	13.28	□□□□□ -0.28
SREBF1-222	ENST00000583732	ZC3H12D	A2A288	527 aa	Known RBP	13.27	□□□□□ -0.29
SREBF1-222	ENST00000583732	ATP6V1G2-DDX39B	F2Z307	99 aa		13.27	□□□□□ -0.29
SREBF1-222	ENST00000583732	HMGN4	O00479	90 aa		13.27	□□□□□ -0.29
SREBF1-222	ENST00000583732	CHRM4	P08173	479 aa		13.27	□□□□□ -0.29
SREBF1-222	ENST00000583732	GUSB	P08236	651 aa		13.27	□□□□□ -0.29
SREBF1-222	ENST00000583732	MYZAP	P0CAP1	466 aa		13.27	□□□□□ -0.29
SREBF1-222	ENST00000583732	SLC25A16	P16260	332 aa		13.27	□□□□□ -0.29
SREBF1-222	ENST00000583732	TACR3	P29371	465 aa		13.27	□□□□□ -0.29
SREBF1-222	ENST00000583732	S100A3	P33764	101 aa		13.27	□□□□□ -0.29
SREBF1-222	ENST00000583732	CLK1	P49759	484 aa	Known RBP	13.27	□□□□□ -0.29
SREBF1-222	ENST00000583732	POLR2H	P52434	150 aa	Known RBP	13.27	□□□□□ -0.29
SREBF1-222	ENST00000583732	DSCR9	P59020	149 aa		13.27	□□□□□ -0.29
SREBF1-222	ENST00000583732	SLC35A1	P78382	337 aa		13.27	□□□□□ -0.29
SREBF1-222	ENST00000583732	LOXL1	Q08397	574 aa	Predicted RBP	13.27	□□□□□ -0.29
SREBF1-222	ENST00000583732	PNPT1	Q8TCS8	783 aa	Known RBP	13.27	□□□□□ -0.29
SREBF1-222	ENST00000583732	WDR60	Q8WVS4	1066 aa		13.27	□□□□□ -0.29
SREBF1-222	ENST00000583732	OIT3	Q8WWZ8	545 aa		13.27	□□□□□ -0.29
SREBF1-222	ENST00000583732	TESC	Q96BS2	214 aa		13.27	□□□□□ -0.29
SREBF1-222	ENST00000583732	AMDHD2	Q9Y303	409 aa		13.27	□□□□□ -0.29
SREBF1-222	ENST00000583732	RAP2C	Q9Y3L5	183 aa		13.27	□□□□□ -0.29
SREBF1-222	ENST00000583732	COL6A5	A8TX70	2615 aa		13.27	□□□□□ -0.29
SREBF1-222	ENST00000583732	ALPK2	Q86TB3	2170 aa		13.27	□□□□□ -0.29
SREBF1-222	ENST00000583732	ELOA3D	A6NLF2	546 aa	Predicted RBP	13.26	□□□□□ -0.29
SREBF1-222	ENST00000583732		E9PBE3	544 aa		13.26	□□□□□ -0.29
SREBF1-222	ENST00000583732		H7C417	338 aa		13.26	□□□□□ -0.29
SREBF1-222	ENST00000583732	PDLIM1	O00151	329 aa		13.26	□□□□□ -0.29
SREBF1-222	ENST00000583732	PHF1	O43189	567 aa	Predicted RBP	13.26	□□□□□ -0.29
SREBF1-222	ENST00000583732	GSN	P06396	782 aa		13.26	□□□□□ -0.29
SREBF1-222	ENST00000583732	LBP	P18428	481 aa		13.26	□□□□□ -0.29
SREBF1-222	ENST00000583732	BGN	P21810	368 aa		13.26	□□□□□ -0.29
SREBF1-222	ENST00000583732	FKBP2	P26885	142 aa	Known RBP	13.26	□□□□□ -0.29
SREBF1-222	ENST00000583732	CDKN2C	P42773	168 aa		13.26	□□□□□ -0.29
SREBF1-222	ENST00000583732	HTR3A	P46098	478 aa		13.26	□□□□□ -0.29
SREBF1-222	ENST00000583732	SLC1A6	P48664	564 aa		13.26	□□□□□ -0.29
SREBF1-222	ENST00000583732	RPL14	P50914	215 aa	Known RBP	13.26	□□□□□ -0.29
SREBF1-222	ENST00000583732	CLNS1A	P54105	237 aa	Known RBP	13.26	□□□□□ -0.29
SREBF1-222	ENST00000583732	H3F3A	P84243	136 aa		13.26	□□□□□ -0.29
SREBF1-222	ENST00000583732	KRT71	Q3SY84	523 aa		13.26	□□□□□ -0.29
SREBF1-222	ENST00000583732	ELOA3B	Q3SY89	546 aa		13.26	□□□□□ -0.29
SREBF1-222	ENST00000583732	OTUD3	Q5T2D3	398 aa	Predicted RBP	13.26	□□□□□ -0.29
SREBF1-222	ENST00000583732	ZNF544	Q6NX49	715 aa		13.26	□□□□□ -0.29
SREBF1-222	ENST00000583732	ELOA3	Q8NG57	546 aa		13.26	□□□□□ -0.29
SREBF1-222	ENST00000583732	C10orf105	Q8TEF2	133 aa		13.26	□□□□□ -0.29
SREBF1-222	ENST00000583732	NANOS1	Q8WY41	292 aa	Known RBP	13.26	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms