RNA–Protein interactions for RNA: ENST00000583282.5

GGA3-216, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-216ENST00000583282 B3GNT6Q6ZMB0 384 aa12.59□□□□□ -0.39
GGA3-216ENST00000583282 CYP4Z1Q86W10 505 aa12.59□□□□□ -0.39
GGA3-216ENST00000583282 UTP4Q969X6 686 aaKnown RBP12.59□□□□□ -0.39
GGA3-216ENST00000583282 RSRC1Q96IZ7 334 aaKnown RBP12.59□□□□□ -0.39
GGA3-216ENST00000583282 A4GNTQ9UNA3 340 aa12.59□□□□□ -0.39
GGA3-216ENST00000583282 AURKCQ9UQB9 309 aa12.59□□□□□ -0.39
GGA3-216ENST00000583282 ENPP4Q9Y6X5 453 aa12.59□□□□□ -0.39
GGA3-216ENST00000583282 IGKV1D-42A0A075B6H8 117 aa12.58□□□□□ -0.4
GGA3-216ENST00000583282 SLC22A20A6NK97 555 aa12.58□□□□□ -0.4
GGA3-216ENST00000583282 LRRTM2O43300 516 aa12.58□□□□□ -0.4
GGA3-216ENST00000583282 ZNF208O43345 1280 aa12.58□□□□□ -0.4
GGA3-216ENST00000583282 LYPD3O95274 346 aa12.58□□□□□ -0.4
GGA3-216ENST00000583282 SYNGR4O95473 234 aa12.58□□□□□ -0.4
GGA3-216ENST00000583282 FUT4P22083 530 aa12.58□□□□□ -0.4
GGA3-216ENST00000583282 IDUAP35475 653 aa12.58□□□□□ -0.4
GGA3-216ENST00000583282 DIO1P49895 249 aa12.58□□□□□ -0.4
GGA3-216ENST00000583282 NUP107P57740 925 aa12.58□□□□□ -0.4
GGA3-216ENST00000583282 OR2B6P58173 313 aa12.58□□□□□ -0.4
GGA3-216ENST00000583282 OR7A5Q15622 319 aa12.58□□□□□ -0.4
GGA3-216ENST00000583282 ZNF239Q16600 458 aaKnown RBP12.58□□□□□ -0.4
GGA3-216ENST00000583282 FGD3Q5JSP0 725 aa12.58□□□□□ -0.4
GGA3-216ENST00000583282 SWT1Q5T5J6 900 aaKnown RBP12.58□□□□□ -0.4
GGA3-216ENST00000583282 C1orf140Q5VVS0 124 aa12.58□□□□□ -0.4
GGA3-216ENST00000583282 ZDHHC21Q8IVQ6 265 aa12.58□□□□□ -0.4
GGA3-216ENST00000583282 NKAIN4Q8IVV8 208 aa12.58□□□□□ -0.4
GGA3-216ENST00000583282 OFCC1Q8IZS5 231 aa12.58□□□□□ -0.4
GGA3-216ENST00000583282 MARVELD2Q8N4S9 558 aa12.58□□□□□ -0.4
GGA3-216ENST00000583282 C9orf106Q8NAJ2 232 aa12.58□□□□□ -0.4
GGA3-216ENST00000583282 FNDC9Q8TBE3 224 aa12.58□□□□□ -0.4
GGA3-216ENST00000583282 TMEM255BQ8WV15 326 aa12.58□□□□□ -0.4
GGA3-216ENST00000583282 PHF3Q92576 2039 aaKnown RBP12.58□□□□□ -0.4
GGA3-216ENST00000583282 FNDC11Q9BVV2 318 aa12.58□□□□□ -0.4
GGA3-216ENST00000583282 PRRG4Q9BZD6 226 aa12.58□□□□□ -0.4
GGA3-216ENST00000583282 MMADHCQ9H3L0 296 aaPredicted RBP12.58□□□□□ -0.4
GGA3-216ENST00000583282 C12orf10Q9HB07 376 aa12.58□□□□□ -0.4
GGA3-216ENST00000583282 NDUFAF4Q9P032 175 aa12.58□□□□□ -0.4
GGA3-216ENST00000583282 CLCF1Q9UBD9 225 aa12.58□□□□□ -0.4
GGA3-216ENST00000583282 RIMS3Q9UJD0 308 aa12.58□□□□□ -0.4
GGA3-216ENST00000583282 MEMO1Q9Y316 297 aa12.58□□□□□ -0.4
GGA3-216ENST00000583282 FAM32AQ9Y421 112 aaKnown RBP12.58□□□□□ -0.4
GGA3-216ENST00000583282 TESMINQ9Y4I5 508 aa12.58□□□□□ -0.4
GGA3-216ENST00000583282 CFAP46Q8IYW2 2715 aa12.58□□□□□ -0.4
GGA3-216ENST00000583282 A0A087WUJ7 227 aa12.57□□□□□ -0.4
GGA3-216ENST00000583282 DHRS12A0PJE2 317 aa12.57□□□□□ -0.4
GGA3-216ENST00000583282 A8MVM7 634 aa12.57□□□□□ -0.4
GGA3-216ENST00000583282 AHRRA9YTQ3 701 aa12.57□□□□□ -0.4
GGA3-216ENST00000583282 SULT2B1O00204 365 aa12.57□□□□□ -0.4
GGA3-216ENST00000583282 ADAMDEC1O15204 470 aa12.57□□□□□ -0.4
GGA3-216ENST00000583282 PIP5K1CO60331 668 aa12.57□□□□□ -0.4
GGA3-216ENST00000583282 IMPDH2P12268 514 aa12.57□□□□□ -0.4
GGA3-216ENST00000583282 CBLP22681 906 aa12.57□□□□□ -0.4
GGA3-216ENST00000583282 GTF2E2P29084 291 aaKnown RBP12.57□□□□□ -0.4
GGA3-216ENST00000583282 IFNA8P32881 189 aa12.57□□□□□ -0.4
GGA3-216ENST00000583282 PTGER4P35408 488 aa12.57□□□□□ -0.4
GGA3-216ENST00000583282 RPS5P46782 204 aaKnown RBP12.57□□□□□ -0.4
GGA3-216ENST00000583282 UGT2B15P54855 530 aa12.57□□□□□ -0.4
GGA3-216ENST00000583282 FAM98BQ52LJ0 330 aaKnown RBP12.57□□□□□ -0.4
GGA3-216ENST00000583282 C4orf17Q53FE4 359 aa12.57□□□□□ -0.4
GGA3-216ENST00000583282 TSEN54Q7Z6J9 526 aaKnown RBP12.57□□□□□ -0.4
GGA3-216ENST00000583282 ADGRG5Q8IZF4 528 aa12.57□□□□□ -0.4
GGA3-216ENST00000583282 GCNT2Q8N0V5 402 aa12.57□□□□□ -0.4
GGA3-216ENST00000583282 C10orf53Q8N6V4 93 aa12.57□□□□□ -0.4
GGA3-216ENST00000583282 PFN4Q8NHR9 129 aa12.57□□□□□ -0.4
GGA3-216ENST00000583282 ZPLD1Q8TCW7 415 aa12.57□□□□□ -0.4
GGA3-216ENST00000583282 ROBO4Q8WZ75 1007 aa12.57□□□□□ -0.4
GGA3-216ENST00000583282 OSTF1Q92882 214 aa12.57□□□□□ -0.4
GGA3-216ENST00000583282 SLC38A4Q969I6 547 aa12.57□□□□□ -0.4
GGA3-216ENST00000583282 KTI12Q96EK9 354 aaPredicted RBP12.57□□□□□ -0.4
GGA3-216ENST00000583282 CCDC120Q96HB5 630 aa12.57□□□□□ -0.4
GGA3-216ENST00000583282 ZNF300Q96RE9 604 aaPredicted RBP12.57□□□□□ -0.4
GGA3-216ENST00000583282 UCN2Q96RP3 112 aa12.57□□□□□ -0.4
GGA3-216ENST00000583282 POLR2J2Q9GZM3 115 aaKnown RBP12.57□□□□□ -0.4
GGA3-216ENST00000583282 POLR2J3Q9H1A7 115 aaKnown RBP12.57□□□□□ -0.4
GGA3-216ENST00000583282 C6orf203Q9P0P8 240 aaPredicted RBP12.57□□□□□ -0.4
GGA3-216ENST00000583282 MCTS1Q9ULC4 181 aaKnown RBP12.57□□□□□ -0.4
GGA3-216ENST00000583282 HDGFL3Q9Y3E1 203 aa12.57□□□□□ -0.4
GGA3-216ENST00000583282 DOCK7Q96N67 2140 aa12.56□□□□□ -0.4
GGA3-216ENST00000583282 A0A1B0GUH1 482 aa12.56□□□□□ -0.4
GGA3-216ENST00000583282 AQP12BA6NM10 295 aa12.56□□□□□ -0.4
GGA3-216ENST00000583282 E9PLN8 166 aa12.56□□□□□ -0.4
GGA3-216ENST00000583282 FFAR1O14842 300 aa12.56□□□□□ -0.4
GGA3-216ENST00000583282 AQP8O94778 261 aa12.56□□□□□ -0.4
GGA3-216ENST00000583282 PRSS23O95084 383 aa12.56□□□□□ -0.4
GGA3-216ENST00000583282 TGM6O95932 706 aa12.56□□□□□ -0.4
GGA3-216ENST00000583282 GLI4P10075 376 aa12.56□□□□□ -0.4
GGA3-216ENST00000583282 CARD18P57730 90 aa12.56□□□□□ -0.4
GGA3-216ENST00000583282 CSNK2A1P68400 391 aaPredicted RBP12.56□□□□□ -0.4
GGA3-216ENST00000583282 EGR4Q05215 589 aa12.56□□□□□ -0.4
GGA3-216ENST00000583282 CHRNB3Q05901 458 aa12.56□□□□□ -0.4
GGA3-216ENST00000583282 PMPCAQ10713 525 aa12.56□□□□□ -0.4
GGA3-216ENST00000583282 ST3GAL3Q11203 375 aa12.56□□□□□ -0.4
GGA3-216ENST00000583282 NSUN5P2Q63ZY6 315 aa12.56□□□□□ -0.4
GGA3-216ENST00000583282 TTC33Q6PID6 262 aaPredicted RBP12.56□□□□□ -0.4
GGA3-216ENST00000583282 TMPPEQ6ZT21 453 aa12.56□□□□□ -0.4
GGA3-216ENST00000583282 SEM1Q6ZVN7 128 aa12.56□□□□□ -0.4
GGA3-216ENST00000583282 AQP12AQ8IXF9 295 aa12.56□□□□□ -0.4
GGA3-216ENST00000583282 STK35Q8TDR2 534 aa12.56□□□□□ -0.4
GGA3-216ENST00000583282 ABHD3Q8WU67 409 aa12.56□□□□□ -0.4
GGA3-216ENST00000583282 CPNE4Q96A23 557 aaPredicted RBP12.56□□□□□ -0.4
GGA3-216ENST00000583282 SLC25A36Q96CQ1 311 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms