RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 DNM1P46Q6ZS02 220 aa17.28■□□□□ 0.36
LIMD2-209ENST00000580222 CCDC121Q6ZUS5 278 aa17.28■□□□□ 0.36
LIMD2-209ENST00000580222 MARCH3Q86UD3 253 aa17.28■□□□□ 0.36
LIMD2-209ENST00000580222 PEX5LQ8IYB4 626 aa17.28■□□□□ 0.36
LIMD2-209ENST00000580222 MICU2Q8IYU8 434 aa17.28■□□□□ 0.36
LIMD2-209ENST00000580222 LILRB1Q8NHL6 650 aaPredicted RBP17.28■□□□□ 0.36
LIMD2-209ENST00000580222 RNF138Q8WVD3 245 aa17.28■□□□□ 0.36
LIMD2-209ENST00000580222 KCTD14Q9BQ13 255 aaPredicted RBP17.28■□□□□ 0.36
LIMD2-209ENST00000580222 KLHL4Q9C0H6 718 aa17.28■□□□□ 0.36
LIMD2-209ENST00000580222 C1orf21Q9H246 121 aa17.28■□□□□ 0.36
LIMD2-209ENST00000580222 TAS2R10Q9NYW0 307 aa17.28■□□□□ 0.36
LIMD2-209ENST00000580222 GMPR2Q9P2T1 348 aaKnown RBP17.28■□□□□ 0.36
LIMD2-209ENST00000580222 FBXL2Q9UKC9 423 aa17.28■□□□□ 0.36
LIMD2-209ENST00000580222 CENPVL1A0A0U1RR11 272 aa17.27■□□□□ 0.36
LIMD2-209ENST00000580222 A0A1W2PQD3 144 aa17.27■□□□□ 0.36
LIMD2-209ENST00000580222 ELOVL7A1L3X0 281 aa17.27■□□□□ 0.36
LIMD2-209ENST00000580222 ALG1L2C9J202 215 aa17.27■□□□□ 0.36
LIMD2-209ENST00000580222 NPIPB9F8W1W9 429 aa17.27■□□□□ 0.36
LIMD2-209ENST00000580222 H3BNH8 94 aa17.27■□□□□ 0.36
LIMD2-209ENST00000580222 NDUFB5O43674 189 aa17.27■□□□□ 0.36
LIMD2-209ENST00000580222 CBR3O75828 277 aa17.27■□□□□ 0.36
LIMD2-209ENST00000580222 ATP5HO75947 161 aa17.27■□□□□ 0.36
LIMD2-209ENST00000580222 PGM3O95394 542 aa17.27■□□□□ 0.36
LIMD2-209ENST00000580222 ANGPTL1O95841 491 aa17.27■□□□□ 0.36
LIMD2-209ENST00000580222 SOD3P08294 240 aa17.27■□□□□ 0.36
LIMD2-209ENST00000580222 ZNF141Q15928 474 aa17.27■□□□□ 0.36
LIMD2-209ENST00000580222 BEX5Q5H9J7 111 aa17.27■□□□□ 0.36
LIMD2-209ENST00000580222 SAMD4BQ5PRF9 694 aaKnown RBP17.27■□□□□ 0.36
LIMD2-209ENST00000580222 KRT73Q86Y46 540 aa17.27■□□□□ 0.36
LIMD2-209ENST00000580222 RNF148Q8N7C7 305 aa17.27■□□□□ 0.36
LIMD2-209ENST00000580222 WDR60Q8WVS4 1066 aa17.27■□□□□ 0.36
LIMD2-209ENST00000580222 OIT3Q8WWZ8 545 aa17.27■□□□□ 0.36
LIMD2-209ENST00000580222 AKAP1Q92667 903 aaKnown RBP eCLIP17.27■□□□□ 0.36
LIMD2-209ENST00000580222 PMM1Q92871 262 aa17.27■□□□□ 0.36
LIMD2-209ENST00000580222 CDRT15Q96T59 188 aa17.27■□□□□ 0.36
LIMD2-209ENST00000580222 SLCO5A1Q9H2Y9 848 aa17.27■□□□□ 0.36
LIMD2-209ENST00000580222 MTHFD2LQ9H903 347 aaPredicted RBP17.27■□□□□ 0.36
LIMD2-209ENST00000580222 BCL2L10Q9HD36 194 aa17.27■□□□□ 0.36
LIMD2-209ENST00000580222 SDHAF3Q9NRP4 125 aa17.27■□□□□ 0.36
LIMD2-209ENST00000580222 TAS2R1Q9NYW7 299 aa17.27■□□□□ 0.36
LIMD2-209ENST00000580222 PPP4R1LQ9P1A2 415 aa17.27■□□□□ 0.36
LIMD2-209ENST00000580222 DTNAQ9Y4J8 743 aa17.27■□□□□ 0.36
LIMD2-209ENST00000580222 C17orf51A8MQB3 221 aa17.26■□□□□ 0.35
LIMD2-209ENST00000580222 GSTA4O15217 222 aa17.26■□□□□ 0.35
LIMD2-209ENST00000580222 GYG2O15488 501 aa17.26■□□□□ 0.35
LIMD2-209ENST00000580222 ZIC3O60481 467 aa17.26■□□□□ 0.35
LIMD2-209ENST00000580222 TMCC2O75069 709 aa17.26■□□□□ 0.35
LIMD2-209ENST00000580222 ADAM11O75078 769 aa17.26■□□□□ 0.35
LIMD2-209ENST00000580222 DBIP07108 87 aaKnown RBP17.26■□□□□ 0.35
LIMD2-209ENST00000580222 THBS1P07996 1170 aa17.26■□□□□ 0.35
LIMD2-209ENST00000580222 IDUAP35475 653 aa17.26■□□□□ 0.35
LIMD2-209ENST00000580222 GCKP35557 465 aa17.26■□□□□ 0.35
LIMD2-209ENST00000580222 CDKN1AP38936 164 aa17.26■□□□□ 0.35
LIMD2-209ENST00000580222 RASSF2P50749 326 aa17.26■□□□□ 0.35
LIMD2-209ENST00000580222 B3GALT5-AS1P59052 145 aa17.26■□□□□ 0.35
LIMD2-209ENST00000580222 RPS4XP62701 263 aaKnown RBP17.26■□□□□ 0.35
LIMD2-209ENST00000580222 MAPK14Q16539 360 aa17.26■□□□□ 0.35
LIMD2-209ENST00000580222 DNAL1Q4LDG9 190 aa17.26■□□□□ 0.35
LIMD2-209ENST00000580222 LIN52Q52LA3 116 aa17.26■□□□□ 0.35
LIMD2-209ENST00000580222 APOOLQ6UXV4 268 aa17.26■□□□□ 0.35
LIMD2-209ENST00000580222 P4HA3Q7Z4N8 544 aa17.26■□□□□ 0.35
LIMD2-209ENST00000580222 MISPQ8IVT2 679 aa17.26■□□□□ 0.35
LIMD2-209ENST00000580222 PHOSPHO1Q8TCT1 267 aa17.26■□□□□ 0.35
LIMD2-209ENST00000580222 SLC7A6OSQ96CW6 309 aaPredicted RBP17.26■□□□□ 0.35
LIMD2-209ENST00000580222 PLPPR2Q96GM1 343 aa17.26■□□□□ 0.35
LIMD2-209ENST00000580222 ZNF845Q96IR2 970 aaPredicted RBP17.26■□□□□ 0.35
LIMD2-209ENST00000580222 ZNF607Q96SK3 696 aa17.26■□□□□ 0.35
LIMD2-209ENST00000580222 SPATA5L1Q9BVQ7 753 aa17.26■□□□□ 0.35
LIMD2-209ENST00000580222 KCNE5Q9UJ90 142 aa17.26■□□□□ 0.35
LIMD2-209ENST00000580222 PRORSD1PA6NEY8 169 aa17.25■□□□□ 0.35
LIMD2-209ENST00000580222 SERINC4A6NH21 518 aa17.25■□□□□ 0.35
LIMD2-209ENST00000580222 AGAP5A6NIR3 686 aa17.25■□□□□ 0.35
LIMD2-209ENST00000580222 SLC22A20A6NK97 555 aa17.25■□□□□ 0.35
LIMD2-209ENST00000580222 IGHV4-39P01824 125 aa17.25■□□□□ 0.35
LIMD2-209ENST00000580222 ETS2P15036 469 aa17.25■□□□□ 0.35
LIMD2-209ENST00000580222 IL7RP16871 459 aa17.25■□□□□ 0.35
LIMD2-209ENST00000580222 TCN1P20061 433 aaPredicted RBP17.25■□□□□ 0.35
LIMD2-209ENST00000580222 RPS4Y1P22090 263 aaKnown RBP17.25■□□□□ 0.35
LIMD2-209ENST00000580222 GAS1P54826 345 aa17.25■□□□□ 0.35
LIMD2-209ENST00000580222 CD226Q15762 336 aa17.25■□□□□ 0.35
LIMD2-209ENST00000580222 EXOC3L2Q2M3D2 409 aa17.25■□□□□ 0.35
LIMD2-209ENST00000580222 KLHL26Q53HC5 615 aa17.25■□□□□ 0.35
LIMD2-209ENST00000580222 C6orf52Q5T4I8 152 aa17.25■□□□□ 0.35
LIMD2-209ENST00000580222 PATL1Q86TB9 770 aaKnown RBP17.25■□□□□ 0.35
LIMD2-209ENST00000580222 VRK2Q86Y07 508 aa17.25■□□□□ 0.35
LIMD2-209ENST00000580222 OR52P1PQ8NH57 321 aa17.25■□□□□ 0.35
LIMD2-209ENST00000580222 RTN4RQ9BZR6 473 aa17.25■□□□□ 0.35
LIMD2-209ENST00000580222 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.25■□□□□ 0.35
LIMD2-209ENST00000580222 PRPF19Q9UMS4 504 aaKnown RBP17.25■□□□□ 0.35
LIMD2-209ENST00000580222 ZNF443Q9Y2A4 671 aaPredicted RBP17.25■□□□□ 0.35
LIMD2-209ENST00000580222 A0A096LNT2 108 aa17.24■□□□□ 0.35
LIMD2-209ENST00000580222 GTPBP1O00178 669 aaKnown RBP17.24■□□□□ 0.35
LIMD2-209ENST00000580222 CSTAP01040 98 aa17.24■□□□□ 0.35
LIMD2-209ENST00000580222 OPN1SWP03999 348 aa17.24■□□□□ 0.35
LIMD2-209ENST00000580222 PABPC4LP0CB38 370 aaKnown RBP17.24■□□□□ 0.35
LIMD2-209ENST00000580222 CD8BP10966 210 aa17.24■□□□□ 0.35
LIMD2-209ENST00000580222 UBL4AP11441 157 aa17.24■□□□□ 0.35
LIMD2-209ENST00000580222 PCBP3P57721 371 aaKnown RBP17.24■□□□□ 0.35
LIMD2-209ENST00000580222 RUNX1T1Q06455 604 aa17.24■□□□□ 0.35
LIMD2-209ENST00000580222 C17orf67Q0P5P2 114 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms