RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, human

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC57-211	ENST00000578187	SYT14P1	Q58G82	188 aa		11.41	□□□□□ -0.58
CCDC57-211	ENST00000578187	RABL3	Q5HYI8	236 aa		11.41	□□□□□ -0.58
CCDC57-211	ENST00000578187	PPP4R4	Q6NUP7	873 aa		11.41	□□□□□ -0.58
CCDC57-211	ENST00000578187	PIGW	Q7Z7B1	504 aa		11.41	□□□□□ -0.58
CCDC57-211	ENST00000578187	COMTD1	Q86VU5	262 aa		11.41	□□□□□ -0.58
CCDC57-211	ENST00000578187	CPNE4	Q96A23	557 aa	Predicted RBP	11.41	□□□□□ -0.58
CCDC57-211	ENST00000578187	ZNF607	Q96SK3	696 aa		11.41	□□□□□ -0.58
CCDC57-211	ENST00000578187	MED18	Q9BUE0	208 aa		11.41	□□□□□ -0.58
CCDC57-211	ENST00000578187	SRXN1	Q9BYN0	137 aa		11.41	□□□□□ -0.58
CCDC57-211	ENST00000578187	PRRG4	Q9BZD6	226 aa		11.41	□□□□□ -0.58
CCDC57-211	ENST00000578187	PLEKHF2	Q9H8W4	249 aa		11.41	□□□□□ -0.58
CCDC57-211	ENST00000578187	CTPS2	Q9NRF8	586 aa		11.41	□□□□□ -0.58
CCDC57-211	ENST00000578187	SERINC1	Q9NRX5	453 aa		11.41	□□□□□ -0.58
CCDC57-211	ENST00000578187	BEX4	Q9NWD9	120 aa	Predicted RBP	11.41	□□□□□ -0.58
CCDC57-211	ENST00000578187	GID8	Q9NWU2	228 aa		11.41	□□□□□ -0.58
CCDC57-211	ENST00000578187	MCTS1	Q9ULC4	181 aa	Known RBP	11.41	□□□□□ -0.58
CCDC57-211	ENST00000578187	SPIN1	Q9Y657	262 aa	Predicted RBP	11.41	□□□□□ -0.58
CCDC57-211	ENST00000578187	MED13L	Q71F56	2210 aa		11.41	□□□□□ -0.58
CCDC57-211	ENST00000578187	TMED7-TICAM2	A0A0A6YYA0	188 aa		11.4	□□□□□ -0.58
CCDC57-211	ENST00000578187	PRORSD1P	A6NEY8	169 aa		11.4	□□□□□ -0.58
CCDC57-211	ENST00000578187	TPST1	O60507	370 aa		11.4	□□□□□ -0.58
CCDC57-211	ENST00000578187	GCM2	O75603	506 aa	Predicted RBP	11.4	□□□□□ -0.58
CCDC57-211	ENST00000578187	SERPINB7	O75635	380 aa		11.4	□□□□□ -0.58
CCDC57-211	ENST00000578187	MFN2	O95140	757 aa		11.4	□□□□□ -0.58
CCDC57-211	ENST00000578187	PLG	P00747	810 aa	Predicted RBP	11.4	□□□□□ -0.58
CCDC57-211	ENST00000578187	PRG2	P13727	222 aa		11.4	□□□□□ -0.58
CCDC57-211	ENST00000578187	POU2F1	P14859	743 aa		11.4	□□□□□ -0.58
CCDC57-211	ENST00000578187	TACR3	P29371	465 aa		11.4	□□□□□ -0.58
CCDC57-211	ENST00000578187	AQP1	P29972	269 aa		11.4	□□□□□ -0.58
CCDC57-211	ENST00000578187	SLC7A1	P30825	629 aa		11.4	□□□□□ -0.58
CCDC57-211	ENST00000578187	CD79B	P40259	229 aa		11.4	□□□□□ -0.58
CCDC57-211	ENST00000578187	POLR2H	P52434	150 aa	Known RBP	11.4	□□□□□ -0.58
CCDC57-211	ENST00000578187	CARD18	P57730	90 aa		11.4	□□□□□ -0.58
CCDC57-211	ENST00000578187	SIRPA	P78324	504 aa		11.4	□□□□□ -0.58
CCDC57-211	ENST00000578187	FOXD4	Q12950	439 aa	Predicted RBP	11.4	□□□□□ -0.58
CCDC57-211	ENST00000578187	VMAC	Q2NL98	169 aa		11.4	□□□□□ -0.58
CCDC57-211	ENST00000578187	C8orf82	Q6P1X6	216 aa	Predicted RBP	11.4	□□□□□ -0.58
CCDC57-211	ENST00000578187	HACD2	Q6Y1H2	254 aa		11.4	□□□□□ -0.58
CCDC57-211	ENST00000578187	ARPIN	Q7Z6K5	226 aa		11.4	□□□□□ -0.58
CCDC57-211	ENST00000578187	ADGRG3	Q86Y34	549 aa		11.4	□□□□□ -0.58
CCDC57-211	ENST00000578187	ATP6V1C2	Q8NEY4	427 aa		11.4	□□□□□ -0.58
CCDC57-211	ENST00000578187	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	11.4	□□□□□ -0.58
CCDC57-211	ENST00000578187	RNF128	Q8TEB7	428 aa		11.4	□□□□□ -0.58
CCDC57-211	ENST00000578187	OSTF1	Q92882	214 aa		11.4	□□□□□ -0.58
CCDC57-211	ENST00000578187	STARD4	Q96DR4	205 aa		11.4	□□□□□ -0.58
CCDC57-211	ENST00000578187	REXO5	Q96IC2	774 aa	Known RBP	11.4	□□□□□ -0.58
CCDC57-211	ENST00000578187	ADAM19	Q9H013	955 aa		11.4	□□□□□ -0.58
CCDC57-211	ENST00000578187	TIGAR	Q9NQ88	270 aa		11.4	□□□□□ -0.58
CCDC57-211	ENST00000578187	OSGIN1	Q9UJX0	560 aa		11.4	□□□□□ -0.58
CCDC57-211	ENST00000578187	PROCR	Q9UNN8	238 aa		11.4	□□□□□ -0.58
CCDC57-211	ENST00000578187	ARL2BP	Q9Y2Y0	163 aa		11.4	□□□□□ -0.58
CCDC57-211	ENST00000578187	TMED7	Q9Y3B3	224 aa		11.4	□□□□□ -0.58
CCDC57-211	ENST00000578187	EMC9	Q9Y3B6	208 aa		11.4	□□□□□ -0.58
CCDC57-211	ENST00000578187	TESMIN	Q9Y4I5	508 aa		11.4	□□□□□ -0.58
CCDC57-211	ENST00000578187		A0A1W2PNR3	127 aa		11.39	□□□□□ -0.59
CCDC57-211	ENST00000578187	FAM220BP	B1ANY3	271 aa		11.39	□□□□□ -0.59
CCDC57-211	ENST00000578187	ARHGEF9	O43307	516 aa		11.39	□□□□□ -0.59
CCDC57-211	ENST00000578187	ZNF208	O43345	1280 aa		11.39	□□□□□ -0.59
CCDC57-211	ENST00000578187	FRS3	O43559	492 aa		11.39	□□□□□ -0.59
CCDC57-211	ENST00000578187	SHOX2	O60902	331 aa	Predicted RBP	11.39	□□□□□ -0.59
CCDC57-211	ENST00000578187	SS18L1	O75177	396 aa	Predicted RBP	11.39	□□□□□ -0.59
CCDC57-211	ENST00000578187	SYNGR4	O95473	234 aa		11.39	□□□□□ -0.59
CCDC57-211	ENST00000578187	CD8B	P10966	210 aa		11.39	□□□□□ -0.59
CCDC57-211	ENST00000578187	FKBP2	P26885	142 aa	Known RBP	11.39	□□□□□ -0.59
CCDC57-211	ENST00000578187	PRDX6	P30041	224 aa		11.39	□□□□□ -0.59
CCDC57-211	ENST00000578187	KIR2DL2	P43627	348 aa	Predicted RBP	11.39	□□□□□ -0.59
CCDC57-211	ENST00000578187	CLK1	P49759	484 aa	Known RBP	11.39	□□□□□ -0.59
CCDC57-211	ENST00000578187	MAP2K6	P52564	334 aa		11.39	□□□□□ -0.59
CCDC57-211	ENST00000578187	RAC3	P60763	192 aa		11.39	□□□□□ -0.59
CCDC57-211	ENST00000578187	ADAM8	P78325	824 aa		11.39	□□□□□ -0.59
CCDC57-211	ENST00000578187	DMTN	Q08495	405 aa		11.39	□□□□□ -0.59
CCDC57-211	ENST00000578187	GLIPR1L2	Q4G1C9	344 aa		11.39	□□□□□ -0.59
CCDC57-211	ENST00000578187	INTS11	Q5TA45	600 aa	Known RBP	11.39	□□□□□ -0.59
CCDC57-211	ENST00000578187	WBP2NL	Q6ICG8	309 aa		11.39	□□□□□ -0.59
CCDC57-211	ENST00000578187	ERICH5	Q6P6B1	374 aa		11.39	□□□□□ -0.59
CCDC57-211	ENST00000578187	VWA1	Q6PCB0	445 aa		11.39	□□□□□ -0.59
CCDC57-211	ENST00000578187	CCDC80	Q76M96	950 aa		11.39	□□□□□ -0.59
CCDC57-211	ENST00000578187	PATL1	Q86TB9	770 aa	Known RBP	11.39	□□□□□ -0.59
CCDC57-211	ENST00000578187	ARMC8	Q8IUR7	673 aa		11.39	□□□□□ -0.59
CCDC57-211	ENST00000578187	PIGT	Q969N2	578 aa		11.39	□□□□□ -0.59
CCDC57-211	ENST00000578187	GMPPA	Q96IJ6	420 aa	Predicted RBP	11.39	□□□□□ -0.59
CCDC57-211	ENST00000578187	ZNF583	Q96ND8	569 aa		11.39	□□□□□ -0.59
CCDC57-211	ENST00000578187	OR5B2	Q96R09	309 aa		11.39	□□□□□ -0.59
CCDC57-211	ENST00000578187	ECSIT	Q9BQ95	431 aa		11.39	□□□□□ -0.59
CCDC57-211	ENST00000578187	EVA1A	Q9H8M9	152 aa		11.39	□□□□□ -0.59
CCDC57-211	ENST00000578187	EFCAB1	Q9HAE3	211 aa		11.39	□□□□□ -0.59
CCDC57-211	ENST00000578187	ANKHD1	Q8IWZ3	2542 aa	Known RBP	11.38	□□□□□ -0.59
CCDC57-211	ENST00000578187	TMEM72	A0PK05	275 aa		11.38	□□□□□ -0.59
CCDC57-211	ENST00000578187	C16orf97	H3BN30	126 aa		11.38	□□□□□ -0.59
CCDC57-211	ENST00000578187	AIM2	O14862	343 aa		11.38	□□□□□ -0.59
CCDC57-211	ENST00000578187	DNPH1	O43598	174 aa		11.38	□□□□□ -0.59
CCDC57-211	ENST00000578187	PMS2P2	O95744	297 aa		11.38	□□□□□ -0.59
CCDC57-211	ENST00000578187	FPR1	P21462	350 aa		11.38	□□□□□ -0.59
CCDC57-211	ENST00000578187	HTR2A	P28223	471 aa		11.38	□□□□□ -0.59
CCDC57-211	ENST00000578187	UGT2B10	P36537	528 aa		11.38	□□□□□ -0.59
CCDC57-211	ENST00000578187	DIO1	P49895	249 aa		11.38	□□□□□ -0.59
CCDC57-211	ENST00000578187	CRYBA2	P53672	197 aa		11.38	□□□□□ -0.59
CCDC57-211	ENST00000578187	CTBP2	P56545	445 aa		11.38	□□□□□ -0.59
CCDC57-211	ENST00000578187	COPZ1	P61923	177 aa		11.38	□□□□□ -0.59
CCDC57-211	ENST00000578187	FAM27E3	Q08E93	113 aa		11.38	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms