RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 SLC6A2P23975 617 aa14.28□□□□□ -0.12
VAPA-204ENST00000577901 FKBP2P26885 142 aaKnown RBP14.28□□□□□ -0.12
VAPA-204ENST00000577901 LOXP28300 417 aaPredicted RBP14.28□□□□□ -0.12
VAPA-204ENST00000577901 SLC7A1P30825 629 aa14.28□□□□□ -0.12
VAPA-204ENST00000577901 HTR3AP46098 478 aa14.28□□□□□ -0.12
VAPA-204ENST00000577901 CDK6Q00534 326 aa14.28□□□□□ -0.12
VAPA-204ENST00000577901 CYLC2Q14093 348 aaPredicted RBP14.28□□□□□ -0.12
VAPA-204ENST00000577901 ZNF311Q5JNZ3 666 aa14.28□□□□□ -0.12
VAPA-204ENST00000577901 ANKRD34AQ69YU3 496 aa14.28□□□□□ -0.12
VAPA-204ENST00000577901 REEP3Q6NUK4 255 aa14.28□□□□□ -0.12
VAPA-204ENST00000577901 C3orf33Q6P1S2 294 aa14.28□□□□□ -0.12
VAPA-204ENST00000577901 RETREG3Q86VR2 466 aa14.28□□□□□ -0.12
VAPA-204ENST00000577901 KRT73Q86Y46 540 aa14.28□□□□□ -0.12
VAPA-204ENST00000577901 CPNE4Q96A23 557 aaPredicted RBP14.28□□□□□ -0.12
VAPA-204ENST00000577901 CPPED1Q9BRF8 314 aaPredicted RBP14.28□□□□□ -0.12
VAPA-204ENST00000577901 SPATA5L1Q9BVQ7 753 aa14.28□□□□□ -0.12
VAPA-204ENST00000577901 SPATA9Q9BWV2 254 aa14.28□□□□□ -0.12
VAPA-204ENST00000577901 GSX2Q9BZM3 304 aa14.28□□□□□ -0.12
VAPA-204ENST00000577901 TMEM38AQ9H6F2 299 aa14.28□□□□□ -0.12
VAPA-204ENST00000577901 RLIMQ9NVW2 624 aa14.28□□□□□ -0.12
VAPA-204ENST00000577901 PROCRQ9UNN8 238 aa14.28□□□□□ -0.12
VAPA-204ENST00000577901 ZNF443Q9Y2A4 671 aaPredicted RBP14.28□□□□□ -0.12
VAPA-204ENST00000577901 BBIP1A8MTZ0 92 aa14.27□□□□□ -0.13
VAPA-204ENST00000577901 INAFM1C9JVW0 142 aa14.27□□□□□ -0.13
VAPA-204ENST00000577901 FAAHO00519 579 aa14.27□□□□□ -0.13
VAPA-204ENST00000577901 SLC22A2O15244 555 aa14.27□□□□□ -0.13
VAPA-204ENST00000577901 CCDC22O60826 627 aa14.27□□□□□ -0.13
VAPA-204ENST00000577901 PLGP00747 810 aaPredicted RBP14.27□□□□□ -0.13
VAPA-204ENST00000577901 NPPAP01160 153 aa14.27□□□□□ -0.13
VAPA-204ENST00000577901 ETS2P15036 469 aa14.27□□□□□ -0.13
VAPA-204ENST00000577901 SHC1P29353 583 aa14.27□□□□□ -0.13
VAPA-204ENST00000577901 PTH2RP49190 550 aa14.27□□□□□ -0.13
VAPA-204ENST00000577901 PPP2R2BQ00005 443 aa14.27□□□□□ -0.13
VAPA-204ENST00000577901 COQ5Q5HYK3 327 aa14.27□□□□□ -0.13
VAPA-204ENST00000577901 RNF220Q5VTB9 566 aa14.27□□□□□ -0.13
VAPA-204ENST00000577901 ZNF836Q6ZNA1 936 aa14.27□□□□□ -0.13
VAPA-204ENST00000577901 C22orf34Q6ZV56 151 aa14.27□□□□□ -0.13
VAPA-204ENST00000577901 NFKBIDQ8NI38 313 aa14.27□□□□□ -0.13
VAPA-204ENST00000577901 SLC25A43Q8WUT9 341 aaPredicted RBP14.27□□□□□ -0.13
VAPA-204ENST00000577901 C10orf82Q8WW14 230 aa14.27□□□□□ -0.13
VAPA-204ENST00000577901 SH3GL1Q99961 368 aa14.27□□□□□ -0.13
VAPA-204ENST00000577901 KLHL4Q9C0H6 718 aa14.27□□□□□ -0.13
VAPA-204ENST00000577901 IKZF5Q9H5V7 419 aa14.27□□□□□ -0.13
VAPA-204ENST00000577901 GLRX2Q9NS18 164 aa14.27□□□□□ -0.13
VAPA-204ENST00000577901 ZANQ9Y493 2812 aa14.27□□□□□ -0.13
VAPA-204ENST00000577901 FBP2O00757 339 aa14.26□□□□□ -0.13
VAPA-204ENST00000577901 AP3D1O14617 1153 aa14.26□□□□□ -0.13
VAPA-204ENST00000577901 SERPINB7O75635 380 aa14.26□□□□□ -0.13
VAPA-204ENST00000577901 AQP8O94778 261 aa14.26□□□□□ -0.13
VAPA-204ENST00000577901 COPZ1P61923 177 aa14.26□□□□□ -0.13
VAPA-204ENST00000577901 PLAURQ03405 335 aa14.26□□□□□ -0.13
VAPA-204ENST00000577901 RBBP4Q09028 425 aa14.26□□□□□ -0.13
VAPA-204ENST00000577901 EPS8Q12929 822 aa14.26□□□□□ -0.13
VAPA-204ENST00000577901 SCARB2Q14108 478 aa14.26□□□□□ -0.13
VAPA-204ENST00000577901 GUSBP1Q15486 140 aa14.26□□□□□ -0.13
VAPA-204ENST00000577901 CYP51A1Q16850 503 aa14.26□□□□□ -0.13
VAPA-204ENST00000577901 EXOC3L2Q2M3D2 409 aa14.26□□□□□ -0.13
VAPA-204ENST00000577901 TRMT5Q32P41 509 aaKnown RBP14.26□□□□□ -0.13
VAPA-204ENST00000577901 FAM214BQ7L5A3 538 aa14.26□□□□□ -0.13
VAPA-204ENST00000577901 C10orf111Q8N326 155 aa14.26□□□□□ -0.13
VAPA-204ENST00000577901 CLIP4Q8N3C7 705 aa14.26□□□□□ -0.13
VAPA-204ENST00000577901 PCYOX1LQ8NBM8 494 aa14.26□□□□□ -0.13
VAPA-204ENST00000577901 GMPPAQ96IJ6 420 aaPredicted RBP14.26□□□□□ -0.13
VAPA-204ENST00000577901 OR5B2Q96R09 309 aa14.26□□□□□ -0.13
VAPA-204ENST00000577901 ZNF607Q96SK3 696 aa14.26□□□□□ -0.13
VAPA-204ENST00000577901 CCDC106Q9BWC9 280 aa14.26□□□□□ -0.13
VAPA-204ENST00000577901 CHRNA9Q9UGM1 479 aa14.26□□□□□ -0.13
VAPA-204ENST00000577901 EMC9Q9Y3B6 208 aa14.26□□□□□ -0.13
VAPA-204ENST00000577901 CAPN7Q9Y6W3 813 aa14.26□□□□□ -0.13
VAPA-204ENST00000577901 LOC100653049A0A140TA62 436 aa14.25□□□□□ -0.13
VAPA-204ENST00000577901 ADAM11O75078 769 aa14.25□□□□□ -0.13
VAPA-204ENST00000577901 KRT34O76011 436 aa14.25□□□□□ -0.13
VAPA-204ENST00000577901 CNOT4O95628 575 aaKnown RBP14.25□□□□□ -0.13
VAPA-204ENST00000577901 GKN3PP0CG01 181 aa14.25□□□□□ -0.13
VAPA-204ENST00000577901 TFPIP10646 304 aa14.25□□□□□ -0.13
VAPA-204ENST00000577901 PRKAR1BP31321 381 aa14.25□□□□□ -0.13
VAPA-204ENST00000577901 SLC1A3P43003 542 aa14.25□□□□□ -0.13
VAPA-204ENST00000577901 CLK1P49759 484 aaKnown RBP14.25□□□□□ -0.13
VAPA-204ENST00000577901 POLR2HP52434 150 aaKnown RBP14.25□□□□□ -0.13
VAPA-204ENST00000577901 MAP2K6P52564 334 aa14.25□□□□□ -0.13
VAPA-204ENST00000577901 CTBP2P56545 445 aa14.25□□□□□ -0.13
VAPA-204ENST00000577901 MTPNP58546 118 aa14.25□□□□□ -0.13
VAPA-204ENST00000577901 RAC3P60763 192 aa14.25□□□□□ -0.13
VAPA-204ENST00000577901 CAPRIN1Q14444 709 aaKnown RBP14.25□□□□□ -0.13
VAPA-204ENST00000577901 RNPS1Q15287 305 aaKnown RBP14.25□□□□□ -0.13
VAPA-204ENST00000577901 ADRM1Q16186 407 aa14.25□□□□□ -0.13
VAPA-204ENST00000577901 SPATA21Q7Z572 469 aa14.25□□□□□ -0.13
VAPA-204ENST00000577901 CPLX4Q7Z7G2 160 aa14.25□□□□□ -0.13
VAPA-204ENST00000577901 SERPINA11Q86U17 422 aa14.25□□□□□ -0.13
VAPA-204ENST00000577901 C11orf65Q8NCR3 313 aa14.25□□□□□ -0.13
VAPA-204ENST00000577901 HIPK4Q8NE63 616 aa14.25□□□□□ -0.13
VAPA-204ENST00000577901 ROBO4Q8WZ75 1007 aa14.25□□□□□ -0.13
VAPA-204ENST00000577901 SLC35B4Q969S0 331 aa14.25□□□□□ -0.13
VAPA-204ENST00000577901 LRRC58Q96CX6 371 aa14.25□□□□□ -0.13
VAPA-204ENST00000577901 ELAC2Q9BQ52 826 aaKnown RBP14.25□□□□□ -0.13
VAPA-204ENST00000577901 NSRP1Q9H0G5 558 aaKnown RBP14.25□□□□□ -0.13
VAPA-204ENST00000577901 CTPS2Q9NRF8 586 aa14.25□□□□□ -0.13
VAPA-204ENST00000577901 GID8Q9NWU2 228 aa14.25□□□□□ -0.13
VAPA-204ENST00000577901 ANGPT4Q9Y264 503 aa14.25□□□□□ -0.13
VAPA-204ENST00000577901 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms