RNA–Protein interactions for RNA: ENST00000575836.1

TNFRSF12A-207, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 3

Gene TNFRSF12A, Length 161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-207ENST00000575836 NRF1Q16656 503 aa13.79□□□□□ -0.2
TNFRSF12A-207ENST00000575836 ELOA3BQ3SY89 546 aa13.79□□□□□ -0.2
TNFRSF12A-207ENST00000575836 SP5Q6BEB4 398 aaPredicted RBP13.79□□□□□ -0.2
TNFRSF12A-207ENST00000575836 ULK3Q6PHR2 472 aa13.79□□□□□ -0.2
TNFRSF12A-207ENST00000575836 C16orf89Q6UX73 402 aa13.79□□□□□ -0.2
TNFRSF12A-207ENST00000575836 FCRLAQ7L513 359 aa13.79□□□□□ -0.2
TNFRSF12A-207ENST00000575836 PGAM4Q8N0Y7 254 aa13.79□□□□□ -0.2
TNFRSF12A-207ENST00000575836 SLC43A2Q8N370 569 aa13.79□□□□□ -0.2
TNFRSF12A-207ENST00000575836 ELOA3Q8NG57 546 aa13.79□□□□□ -0.2
TNFRSF12A-207ENST00000575836 RNF128Q8TEB7 428 aa13.79□□□□□ -0.2
TNFRSF12A-207ENST00000575836 ROBO4Q8WZ75 1007 aa13.79□□□□□ -0.2
TNFRSF12A-207ENST00000575836 GMPPAQ96IJ6 420 aaPredicted RBP13.79□□□□□ -0.2
TNFRSF12A-207ENST00000575836 NSL1Q96IY1 281 aa13.79□□□□□ -0.2
TNFRSF12A-207ENST00000575836 ARL5BQ96KC2 179 aa13.79□□□□□ -0.2
TNFRSF12A-207ENST00000575836 POTEKPQ9BYX7 375 aa13.79□□□□□ -0.2
TNFRSF12A-207ENST00000575836 TMEM181Q9P2C4 612 aa13.79□□□□□ -0.2
TNFRSF12A-207ENST00000575836 PACSIN3Q9UKS6 424 aa13.79□□□□□ -0.2
TNFRSF12A-207ENST00000575836 TRAPPC4Q9Y296 219 aa13.79□□□□□ -0.2
TNFRSF12A-207ENST00000575836 EMC9Q9Y3B6 208 aa13.79□□□□□ -0.2
TNFRSF12A-207ENST00000575836 MED12LQ86YW9 2145 aa13.79□□□□□ -0.2
TNFRSF12A-207ENST00000575836 COL12A1Q99715 3063 aa13.78□□□□□ -0.2
TNFRSF12A-207ENST00000575836 A0A1B0GWA3 101 aa13.78□□□□□ -0.2
TNFRSF12A-207ENST00000575836 A8MVM7 634 aa13.78□□□□□ -0.2
TNFRSF12A-207ENST00000575836 CXCR6O00574 342 aa13.78□□□□□ -0.2
TNFRSF12A-207ENST00000575836 TNFSF13O75888 250 aa13.78□□□□□ -0.2
TNFRSF12A-207ENST00000575836 PRKD3O94806 890 aa13.78□□□□□ -0.2
TNFRSF12A-207ENST00000575836 PNMTP11086 282 aa13.78□□□□□ -0.2
TNFRSF12A-207ENST00000575836 HTR2AP28223 471 aa13.78□□□□□ -0.2
TNFRSF12A-207ENST00000575836 GRNP28799 593 aaKnown RBP13.78□□□□□ -0.2
TNFRSF12A-207ENST00000575836 CRYBA2P53672 197 aa13.78□□□□□ -0.2
TNFRSF12A-207ENST00000575836 SIRPAP78324 504 aa13.78□□□□□ -0.2
TNFRSF12A-207ENST00000575836 SLC35A1P78382 337 aa13.78□□□□□ -0.2
TNFRSF12A-207ENST00000575836 OR1Q1Q15612 314 aa13.78□□□□□ -0.2
TNFRSF12A-207ENST00000575836 CYBRD1Q53TN4 286 aa13.78□□□□□ -0.2
TNFRSF12A-207ENST00000575836 ALG10BQ5I7T1 473 aa13.78□□□□□ -0.2
TNFRSF12A-207ENST00000575836 C6orf89Q6UWU4 347 aa13.78□□□□□ -0.2
TNFRSF12A-207ENST00000575836 FAM214BQ7L5A3 538 aa13.78□□□□□ -0.2
TNFRSF12A-207ENST00000575836 ATG4DQ86TL0 474 aaPredicted RBP13.78□□□□□ -0.2
TNFRSF12A-207ENST00000575836 VANGL1Q8TAA9 524 aaPredicted RBP13.78□□□□□ -0.2
TNFRSF12A-207ENST00000575836 LZICQ8WZA0 190 aa13.78□□□□□ -0.2
TNFRSF12A-207ENST00000575836 SLC47A1Q96FL8 570 aa13.78□□□□□ -0.2
TNFRSF12A-207ENST00000575836 MCHR1Q99705 422 aa13.78□□□□□ -0.2
TNFRSF12A-207ENST00000575836 TACO1Q9BSH4 297 aaKnown RBP13.78□□□□□ -0.2
TNFRSF12A-207ENST00000575836 GP6Q9HCN6 339 aa13.78□□□□□ -0.2
TNFRSF12A-207ENST00000575836 ADPRHL2Q9NX46 363 aa13.78□□□□□ -0.2
TNFRSF12A-207ENST00000575836 FOXD3Q9UJU5 478 aaPredicted RBP13.78□□□□□ -0.2
TNFRSF12A-207ENST00000575836 INTS1Q8N201 2190 aaKnown RBP13.78□□□□□ -0.2
TNFRSF12A-207ENST00000575836 EIF1BO60739 113 aaKnown RBP13.77□□□□□ -0.21
TNFRSF12A-207ENST00000575836 SS18L1O75177 396 aaPredicted RBP13.77□□□□□ -0.21
TNFRSF12A-207ENST00000575836 GMNNO75496 209 aa13.77□□□□□ -0.21
TNFRSF12A-207ENST00000575836 AHSA1O95433 338 aa13.77□□□□□ -0.21
TNFRSF12A-207ENST00000575836 CALB2P22676 271 aa13.77□□□□□ -0.21
TNFRSF12A-207ENST00000575836 COL8A1P27658 744 aa13.77□□□□□ -0.21
TNFRSF12A-207ENST00000575836 IDUAP35475 653 aa13.77□□□□□ -0.21
TNFRSF12A-207ENST00000575836 KIR2DL2P43627 348 aaPredicted RBP13.77□□□□□ -0.21
TNFRSF12A-207ENST00000575836 OR2B6P58173 313 aa13.77□□□□□ -0.21
TNFRSF12A-207ENST00000575836 TFF3Q07654 80 aa13.77□□□□□ -0.21
TNFRSF12A-207ENST00000575836 GUSBP1Q15486 140 aa13.77□□□□□ -0.21
TNFRSF12A-207ENST00000575836 FBXL19-AS1Q494R0 122 aa13.77□□□□□ -0.21
TNFRSF12A-207ENST00000575836 TMEM201Q5SNT2 666 aa13.77□□□□□ -0.21
TNFRSF12A-207ENST00000575836 SWT1Q5T5J6 900 aaKnown RBP13.77□□□□□ -0.21
TNFRSF12A-207ENST00000575836 ZNF613Q6PF04 617 aa13.77□□□□□ -0.21
TNFRSF12A-207ENST00000575836 C5orf46Q6UWT4 87 aa13.77□□□□□ -0.21
TNFRSF12A-207ENST00000575836 OR6T1Q8NGN1 323 aa13.77□□□□□ -0.21
TNFRSF12A-207ENST00000575836 OR6K3Q8NGY3 331 aa13.77□□□□□ -0.21
TNFRSF12A-207ENST00000575836 RNF217Q8TC41 542 aa13.77□□□□□ -0.21
TNFRSF12A-207ENST00000575836 STK35Q8TDR2 534 aa13.77□□□□□ -0.21
TNFRSF12A-207ENST00000575836 ABHD3Q8WU67 409 aa13.77□□□□□ -0.21
TNFRSF12A-207ENST00000575836 RNASE6Q93091 150 aaKnown RBP13.77□□□□□ -0.21
TNFRSF12A-207ENST00000575836 PRR14Q9BWN1 585 aa13.77□□□□□ -0.21
TNFRSF12A-207ENST00000575836 TAPBPLQ9BX59 468 aa13.77□□□□□ -0.21
TNFRSF12A-207ENST00000575836 JKAMPQ9P055 326 aa13.77□□□□□ -0.21
TNFRSF12A-207ENST00000575836 KLHL9Q9P2J3 617 aa13.77□□□□□ -0.21
TNFRSF12A-207ENST00000575836 GMPR2Q9P2T1 348 aaKnown RBP13.77□□□□□ -0.21
TNFRSF12A-207ENST00000575836 CLEC4AQ9UMR7 237 aa13.77□□□□□ -0.21
TNFRSF12A-207ENST00000575836 SH3GLB1Q9Y371 365 aa13.77□□□□□ -0.21
TNFRSF12A-207ENST00000575836 IGHV3-15A0A0B4J1V0 119 aa13.76□□□□□ -0.21
TNFRSF12A-207ENST00000575836 A0A0B4J2E0 115 aa13.76□□□□□ -0.21
TNFRSF12A-207ENST00000575836 A0A1B0GX12 115 aa13.76□□□□□ -0.21
TNFRSF12A-207ENST00000575836 ZC3H12DA2A288 527 aaKnown RBP13.76□□□□□ -0.21
TNFRSF12A-207ENST00000575836 B2RBV5 119 aa13.76□□□□□ -0.21
TNFRSF12A-207ENST00000575836 TMEM229AB2RXF0 380 aa13.76□□□□□ -0.21
TNFRSF12A-207ENST00000575836 C19orf84I3L1E1 186 aa13.76□□□□□ -0.21
TNFRSF12A-207ENST00000575836 MSTNO14793 375 aa13.76□□□□□ -0.21
TNFRSF12A-207ENST00000575836 SMAD9O15198 467 aaKnown RBP13.76□□□□□ -0.21
TNFRSF12A-207ENST00000575836 CYTIPO60759 359 aa13.76□□□□□ -0.21
TNFRSF12A-207ENST00000575836 SMNDC1O75940 238 aaKnown RBP eCLIP13.76□□□□□ -0.213e-7■■■■□ 25.5
TNFRSF12A-207ENST00000575836 GPIP06744 558 aa13.76□□□□□ -0.21
TNFRSF12A-207ENST00000575836 COX6B1P14854 86 aa13.76□□□□□ -0.21
TNFRSF12A-207ENST00000575836 UQCRC1P31930 480 aa13.76□□□□□ -0.21
TNFRSF12A-207ENST00000575836 PEX19P40855 299 aa13.76□□□□□ -0.21
TNFRSF12A-207ENST00000575836 SELENOWP63302 87 aa13.76□□□□□ -0.21
TNFRSF12A-207ENST00000575836 SLC25A3Q00325 362 aa13.76□□□□□ -0.21
TNFRSF12A-207ENST00000575836 BNIP2Q12982 314 aa13.76□□□□□ -0.21
TNFRSF12A-207ENST00000575836 SAMD4BQ5PRF9 694 aaKnown RBP13.76□□□□□ -0.21
TNFRSF12A-207ENST00000575836 C1orf140Q5VVS0 124 aa13.76□□□□□ -0.21
TNFRSF12A-207ENST00000575836 VWA1Q6PCB0 445 aa13.76□□□□□ -0.21
TNFRSF12A-207ENST00000575836 CARM1Q86X55 608 aa13.76□□□□□ -0.21
TNFRSF12A-207ENST00000575836 DEFB107AQ8IZN7 70 aa13.76□□□□□ -0.21
TNFRSF12A-207ENST00000575836 FAM162AQ96A26 154 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms