RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 IER3IP1Q9Y5U9 82 aa12.86□□□□□ -0.35
VPS33B-208ENST00000574755 VPS13AQ96RL7 3174 aa12.85□□□□□ -0.35
VPS33B-208ENST00000574755 TRDV1A0A1B0GX56 115 aa12.85□□□□□ -0.35
VPS33B-208ENST00000574755 SMIM30A4D0T7 59 aa12.85□□□□□ -0.35
VPS33B-208ENST00000574755 LOC110117498-PIK3R3F6TDL0 507 aa12.85□□□□□ -0.35
VPS33B-208ENST00000574755 SBK2P0C263 348 aa12.85□□□□□ -0.35
VPS33B-208ENST00000574755 TBC1D25Q3MII6 688 aa12.85□□□□□ -0.35
VPS33B-208ENST00000574755 FAAH2Q6GMR7 532 aa12.85□□□□□ -0.35
VPS33B-208ENST00000574755 ZNF574Q6ZN55 896 aaPredicted RBP12.85□□□□□ -0.35
VPS33B-208ENST00000574755 SLC29A4Q7RTT9 530 aa12.85□□□□□ -0.35
VPS33B-208ENST00000574755 LAX1Q8IWV1 398 aa12.85□□□□□ -0.35
VPS33B-208ENST00000574755 ZNF563Q8TA94 476 aa12.85□□□□□ -0.35
VPS33B-208ENST00000574755 IER2Q9BTL4 223 aa12.85□□□□□ -0.35
VPS33B-208ENST00000574755 MED18Q9BUE0 208 aa12.85□□□□□ -0.35
VPS33B-208ENST00000574755 ADGRL4Q9HBW9 690 aa12.85□□□□□ -0.35
VPS33B-208ENST00000574755 INPP5EQ9NRR6 644 aa12.85□□□□□ -0.35
VPS33B-208ENST00000574755 BABAM2Q9NXR7 383 aa12.85□□□□□ -0.35
VPS33B-208ENST00000574755 SRPK3Q9UPE1 567 aa12.85□□□□□ -0.35
VPS33B-208ENST00000574755 UGT2A1Q9Y4X1 527 aa12.85□□□□□ -0.35
VPS33B-208ENST00000574755 WDR87Q6ZQQ6 2873 aa12.85□□□□□ -0.35
VPS33B-208ENST00000574755 IGKV1D-42A0A075B6H8 117 aa12.85□□□□□ -0.35
VPS33B-208ENST00000574755 CASKO14936 926 aa12.85□□□□□ -0.35
VPS33B-208ENST00000574755 TOX3O15405 576 aaPredicted RBP12.85□□□□□ -0.35
VPS33B-208ENST00000574755 GMFGO60234 142 aa12.85□□□□□ -0.35
VPS33B-208ENST00000574755 OR7A10O76100 309 aa12.85□□□□□ -0.35
VPS33B-208ENST00000574755 PSPHP78330 225 aa12.85□□□□□ -0.35
VPS33B-208ENST00000574755 BDH1Q02338 343 aa12.85□□□□□ -0.35
VPS33B-208ENST00000574755 NR0B2Q15466 257 aa12.85□□□□□ -0.35
VPS33B-208ENST00000574755 PMS2CLQ68D20 193 aa12.85□□□□□ -0.35
VPS33B-208ENST00000574755 LANCL3Q6ZV70 420 aa12.85□□□□□ -0.35
VPS33B-208ENST00000574755 ATG4DQ86TL0 474 aaPredicted RBP12.85□□□□□ -0.35
VPS33B-208ENST00000574755 C10orf53Q8N6V4 93 aa12.85□□□□□ -0.35
VPS33B-208ENST00000574755 ARIH2OSQ8N7S6 290 aa12.85□□□□□ -0.35
VPS33B-208ENST00000574755 DRAXINQ8NBI3 349 aaPredicted RBP12.85□□□□□ -0.35
VPS33B-208ENST00000574755 OR1N1Q8NGS0 311 aa12.85□□□□□ -0.35
VPS33B-208ENST00000574755 CCNL2Q96S94 520 aaPredicted RBP12.85□□□□□ -0.35
VPS33B-208ENST00000574755 DCLRE1CQ96SD1 692 aaKnown RBP12.85□□□□□ -0.35
VPS33B-208ENST00000574755 COQ7Q99807 217 aa12.85□□□□□ -0.35
VPS33B-208ENST00000574755 KATNB1Q9BVA0 655 aa12.85□□□□□ -0.35
VPS33B-208ENST00000574755 WWTR1Q9GZV5 400 aa12.85□□□□□ -0.35
VPS33B-208ENST00000574755 TRIM36Q9NQ86 728 aa12.85□□□□□ -0.35
VPS33B-208ENST00000574755 ZNF229Q9UJW7 825 aa12.85□□□□□ -0.35
VPS33B-208ENST00000574755 CCDC163A0A0D9SF12 145 aa12.84□□□□□ -0.35
VPS33B-208ENST00000574755 GABRPO00591 440 aa12.84□□□□□ -0.35
VPS33B-208ENST00000574755 PNLIPP16233 465 aa12.84□□□□□ -0.35
VPS33B-208ENST00000574755 GRK6P43250 576 aa12.84□□□□□ -0.35
VPS33B-208ENST00000574755 FOXL2P58012 376 aa12.84□□□□□ -0.35
VPS33B-208ENST00000574755 PLCXD2Q0VAA5 305 aa12.84□□□□□ -0.35
VPS33B-208ENST00000574755 VASNQ6EMK4 673 aa12.84□□□□□ -0.35
VPS33B-208ENST00000574755 DPY19L2P2Q6ZN68 376 aa12.84□□□□□ -0.35
VPS33B-208ENST00000574755 POC5Q8NA72 575 aa12.84□□□□□ -0.35
VPS33B-208ENST00000574755 SMAP2Q8WU79 429 aaPredicted RBP12.84□□□□□ -0.35
VPS33B-208ENST00000574755 SMPDL3BQ92485 455 aa12.84□□□□□ -0.35
VPS33B-208ENST00000574755 LRFN5Q96NI6 719 aa12.84□□□□□ -0.35
VPS33B-208ENST00000574755 TIMP4Q99727 224 aa12.84□□□□□ -0.35
VPS33B-208ENST00000574755 SYNDIG1Q9H7V2 258 aa12.84□□□□□ -0.35
VPS33B-208ENST00000574755 KLHL1Q9NR64 748 aa12.84□□□□□ -0.35
VPS33B-208ENST00000574755 HAO2Q9NYQ3 351 aa12.84□□□□□ -0.35
VPS33B-208ENST00000574755 PLEKHB1Q9UF11 243 aaPredicted RBP12.84□□□□□ -0.35
VPS33B-208ENST00000574755 KLHL21Q9UJP4 597 aa12.84□□□□□ -0.35
VPS33B-208ENST00000574755 CMAHPQ9Y471 501 aa12.84□□□□□ -0.35
VPS33B-208ENST00000574755 MUC3AQ02505 3323 aa12.84□□□□□ -0.35
VPS33B-208ENST00000574755 A0A1B0GTQ1 180 aa12.84□□□□□ -0.35
VPS33B-208ENST00000574755 HCRTR2O43614 444 aa12.84□□□□□ -0.35
VPS33B-208ENST00000574755 MST1P26927 711 aa12.84□□□□□ -0.35
VPS33B-208ENST00000574755 POU4F2Q12837 409 aa12.84□□□□□ -0.35
VPS33B-208ENST00000574755 INSL4Q14641 139 aa12.84□□□□□ -0.35
VPS33B-208ENST00000574755 RHBDD2Q6NTF9 364 aa12.84□□□□□ -0.35
VPS33B-208ENST00000574755 MARCH9Q86YJ5 346 aa12.84□□□□□ -0.35
VPS33B-208ENST00000574755 NEIL3Q8TAT5 605 aa12.84□□□□□ -0.35
VPS33B-208ENST00000574755 ASB15Q8WXK1 588 aa12.84□□□□□ -0.35
VPS33B-208ENST00000574755 OR6C1Q96RD1 312 aa12.84□□□□□ -0.35
VPS33B-208ENST00000574755 RTN4RQ9BZR6 473 aa12.84□□□□□ -0.35
VPS33B-208ENST00000574755 ASB6Q9NWX5 421 aa12.84□□□□□ -0.35
VPS33B-208ENST00000574755 TNRC6BQ9UPQ9 1833 aaKnown RBP12.83□□□□□ -0.36
VPS33B-208ENST00000574755 CD8B2A6NJW9 211 aa12.83□□□□□ -0.36
VPS33B-208ENST00000574755 BLOC1S5-TXNDC5H3BN57 136 aa12.83□□□□□ -0.36
VPS33B-208ENST00000574755 RNF13O43567 381 aa12.83□□□□□ -0.36
VPS33B-208ENST00000574755 SIGLEC6O43699 453 aa12.83□□□□□ -0.36
VPS33B-208ENST00000574755 MT-ND5P03915 603 aa12.83□□□□□ -0.36
VPS33B-208ENST00000574755 CD8BP10966 210 aa12.83□□□□□ -0.36
VPS33B-208ENST00000574755 PRPS1P60891 318 aa12.83□□□□□ -0.36
VPS33B-208ENST00000574755 RPS4XP62701 263 aaKnown RBP12.83□□□□□ -0.36
VPS33B-208ENST00000574755 ACTC1P68032 377 aa12.83□□□□□ -0.36
VPS33B-208ENST00000574755 ACTA1P68133 377 aa12.83□□□□□ -0.36
VPS33B-208ENST00000574755 ACY1Q03154 408 aa12.83□□□□□ -0.36
VPS33B-208ENST00000574755 ZNF117Q03924 483 aa12.83□□□□□ -0.36
VPS33B-208ENST00000574755 COX15Q7KZN9 410 aa12.83□□□□□ -0.36
VPS33B-208ENST00000574755 KANSL1Q7Z3B3 1105 aa12.83□□□□□ -0.36
VPS33B-208ENST00000574755 OR51L1Q8NGJ5 315 aa12.83□□□□□ -0.36
VPS33B-208ENST00000574755 STT3BQ8TCJ2 826 aa12.83□□□□□ -0.36
VPS33B-208ENST00000574755 SAP25Q8TEE9 199 aa12.83□□□□□ -0.36
VPS33B-208ENST00000574755 ZMYND19Q96E35 227 aaPredicted RBP12.83□□□□□ -0.36
VPS33B-208ENST00000574755 TMEM43Q9BTV4 400 aa12.83□□□□□ -0.36
VPS33B-208ENST00000574755 NANSQ9NR45 359 aa12.83□□□□□ -0.36
VPS33B-208ENST00000574755 SUSD2Q9UGT4 822 aa12.83□□□□□ -0.36
VPS33B-208ENST00000574755 PILRBQ9UKJ0 227 aa12.83□□□□□ -0.36
VPS33B-208ENST00000574755 A0A1W2PQL4 384 aaPredicted RBP12.83□□□□□ -0.36
VPS33B-208ENST00000574755 C19orf67A6NJJ6 358 aa12.83□□□□□ -0.36
VPS33B-208ENST00000574755 NDUFB5O43674 189 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms