RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 AQP4P55087 323 aa13.94□□□□□ -0.18
HERPUD1-219ENST00000570273 PRKCDQ05655 676 aa13.94□□□□□ -0.18
HERPUD1-219ENST00000570273 SELENBP1Q13228 472 aa13.94□□□□□ -0.18
HERPUD1-219ENST00000570273 GLYR1Q49A26 553 aaPredicted RBP13.94□□□□□ -0.18
HERPUD1-219ENST00000570273 KDM4DQ6B0I6 523 aa13.94□□□□□ -0.18
HERPUD1-219ENST00000570273 C3orf33Q6P1S2 294 aa13.94□□□□□ -0.18
HERPUD1-219ENST00000570273 Q6ZS92 163 aa13.94□□□□□ -0.18
HERPUD1-219ENST00000570273 PRICKLE2Q7Z3G6 844 aa13.94□□□□□ -0.18
HERPUD1-219ENST00000570273 GALNT5Q7Z7M9 940 aa13.94□□□□□ -0.18
HERPUD1-219ENST00000570273 CDK20Q8IZL9 346 aa13.94□□□□□ -0.18
HERPUD1-219ENST00000570273 ATP6V1C2Q8NEY4 427 aa13.94□□□□□ -0.18
HERPUD1-219ENST00000570273 GNPDA2Q8TDQ7 276 aa13.94□□□□□ -0.18
HERPUD1-219ENST00000570273 SFXN2Q96NB2 322 aa13.94□□□□□ -0.18
HERPUD1-219ENST00000570273 UBL7Q96S82 380 aaPredicted RBP13.94□□□□□ -0.18
HERPUD1-219ENST00000570273 NIPSNAP1Q9BPW8 284 aa13.94□□□□□ -0.18
HERPUD1-219ENST00000570273 PIGQQ9BRB3 760 aa13.94□□□□□ -0.18
HERPUD1-219ENST00000570273 PRORYQ9H606 182 aa13.94□□□□□ -0.18
HERPUD1-219ENST00000570273 TMEM185BQ9H7F4 350 aa13.94□□□□□ -0.18
HERPUD1-219ENST00000570273 MEPEQ9NQ76 525 aaPredicted RBP13.94□□□□□ -0.18
HERPUD1-219ENST00000570273 KRT84Q9NSB2 600 aa13.94□□□□□ -0.18
HERPUD1-219ENST00000570273 EML6Q6ZMW3 1958 aa13.94□□□□□ -0.18
HERPUD1-219ENST00000570273 A8MVM7 634 aa13.93□□□□□ -0.18
HERPUD1-219ENST00000570273 MITFO75030 526 aaPredicted RBP13.93□□□□□ -0.18
HERPUD1-219ENST00000570273 TFPIP10646 304 aa13.93□□□□□ -0.18
HERPUD1-219ENST00000570273 PEPDP12955 493 aa13.93□□□□□ -0.18
HERPUD1-219ENST00000570273 IL11P20809 199 aa13.93□□□□□ -0.18
HERPUD1-219ENST00000570273 OMPP47874 163 aa13.93□□□□□ -0.18
HERPUD1-219ENST00000570273 CTBP2P56545 445 aa13.93□□□□□ -0.18
HERPUD1-219ENST00000570273 HYAL4Q2M3T9 481 aa13.93□□□□□ -0.18
HERPUD1-219ENST00000570273 TMEM44Q2T9K0 475 aa13.93□□□□□ -0.18
HERPUD1-219ENST00000570273 LINC00303Q3SY05 128 aa13.93□□□□□ -0.18
HERPUD1-219ENST00000570273 WIPI1Q5MNZ9 446 aaPredicted RBP13.93□□□□□ -0.18
HERPUD1-219ENST00000570273 C1orf94Q6P1W5 598 aa13.93□□□□□ -0.18
HERPUD1-219ENST00000570273 FAM109AQ8N4B1 249 aa13.93□□□□□ -0.18
HERPUD1-219ENST00000570273 C10orf53Q8N6V4 93 aa13.93□□□□□ -0.18
HERPUD1-219ENST00000570273 STK35Q8TDR2 534 aa13.93□□□□□ -0.18
HERPUD1-219ENST00000570273 DNAJC9Q8WXX5 260 aa13.93□□□□□ -0.18
HERPUD1-219ENST00000570273 RELTQ969Z4 430 aa13.93□□□□□ -0.18
HERPUD1-219ENST00000570273 DDIT4LQ96D03 193 aa13.93□□□□□ -0.18
HERPUD1-219ENST00000570273 BPIFA2Q96DR5 249 aa13.93□□□□□ -0.18
HERPUD1-219ENST00000570273 SGTBQ96EQ0 304 aa13.93□□□□□ -0.18
HERPUD1-219ENST00000570273 UCK2Q9BZX2 261 aa13.93□□□□□ -0.18
HERPUD1-219ENST00000570273 OR11A1Q9GZK7 315 aa13.93□□□□□ -0.18
HERPUD1-219ENST00000570273 PAPOLBQ9NRJ5 636 aaKnown RBP13.93□□□□□ -0.18
HERPUD1-219ENST00000570273 C20orf141Q9NUB4 165 aa13.93□□□□□ -0.18
HERPUD1-219ENST00000570273 QPCTLQ9NXS2 382 aa13.93□□□□□ -0.18
HERPUD1-219ENST00000570273 TMEFF2Q9UIK5 374 aaPredicted RBP13.93□□□□□ -0.18
HERPUD1-219ENST00000570273 POFUT2Q9Y2G5 429 aa13.93□□□□□ -0.18
HERPUD1-219ENST00000570273 MRPS18CQ9Y3D5 142 aaKnown RBP13.93□□□□□ -0.18
HERPUD1-219ENST00000570273 TRAV36DV7A0A075B6V5 113 aa13.92□□□□□ -0.18
HERPUD1-219ENST00000570273 ZC3H12DA2A288 527 aaKnown RBP13.92□□□□□ -0.18
HERPUD1-219ENST00000570273 EFCAB9A8MZ26 197 aa13.92□□□□□ -0.18
HERPUD1-219ENST00000570273 H3BML4 177 aa13.92□□□□□ -0.18
HERPUD1-219ENST00000570273 TFECO14948 347 aaPredicted RBP13.92□□□□□ -0.18
HERPUD1-219ENST00000570273 ZNF208O43345 1280 aa13.92□□□□□ -0.18
HERPUD1-219ENST00000570273 AHSA1O95433 338 aa13.92□□□□□ -0.18
HERPUD1-219ENST00000570273 HPNP05981 417 aa13.92□□□□□ -0.18
HERPUD1-219ENST00000570273 CELA3AP09093 270 aa13.92□□□□□ -0.18
HERPUD1-219ENST00000570273 SAGP10523 405 aaPredicted RBP13.92□□□□□ -0.18
HERPUD1-219ENST00000570273 ZNF24P17028 368 aa13.92□□□□□ -0.18
HERPUD1-219ENST00000570273 CDH2P19022 906 aaPredicted RBP13.92□□□□□ -0.18
HERPUD1-219ENST00000570273 MAKP20794 623 aa13.92□□□□□ -0.18
HERPUD1-219ENST00000570273 FPR3P25089 353 aa13.92□□□□□ -0.18
HERPUD1-219ENST00000570273 RAD23AP54725 363 aa13.92□□□□□ -0.18
HERPUD1-219ENST00000570273 B3GALT5-AS1P59052 145 aa13.92□□□□□ -0.18
HERPUD1-219ENST00000570273 EGR4Q05215 589 aa13.92□□□□□ -0.18
HERPUD1-219ENST00000570273 C1orf140Q5VVS0 124 aa13.92□□□□□ -0.18
HERPUD1-219ENST00000570273 C5orf46Q6UWT4 87 aa13.92□□□□□ -0.18
HERPUD1-219ENST00000570273 SLC25A43Q8WUT9 341 aaPredicted RBP13.92□□□□□ -0.18
HERPUD1-219ENST00000570273 SMPDL3BQ92485 455 aa13.92□□□□□ -0.18
HERPUD1-219ENST00000570273 KTI12Q96EK9 354 aaPredicted RBP13.92□□□□□ -0.18
HERPUD1-219ENST00000570273 GPA33Q99795 319 aa13.92□□□□□ -0.18
HERPUD1-219ENST00000570273 ADNPQ9H2P0 1102 aa13.92□□□□□ -0.18
HERPUD1-219ENST00000570273 ZNF71Q9NQZ8 489 aaPredicted RBP13.92□□□□□ -0.18
HERPUD1-219ENST00000570273 SMPD3Q9NY59 655 aaPredicted RBP13.92□□□□□ -0.18
HERPUD1-219ENST00000570273 TUBD1Q9UJT1 453 aa13.92□□□□□ -0.18
HERPUD1-219ENST00000570273 B3GNT3Q9Y2A9 372 aa13.92□□□□□ -0.18
HERPUD1-219ENST00000570273 TNRC6AQ8NDV7 1962 aaKnown RBP13.92□□□□□ -0.18
HERPUD1-219ENST00000570273 ATMQ13315 3056 aa13.92□□□□□ -0.18
HERPUD1-219ENST00000570273 UNC119BA6NIH7 251 aa13.91□□□□□ -0.18
HERPUD1-219ENST00000570273 KLF4O43474 513 aa13.91□□□□□ -0.18
HERPUD1-219ENST00000570273 EFNA2O43921 213 aa13.91□□□□□ -0.18
HERPUD1-219ENST00000570273 OR7A10O76100 309 aa13.91□□□□□ -0.18
HERPUD1-219ENST00000570273 CH25HO95992 272 aa13.91□□□□□ -0.18
HERPUD1-219ENST00000570273 GSTM3P21266 225 aa13.91□□□□□ -0.18
HERPUD1-219ENST00000570273 SFTPDP35247 375 aa13.91□□□□□ -0.18
HERPUD1-219ENST00000570273 GSSP48637 474 aa13.91□□□□□ -0.18
HERPUD1-219ENST00000570273 MAP2K6P52564 334 aa13.91□□□□□ -0.18
HERPUD1-219ENST00000570273 TSPAN31Q12999 210 aa13.91□□□□□ -0.18
HERPUD1-219ENST00000570273 RFX4Q33E94 735 aa13.91□□□□□ -0.18
HERPUD1-219ENST00000570273 ZIK1Q3SY52 487 aaPredicted RBP13.91□□□□□ -0.18
HERPUD1-219ENST00000570273 SYT14P1Q58G82 188 aa13.91□□□□□ -0.18
HERPUD1-219ENST00000570273 RNFT1Q5M7Z0 435 aa13.91□□□□□ -0.18
HERPUD1-219ENST00000570273 SLC6A19Q695T7 634 aa13.91□□□□□ -0.18
HERPUD1-219ENST00000570273 KLHL17Q6TDP4 642 aa13.91□□□□□ -0.18
HERPUD1-219ENST00000570273 DNAJA3Q96EY1 480 aa13.91□□□□□ -0.18
HERPUD1-219ENST00000570273 SLC6A15Q9H2J7 730 aa13.91□□□□□ -0.18
HERPUD1-219ENST00000570273 RIBC2Q9H4K1 309 aa13.91□□□□□ -0.18
HERPUD1-219ENST00000570273 LHX6Q9UPM6 363 aa13.91□□□□□ -0.18
HERPUD1-219ENST00000570273 CACNA1GO43497 2377 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms