RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 SPAG4Q9NPE6 437 aa11.46□□□□□ -0.57
CDT1-203ENST00000569140 PROCRQ9UNN8 238 aa11.46□□□□□ -0.57
CDT1-203ENST00000569140 SLC9A8Q9Y2E8 581 aa11.46□□□□□ -0.57
CDT1-203ENST00000569140 SH3GLB1Q9Y371 365 aa11.46□□□□□ -0.57
CDT1-203ENST00000569140 HDGFL3Q9Y3E1 203 aa11.46□□□□□ -0.57
CDT1-203ENST00000569140 FLNCQ14315 2725 aa11.46□□□□□ -0.58
CDT1-203ENST00000569140 ZC3H12DA2A288 527 aaKnown RBP11.45□□□□□ -0.58
CDT1-203ENST00000569140 SYT5O00445 386 aa11.45□□□□□ -0.58
CDT1-203ENST00000569140 CXCR6O00574 342 aa11.45□□□□□ -0.58
CDT1-203ENST00000569140 ZNF208O43345 1280 aa11.45□□□□□ -0.58
CDT1-203ENST00000569140 GMNNO75496 209 aa11.45□□□□□ -0.58
CDT1-203ENST00000569140 TNFSF13O75888 250 aa11.45□□□□□ -0.58
CDT1-203ENST00000569140 PMS2P2O95744 297 aa11.45□□□□□ -0.58
CDT1-203ENST00000569140 ZNF682O95780 498 aa11.45□□□□□ -0.58
CDT1-203ENST00000569140 LGI1O95970 557 aa11.45□□□□□ -0.58
CDT1-203ENST00000569140 IL18BPO95998 194 aa11.45□□□□□ -0.58
CDT1-203ENST00000569140 CRHP06850 196 aa11.45□□□□□ -0.58
CDT1-203ENST00000569140 TCN1P20061 433 aaPredicted RBP11.45□□□□□ -0.58
CDT1-203ENST00000569140 TNFRSF1BP20333 461 aa11.45□□□□□ -0.58
CDT1-203ENST00000569140 CD247P20963 164 aa11.45□□□□□ -0.58
CDT1-203ENST00000569140 FKBP2P26885 142 aaKnown RBP11.45□□□□□ -0.58
CDT1-203ENST00000569140 GTF2E2P29084 291 aaKnown RBP11.45□□□□□ -0.58
CDT1-203ENST00000569140 GSK3BP49841 420 aa11.45□□□□□ -0.58
CDT1-203ENST00000569140 DLX5P56178 289 aa11.45□□□□□ -0.58
CDT1-203ENST00000569140 SLC25A3Q00325 362 aa11.45□□□□□ -0.58
CDT1-203ENST00000569140 FOXD4Q12950 439 aaPredicted RBP11.45□□□□□ -0.58
CDT1-203ENST00000569140 RNPS1Q15287 305 aaKnown RBP11.45□□□□□ -0.58
CDT1-203ENST00000569140 OR1Q1Q15612 314 aa11.45□□□□□ -0.58
CDT1-203ENST00000569140 OR7A5Q15622 319 aa11.45□□□□□ -0.58
CDT1-203ENST00000569140 EXOC3L2Q2M3D2 409 aa11.45□□□□□ -0.58
CDT1-203ENST00000569140 CYBRD1Q53TN4 286 aa11.45□□□□□ -0.58
CDT1-203ENST00000569140 EEF1A1P5Q5VTE0 462 aa11.45□□□□□ -0.58
CDT1-203ENST00000569140 C16orf89Q6UX73 402 aa11.45□□□□□ -0.58
CDT1-203ENST00000569140 DEF8Q6ZN54 512 aa11.45□□□□□ -0.58
CDT1-203ENST00000569140 FAM214BQ7L5A3 538 aa11.45□□□□□ -0.58
CDT1-203ENST00000569140 BTLAQ7Z6A9 289 aa11.45□□□□□ -0.58
CDT1-203ENST00000569140 ATG4DQ86TL0 474 aaPredicted RBP11.45□□□□□ -0.58
CDT1-203ENST00000569140 FITM2Q8N6M3 262 aa11.45□□□□□ -0.58
CDT1-203ENST00000569140 RNF148Q8N7C7 305 aa11.45□□□□□ -0.58
CDT1-203ENST00000569140 RNF128Q8TEB7 428 aa11.45□□□□□ -0.58
CDT1-203ENST00000569140 ARHGDIGQ99819 225 aa11.45□□□□□ -0.58
CDT1-203ENST00000569140 WFDC6Q9BQY6 131 aa11.45□□□□□ -0.58
CDT1-203ENST00000569140 EVA1AQ9H8M9 152 aa11.45□□□□□ -0.58
CDT1-203ENST00000569140 NPDC1Q9NQX5 325 aaPredicted RBP11.45□□□□□ -0.58
CDT1-203ENST00000569140 GLRX2Q9NS18 164 aa11.45□□□□□ -0.58
CDT1-203ENST00000569140 ADPRHL2Q9NX46 363 aa11.45□□□□□ -0.58
CDT1-203ENST00000569140 C6orf203Q9P0P8 240 aaPredicted RBP11.45□□□□□ -0.58
CDT1-203ENST00000569140 TMEM181Q9P2C4 612 aa11.45□□□□□ -0.58
CDT1-203ENST00000569140 KLHL9Q9P2J3 617 aa11.45□□□□□ -0.58
CDT1-203ENST00000569140 KLHL13Q9P2N7 655 aa11.45□□□□□ -0.58
CDT1-203ENST00000569140 BAG5Q9UL15 447 aa11.45□□□□□ -0.58
CDT1-203ENST00000569140 DOCK7Q96N67 2140 aa11.45□□□□□ -0.58
CDT1-203ENST00000569140 A8MVM7 634 aa11.44□□□□□ -0.58
CDT1-203ENST00000569140 SMAD9O15198 467 aaKnown RBP11.44□□□□□ -0.58
CDT1-203ENST00000569140 PRKD3O94806 890 aa11.44□□□□□ -0.58
CDT1-203ENST00000569140 AHSA1O95433 338 aa11.44□□□□□ -0.58
CDT1-203ENST00000569140 GPIP06744 558 aa11.44□□□□□ -0.58
CDT1-203ENST00000569140 C8BP07358 591 aa11.44□□□□□ -0.58
CDT1-203ENST00000569140 NCK1P16333 377 aa11.44□□□□□ -0.58
CDT1-203ENST00000569140 KLK2P20151 261 aa11.44□□□□□ -0.58
CDT1-203ENST00000569140 FPR1P21462 350 aa11.44□□□□□ -0.58
CDT1-203ENST00000569140 KDELR2P33947 212 aa11.44□□□□□ -0.58
CDT1-203ENST00000569140 KIR2DL2P43627 348 aaPredicted RBP11.44□□□□□ -0.58
CDT1-203ENST00000569140 CLK1P49759 484 aaKnown RBP11.44□□□□□ -0.58
CDT1-203ENST00000569140 SLC35A1P78382 337 aa11.44□□□□□ -0.58
CDT1-203ENST00000569140 TFF3Q07654 80 aa11.44□□□□□ -0.58
CDT1-203ENST00000569140 RASGEF1BQ0VAM2 473 aa11.44□□□□□ -0.58
CDT1-203ENST00000569140 CEACAM7Q14002 265 aa11.44□□□□□ -0.58
CDT1-203ENST00000569140 NRF1Q16656 503 aa11.44□□□□□ -0.58
CDT1-203ENST00000569140 ENTPD8Q5MY95 495 aa11.44□□□□□ -0.58
CDT1-203ENST00000569140 C1orf140Q5VVS0 124 aa11.44□□□□□ -0.58
CDT1-203ENST00000569140 C8orf82Q6P1X6 216 aaPredicted RBP11.44□□□□□ -0.58
CDT1-203ENST00000569140 ULK3Q6PHR2 472 aa11.44□□□□□ -0.58
CDT1-203ENST00000569140 CARM1Q86X55 608 aa11.44□□□□□ -0.58
CDT1-203ENST00000569140 RBM45Q8IUH3 476 aaKnown RBP11.44□□□□□ -0.58
CDT1-203ENST00000569140 P3H2Q8IVL5 708 aa11.44□□□□□ -0.58
CDT1-203ENST00000569140 TUSC5Q8IXB3 177 aa11.44□□□□□ -0.58
CDT1-203ENST00000569140 PGAM4Q8N0Y7 254 aa11.44□□□□□ -0.58
CDT1-203ENST00000569140 SLC43A2Q8N370 569 aa11.44□□□□□ -0.58
CDT1-203ENST00000569140 OR6T1Q8NGN1 323 aa11.44□□□□□ -0.58
CDT1-203ENST00000569140 DNAJA4Q8WW22 397 aaPredicted RBP11.44□□□□□ -0.58
CDT1-203ENST00000569140 LZICQ8WZA0 190 aa11.44□□□□□ -0.58
CDT1-203ENST00000569140 RNASE6Q93091 150 aaKnown RBP11.44□□□□□ -0.58
CDT1-203ENST00000569140 MARVELD3Q96A59 401 aa11.44□□□□□ -0.58
CDT1-203ENST00000569140 ZNF775Q96BV0 537 aaPredicted RBP11.44□□□□□ -0.58
CDT1-203ENST00000569140 SLC25A36Q96CQ1 311 aa11.44□□□□□ -0.58
CDT1-203ENST00000569140 NAA11Q9BSU3 229 aaPredicted RBP11.44□□□□□ -0.58
CDT1-203ENST00000569140 NDE1Q9NXR1 346 aa11.44□□□□□ -0.58
CDT1-203ENST00000569140 GALNT8Q9NY28 637 aa11.44□□□□□ -0.58
CDT1-203ENST00000569140 EGFL7Q9UHF1 273 aa11.44□□□□□ -0.58
CDT1-203ENST00000569140 COL12A1Q99715 3063 aa11.44□□□□□ -0.58
CDT1-203ENST00000569140 HNRNPRO43390 633 aaKnown RBP11.43□□□□□ -0.58
CDT1-203ENST00000569140 SS18L1O75177 396 aaPredicted RBP11.43□□□□□ -0.58
CDT1-203ENST00000569140 SERPINA1P01009 418 aa11.43□□□□□ -0.58
CDT1-203ENST00000569140 PNMTP11086 282 aa11.43□□□□□ -0.58
CDT1-203ENST00000569140 IMPDH2P12268 514 aa11.43□□□□□ -0.58
CDT1-203ENST00000569140 CBLP22681 906 aa11.43□□□□□ -0.58
CDT1-203ENST00000569140 AGTR1P30556 359 aa11.43□□□□□ -0.58
CDT1-203ENST00000569140 RPS5P46782 204 aaKnown RBP11.43□□□□□ -0.58
CDT1-203ENST00000569140 OR1E2P47887 323 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms