RNA–Protein interactions for RNA: ENST00000568605.5

CLK3-224, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,047 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-224ENST00000568605 C8BP07358 591 aa11.61□□□□□ -0.55
CLK3-224ENST00000568605 PNMTP11086 282 aa11.61□□□□□ -0.55
CLK3-224ENST00000568605 CCNA2P20248 432 aa11.61□□□□□ -0.55
CLK3-224ENST00000568605 GTF2E2P29084 291 aaKnown RBP11.61□□□□□ -0.55
CLK3-224ENST00000568605 AGTR1P30556 359 aa11.61□□□□□ -0.55
CLK3-224ENST00000568605 SSTR2P30874 369 aa11.61□□□□□ -0.55
CLK3-224ENST00000568605 IDUAP35475 653 aa11.61□□□□□ -0.55
CLK3-224ENST00000568605 KCNJ5P48544 419 aa11.61□□□□□ -0.55
CLK3-224ENST00000568605 SLC35A1P78382 337 aa11.61□□□□□ -0.55
CLK3-224ENST00000568605 DMTNQ08495 405 aa11.61□□□□□ -0.55
CLK3-224ENST00000568605 GUSBP1Q15486 140 aa11.61□□□□□ -0.55
CLK3-224ENST00000568605 ELOA3BQ3SY89 546 aa11.61□□□□□ -0.55
CLK3-224ENST00000568605 ALG10BQ5I7T1 473 aa11.61□□□□□ -0.55
CLK3-224ENST00000568605 CALHM3Q86XJ0 350 aa11.61□□□□□ -0.55
CLK3-224ENST00000568605 TREML1Q86YW5 311 aa11.61□□□□□ -0.55
CLK3-224ENST00000568605 DMRTC2Q8IXT2 367 aaPredicted RBP11.61□□□□□ -0.55
CLK3-224ENST00000568605 LSMEM1Q8N8F7 131 aa11.61□□□□□ -0.55
CLK3-224ENST00000568605 SMYD1Q8NB12 490 aa11.61□□□□□ -0.55
CLK3-224ENST00000568605 ACBD4Q8NC06 268 aa11.61□□□□□ -0.55
CLK3-224ENST00000568605 ELOA3Q8NG57 546 aa11.61□□□□□ -0.55
CLK3-224ENST00000568605 ABHD3Q8WU67 409 aa11.61□□□□□ -0.55
CLK3-224ENST00000568605 ROBO4Q8WZ75 1007 aa11.61□□□□□ -0.55
CLK3-224ENST00000568605 C3orf49Q96BT1 292 aa11.61□□□□□ -0.55
CLK3-224ENST00000568605 ZNF524Q96C55 264 aa11.61□□□□□ -0.55
CLK3-224ENST00000568605 TAPBPLQ9BX59 468 aa11.61□□□□□ -0.55
CLK3-224ENST00000568605 OR11A1Q9GZK7 315 aa11.61□□□□□ -0.55
CLK3-224ENST00000568605 ADAM19Q9H013 955 aa11.61□□□□□ -0.55
CLK3-224ENST00000568605 PIF1Q9H611 641 aa11.61□□□□□ -0.55
CLK3-224ENST00000568605 TMEM27Q9HBJ8 222 aa11.61□□□□□ -0.55
CLK3-224ENST00000568605 GALNT8Q9NY28 637 aa11.61□□□□□ -0.55
CLK3-224ENST00000568605 EMC3Q9P0I2 261 aa11.61□□□□□ -0.55
CLK3-224ENST00000568605 TRAPPC4Q9Y296 219 aa11.61□□□□□ -0.55
CLK3-224ENST00000568605 SLC9A8Q9Y2E8 581 aa11.61□□□□□ -0.55
CLK3-224ENST00000568605 ANKRD17O75179 2603 aaKnown RBP11.61□□□□□ -0.55
CLK3-224ENST00000568605 TMEM72A0PK05 275 aa11.6□□□□□ -0.55
CLK3-224ENST00000568605 ELOVL7A1L3X0 281 aa11.6□□□□□ -0.55
CLK3-224ENST00000568605 A8MVM7 634 aa11.6□□□□□ -0.55
CLK3-224ENST00000568605 A8MXE2 369 aa11.6□□□□□ -0.55
CLK3-224ENST00000568605 M0QX08 132 aa11.6□□□□□ -0.55
CLK3-224ENST00000568605 SMAD9O15198 467 aaKnown RBP11.6□□□□□ -0.55
CLK3-224ENST00000568605 CYTIPO60759 359 aa11.6□□□□□ -0.55
CLK3-224ENST00000568605 AHSA1O95433 338 aa11.6□□□□□ -0.55
CLK3-224ENST00000568605 FAM107AO95990 144 aa11.6□□□□□ -0.55
CLK3-224ENST00000568605 GPIP06744 558 aa11.6□□□□□ -0.55
CLK3-224ENST00000568605 PRG2P13727 222 aa11.6□□□□□ -0.55
CLK3-224ENST00000568605 KIR2DL2P43627 348 aaPredicted RBP11.6□□□□□ -0.55
CLK3-224ENST00000568605 PCYT1AP49585 367 aa11.6□□□□□ -0.55
CLK3-224ENST00000568605 OR2B6P58173 313 aa11.6□□□□□ -0.55
CLK3-224ENST00000568605 SWT1Q5T5J6 900 aaKnown RBP11.6□□□□□ -0.55
CLK3-224ENST00000568605 FAM91A1Q658Y4 838 aa11.6□□□□□ -0.55
CLK3-224ENST00000568605 ABLIM2Q6H8Q1 611 aa11.6□□□□□ -0.55
CLK3-224ENST00000568605 ULK3Q6PHR2 472 aa11.6□□□□□ -0.55
CLK3-224ENST00000568605 CCDC80Q76M96 950 aa11.6□□□□□ -0.55
CLK3-224ENST00000568605 PIGWQ7Z7B1 504 aa11.6□□□□□ -0.55
CLK3-224ENST00000568605 MICU2Q8IYU8 434 aa11.6□□□□□ -0.55
CLK3-224ENST00000568605 ANKS4BQ8N8V4 417 aa11.6□□□□□ -0.55
CLK3-224ENST00000568605 PROX1Q92786 737 aa11.6□□□□□ -0.55
CLK3-224ENST00000568605 STARD4Q96DR4 205 aa11.6□□□□□ -0.55
CLK3-224ENST00000568605 C14orf79Q96F83 325 aa11.6□□□□□ -0.55
CLK3-224ENST00000568605 ARL5BQ96KC2 179 aa11.6□□□□□ -0.55
CLK3-224ENST00000568605 NAA11Q9BSU3 229 aaPredicted RBP11.6□□□□□ -0.55
CLK3-224ENST00000568605 POTEKPQ9BYX7 375 aa11.6□□□□□ -0.55
CLK3-224ENST00000568605 ALG2Q9H553 416 aa11.6□□□□□ -0.55
CLK3-224ENST00000568605 SPAG4Q9NPE6 437 aa11.6□□□□□ -0.55
CLK3-224ENST00000568605 NDE1Q9NXR1 346 aa11.6□□□□□ -0.55
CLK3-224ENST00000568605 ELOVL5Q9NYP7 299 aa11.6□□□□□ -0.55
CLK3-224ENST00000568605 BAG5Q9UL15 447 aa11.6□□□□□ -0.55
CLK3-224ENST00000568605 CLEC4AQ9UMR7 237 aa11.6□□□□□ -0.55
CLK3-224ENST00000568605 IGHV3-15A0A0B4J1V0 119 aa11.59□□□□□ -0.55
CLK3-224ENST00000568605 TUBAL3A6NHL2 446 aa11.59□□□□□ -0.55
CLK3-224ENST00000568605 GSTA4O15217 222 aa11.59□□□□□ -0.55
CLK3-224ENST00000568605 TPST1O60507 370 aa11.59□□□□□ -0.55
CLK3-224ENST00000568605 FMO6PO60774 539 aa11.59□□□□□ -0.55
CLK3-224ENST00000568605 LGI1O95970 557 aa11.59□□□□□ -0.55
CLK3-224ENST00000568605 POU2F1P14859 743 aa11.59□□□□□ -0.55
CLK3-224ENST00000568605 CD79BP40259 229 aa11.59□□□□□ -0.55
CLK3-224ENST00000568605 KIR2DL3P43628 341 aa11.59□□□□□ -0.55
CLK3-224ENST00000568605 GZMMP51124 257 aa11.59□□□□□ -0.55
CLK3-224ENST00000568605 SLC7A2P52569 658 aa11.59□□□□□ -0.55
CLK3-224ENST00000568605 RASGEF1BQ0VAM2 473 aa11.59□□□□□ -0.55
CLK3-224ENST00000568605 GLIPR1L2Q4G1C9 344 aa11.59□□□□□ -0.55
CLK3-224ENST00000568605 LRRC23Q53EV4 343 aaPredicted RBP11.59□□□□□ -0.55
CLK3-224ENST00000568605 PAQR6Q6TCH4 344 aa11.59□□□□□ -0.55
CLK3-224ENST00000568605 C6orf89Q6UWU4 347 aa11.59□□□□□ -0.55
CLK3-224ENST00000568605 BEND4Q6ZU67 534 aa11.59□□□□□ -0.55
CLK3-224ENST00000568605 BTLAQ7Z6A9 289 aa11.59□□□□□ -0.55
CLK3-224ENST00000568605 ATG4DQ86TL0 474 aaPredicted RBP11.59□□□□□ -0.55
CLK3-224ENST00000568605 RNF217Q8TC41 542 aa11.59□□□□□ -0.55
CLK3-224ENST00000568605 STK35Q8TDR2 534 aa11.59□□□□□ -0.55
CLK3-224ENST00000568605 LZICQ8WZA0 190 aa11.59□□□□□ -0.55
CLK3-224ENST00000568605 TAMM41Q96BW9 452 aa11.59□□□□□ -0.55
CLK3-224ENST00000568605 SLC47A1Q96FL8 570 aa11.59□□□□□ -0.55
CLK3-224ENST00000568605 ZNF583Q96ND8 569 aa11.59□□□□□ -0.55
CLK3-224ENST00000568605 CCT8L2Q96SF2 557 aa11.59□□□□□ -0.55
CLK3-224ENST00000568605 ARHGDIGQ99819 225 aa11.59□□□□□ -0.55
CLK3-224ENST00000568605 PSD2Q9BQI7 771 aa11.59□□□□□ -0.55
CLK3-224ENST00000568605 GPATCH1Q9BRR8 931 aaKnown RBP11.59□□□□□ -0.55
CLK3-224ENST00000568605 OPN3Q9H1Y3 402 aaPredicted RBP11.59□□□□□ -0.55
CLK3-224ENST00000568605 BCO1Q9HAY6 547 aa11.59□□□□□ -0.55
CLK3-224ENST00000568605 ADGRG4Q8IZF6 3080 aa11.58□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms