RNA–Protein interactions for RNA: ENST00000567275.2

NIFKP4-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 4, humanhuman

BASIC

Gene NIFKP4, Length 1,192 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP4-201ENST00000567275 PIGHQ14442 188 aaPredicted RBP6.76□□□□□ -1.33
NIFKP4-201ENST00000567275 KRT71Q3SY84 523 aa6.76□□□□□ -1.33
NIFKP4-201ENST00000567275 MOGAT2Q3SYC2 334 aa6.76□□□□□ -1.33
NIFKP4-201ENST00000567275 HSP90AA4PQ58FG1 418 aa6.76□□□□□ -1.33
NIFKP4-201ENST00000567275 NKAIN2Q5VXU1 208 aa6.76□□□□□ -1.33
NIFKP4-201ENST00000567275 TTC27Q6P3X3 843 aa6.76□□□□□ -1.33
NIFKP4-201ENST00000567275 PAQR6Q6TCH4 344 aa6.76□□□□□ -1.33
NIFKP4-201ENST00000567275 RBM43Q6ZSC3 357 aaKnown RBP6.76□□□□□ -1.33
NIFKP4-201ENST00000567275 ATPAF2Q8N5M1 289 aa6.76□□□□□ -1.33
NIFKP4-201ENST00000567275 PDCD6IPQ8WUM4 868 aaKnown RBP6.76□□□□□ -1.33
NIFKP4-201ENST00000567275 PATE1Q8WXA2 126 aa6.76□□□□□ -1.33
NIFKP4-201ENST00000567275 FAM46BQ96A09 425 aa6.76□□□□□ -1.33
NIFKP4-201ENST00000567275 FAM111AQ96PZ2 611 aa6.76□□□□□ -1.33
NIFKP4-201ENST00000567275 POLR1EQ9GZS1 481 aaKnown RBP6.76□□□□□ -1.33
NIFKP4-201ENST00000567275 RAB33BQ9H082 229 aa6.76□□□□□ -1.33
NIFKP4-201ENST00000567275 CARD9Q9H257 536 aa6.76□□□□□ -1.33
NIFKP4-201ENST00000567275 HSD3B7Q9H2F3 369 aa6.76□□□□□ -1.33
NIFKP4-201ENST00000567275 SPTBN1Q01082 2364 aaKnown RBP6.76□□□□□ -1.33
NIFKP4-201ENST00000567275 A0A087X0K7 114 aa6.75□□□□□ -1.33
NIFKP4-201ENST00000567275 TRBV2A0A0J9YWF9 115 aa6.75□□□□□ -1.33
NIFKP4-201ENST00000567275 A8MX80 341 aa6.75□□□□□ -1.33
NIFKP4-201ENST00000567275 XRCC1P18887 633 aaPredicted RBP6.75□□□□□ -1.33
NIFKP4-201ENST00000567275 CETN2P41208 172 aa6.75□□□□□ -1.33
NIFKP4-201ENST00000567275 KLK7P49862 253 aa6.75□□□□□ -1.33
NIFKP4-201ENST00000567275 TMEM50BP56557 158 aa6.75□□□□□ -1.33
NIFKP4-201ENST00000567275 DCDC1P59894 354 aa6.75□□□□□ -1.33
NIFKP4-201ENST00000567275 MS4A2Q01362 244 aa6.75□□□□□ -1.33
NIFKP4-201ENST00000567275 GALK2Q01415 458 aa6.75□□□□□ -1.33
NIFKP4-201ENST00000567275 MYL5Q02045 173 aa6.75□□□□□ -1.33
NIFKP4-201ENST00000567275 NFATC2Q13469 925 aa6.75□□□□□ -1.33
NIFKP4-201ENST00000567275 ACKR1Q16570 336 aa6.75□□□□□ -1.33
NIFKP4-201ENST00000567275 HENMT1Q5T8I9 393 aaKnown RBP6.75□□□□□ -1.33
NIFKP4-201ENST00000567275 AGAP6Q5VW22 663 aa6.75□□□□□ -1.33
NIFKP4-201ENST00000567275 CES4AQ5XG92 561 aa6.75□□□□□ -1.33
NIFKP4-201ENST00000567275 LRRC66Q68CR7 880 aa6.75□□□□□ -1.33
NIFKP4-201ENST00000567275 PDPK2PQ6A1A2 396 aa6.75□□□□□ -1.33
NIFKP4-201ENST00000567275 ZNF770Q6IQ21 691 aaPredicted RBP6.75□□□□□ -1.33
NIFKP4-201ENST00000567275 WASH2PQ6VEQ5 465 aa6.75□□□□□ -1.33
NIFKP4-201ENST00000567275 CHMP1BQ7LBR1 199 aa6.75□□□□□ -1.33
NIFKP4-201ENST00000567275 TIPARPQ7Z3E1 657 aaKnown RBP6.75□□□□□ -1.33
NIFKP4-201ENST00000567275 ASPGQ86U10 573 aa6.75□□□□□ -1.33
NIFKP4-201ENST00000567275 HPS6Q86YV9 775 aa6.75□□□□□ -1.33
NIFKP4-201ENST00000567275 TMEM126BQ8IUX1 230 aa6.75□□□□□ -1.33
NIFKP4-201ENST00000567275 C9orf72Q96LT7 481 aa6.75□□□□□ -1.33
NIFKP4-201ENST00000567275 TSGA13Q96PP4 275 aa6.75□□□□□ -1.33
NIFKP4-201ENST00000567275 CSPG4P5Q96PW8 444 aa6.75□□□□□ -1.33
NIFKP4-201ENST00000567275 PEBP4Q96S96 227 aa6.75□□□□□ -1.33
NIFKP4-201ENST00000567275 TDRD1Q9BXT4 1180 aaKnown RBP6.75□□□□□ -1.33
NIFKP4-201ENST00000567275 ULBP3Q9BZM4 244 aa6.75□□□□□ -1.33
NIFKP4-201ENST00000567275 TSPYL1Q9H0U9 437 aa6.75□□□□□ -1.33
NIFKP4-201ENST00000567275 GPATCH2LQ9NWQ4 482 aa6.75□□□□□ -1.33
NIFKP4-201ENST00000567275 AIPL1Q9NZN9 384 aa6.75□□□□□ -1.33
NIFKP4-201ENST00000567275 TMEM9Q9P0T7 183 aa6.75□□□□□ -1.33
NIFKP4-201ENST00000567275 ACTR3BQ9P1U1 418 aa6.75□□□□□ -1.33
NIFKP4-201ENST00000567275 ANKRD36A6QL64 1941 aa6.75□□□□□ -1.33
NIFKP4-201ENST00000567275 USP9XQ93008 2570 aaPredicted RBP6.75□□□□□ -1.33
NIFKP4-201ENST00000567275 RP1L1Q8IWN7 2480 aaPredicted RBP6.74□□□□□ -1.33
NIFKP4-201ENST00000567275 TRAV18A0A075B6X5 111 aa6.74□□□□□ -1.33
NIFKP4-201ENST00000567275 MPTX1A8MV57 137 aa6.74□□□□□ -1.33
NIFKP4-201ENST00000567275 SOCS3O14543 225 aa6.74□□□□□ -1.33
NIFKP4-201ENST00000567275 CHUKO15111 745 aa6.74□□□□□ -1.33
NIFKP4-201ENST00000567275 CCNCP24863 283 aa6.74□□□□□ -1.33
NIFKP4-201ENST00000567275 UBE2IP63279 158 aaKnown RBP6.74□□□□□ -1.33
NIFKP4-201ENST00000567275 RAPSNQ13702 412 aa6.74□□□□□ -1.33
NIFKP4-201ENST00000567275 OPCMLQ14982 345 aa6.74□□□□□ -1.33
NIFKP4-201ENST00000567275 DEFB109BQ30KR1 87 aa6.74□□□□□ -1.33
NIFKP4-201ENST00000567275 ABRAXAS1Q6UWZ7 409 aa6.74□□□□□ -1.33
NIFKP4-201ENST00000567275 MFSD7Q6UXD7 560 aa6.74□□□□□ -1.33
NIFKP4-201ENST00000567275 SIGLEC15Q6ZMC9 328 aa6.74□□□□□ -1.33
NIFKP4-201ENST00000567275 FCRLAQ7L513 359 aa6.74□□□□□ -1.33
NIFKP4-201ENST00000567275 CATSPERDQ86XM0 798 aa6.74□□□□□ -1.33
NIFKP4-201ENST00000567275 CNPY4Q8N129 248 aa6.74□□□□□ -1.33
NIFKP4-201ENST00000567275 FAM89BQ8N5H3 189 aa6.74□□□□□ -1.33
NIFKP4-201ENST00000567275 PIK3R3Q92569 461 aa6.74□□□□□ -1.33
NIFKP4-201ENST00000567275 RIOK2Q9BVS4 552 aaKnown RBP6.74□□□□□ -1.33
NIFKP4-201ENST00000567275 SUDS3Q9H7L9 328 aaPredicted RBP6.74□□□□□ -1.33
NIFKP4-201ENST00000567275 B3GAT2Q9NPZ5 323 aa6.74□□□□□ -1.33
NIFKP4-201ENST00000567275 CHMP5Q9NZZ3 219 aa6.74□□□□□ -1.33
NIFKP4-201ENST00000567275 PCSK1NQ9UHG2 260 aa6.74□□□□□ -1.33
NIFKP4-201ENST00000567275 LCMT1Q9UIC8 334 aa6.74□□□□□ -1.33
NIFKP4-201ENST00000567275 TP53TG5Q9Y2B4 290 aa6.74□□□□□ -1.33
NIFKP4-201ENST00000567275 SELENOKQ9Y6D0 94 aa6.74□□□□□ -1.33
NIFKP4-201ENST00000567275 UNC79Q9P2D8 2635 aa6.74□□□□□ -1.33
NIFKP4-201ENST00000567275 C2orf92A0A1B0GVN3 265 aa6.73□□□□□ -1.33
NIFKP4-201ENST00000567275 CPA3P15088 417 aa6.73□□□□□ -1.33
NIFKP4-201ENST00000567275 CCNA2P20248 432 aa6.73□□□□□ -1.33
NIFKP4-201ENST00000567275 ELAVL4P26378 380 aaKnown RBP6.73□□□□□ -1.33
NIFKP4-201ENST00000567275 SFTPDP35247 375 aa6.73□□□□□ -1.33
NIFKP4-201ENST00000567275 SOX3P41225 446 aa6.73□□□□□ -1.33
NIFKP4-201ENST00000567275 SPINT3P49223 89 aa6.73□□□□□ -1.33
NIFKP4-201ENST00000567275 DSCR10P59022 87 aa6.73□□□□□ -1.33
NIFKP4-201ENST00000567275 MAXP61244 160 aa6.73□□□□□ -1.33
NIFKP4-201ENST00000567275 ABRQ12979 859 aa6.73□□□□□ -1.33
NIFKP4-201ENST00000567275 PAFAH1B3Q15102 231 aaKnown RBP6.73□□□□□ -1.33
NIFKP4-201ENST00000567275 TAB1Q15750 504 aa6.73□□□□□ -1.33
NIFKP4-201ENST00000567275 IGFBP7Q16270 282 aa6.73□□□□□ -1.33
NIFKP4-201ENST00000567275 GLIPR1L2Q4G1C9 344 aa6.73□□□□□ -1.33
NIFKP4-201ENST00000567275 CCDC183Q5T5S1 534 aa6.73□□□□□ -1.33
NIFKP4-201ENST00000567275 TMEM26Q6ZUK4 368 aa6.73□□□□□ -1.33
NIFKP4-201ENST00000567275 APTXQ7Z2E3 356 aaKnown RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms