RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 HDDC3Q8N4P3 179 aa2.04□□□□□ -2.08
HDGFL3-202ENST00000562702 CERS5Q8N5B7 392 aa2.04□□□□□ -2.08
HDGFL3-202ENST00000562702 LINC01555Q8NAE3 123 aa2.04□□□□□ -2.08
HDGFL3-202ENST00000562702 ZBTB44Q8NCP5 570 aa2.04□□□□□ -2.08
HDGFL3-202ENST00000562702 NFAM1Q8NET5 270 aaPredicted RBP2.04□□□□□ -2.08
HDGFL3-202ENST00000562702 SH3TC1Q8TE82 1336 aa2.04□□□□□ -2.08
HDGFL3-202ENST00000562702 RNF138Q8WVD3 245 aa2.04□□□□□ -2.08
HDGFL3-202ENST00000562702 SLC13A3Q8WWT9 602 aa2.04□□□□□ -2.08
HDGFL3-202ENST00000562702 NEIL2Q969S2 332 aa2.04□□□□□ -2.08
HDGFL3-202ENST00000562702 NCLNQ969V3 563 aa2.04□□□□□ -2.08
HDGFL3-202ENST00000562702 TMEM186Q96B77 213 aa2.04□□□□□ -2.08
HDGFL3-202ENST00000562702 ZBED3Q96IU2 234 aaPredicted RBP2.04□□□□□ -2.08
HDGFL3-202ENST00000562702 ZNF184Q99676 751 aaPredicted RBP2.04□□□□□ -2.08
HDGFL3-202ENST00000562702 TBC1D10AQ9BXI6 508 aa2.04□□□□□ -2.08
HDGFL3-202ENST00000562702 NMNAT2Q9BZQ4 307 aa2.04□□□□□ -2.08
HDGFL3-202ENST00000562702 CCSER1Q9C0I3 900 aa2.04□□□□□ -2.08
HDGFL3-202ENST00000562702 RIBC2Q9H4K1 309 aa2.04□□□□□ -2.08
HDGFL3-202ENST00000562702 NCOR1P1Q9H4R4 102 aa2.04□□□□□ -2.08
HDGFL3-202ENST00000562702 KAT8Q9H7Z6 458 aaKnown RBP2.04□□□□□ -2.08
HDGFL3-202ENST00000562702 COG4Q9H9E3 785 aa2.04□□□□□ -2.08
HDGFL3-202ENST00000562702 MYOZ2Q9NPC6 264 aa2.04□□□□□ -2.08
HDGFL3-202ENST00000562702 FANCFQ9NPI8 374 aa2.04□□□□□ -2.08
HDGFL3-202ENST00000562702 ANO10Q9NW15 660 aa2.04□□□□□ -2.08
HDGFL3-202ENST00000562702 TAS2R3Q9NYW6 316 aa2.04□□□□□ -2.08
HDGFL3-202ENST00000562702 IBTKQ9P2D0 1353 aaPredicted RBP2.04□□□□□ -2.08
HDGFL3-202ENST00000562702 CGNQ9P2M7 1197 aaKnown RBP2.04□□□□□ -2.08
HDGFL3-202ENST00000562702 SPRR3Q9UBC9 169 aa2.04□□□□□ -2.08
HDGFL3-202ENST00000562702 EXTL2Q9UBQ6 330 aa2.04□□□□□ -2.08
HDGFL3-202ENST00000562702 IL20RAQ9UHF4 553 aa2.04□□□□□ -2.08
HDGFL3-202ENST00000562702 ZNF221Q9UK13 617 aa2.04□□□□□ -2.08
HDGFL3-202ENST00000562702 AURKCQ9UQB9 309 aa2.04□□□□□ -2.08
HDGFL3-202ENST00000562702 PPIAL4AQ9Y536 164 aa2.04□□□□□ -2.08
HDGFL3-202ENST00000562702 GMPPBQ9Y5P6 360 aa2.04□□□□□ -2.08
HDGFL3-202ENST00000562702 CENPFP49454 3210 aa2.04□□□□□ -2.08
HDGFL3-202ENST00000562702 PLXNA1Q9UIW2 1896 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 DDX60LQ5H9U9 1706 aaKnown RBP2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 ZNF609O15014 1411 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 ATP8B3O60423 1300 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 CDHR2Q9BYE9 1310 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 IGHV7-81A0A0B4J1V7 117 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 SMIM28A0A1B0GU29 152 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 LRRIQ4A6NIV6 560 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 PANO1I0J062 215 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 K7ENP7 123 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 CASKO14936 926 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 CTAGE5O15320 804 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 SMPD2O60906 423 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 SCRG1O75711 98 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 IGKV5-2P06315 115 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 ANXA4P09525 319 aaPredicted RBP2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 GSTT2P0CG29 244 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 GSTT2BP0CG30 244 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 ZCCHC18P0CG32 403 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 PDHBP11177 359 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 VDAC1P21796 283 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 HOXD10P28358 340 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 ADORA2BP29275 332 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 NTSP30990 170 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 ASMTP46597 345 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 RPL29P47914 159 aaKnown RBP2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 GPC3P51654 580 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 STARD6P59095 220 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 OSTNP61366 133 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 TIMM10P62072 90 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 IRX3P78415 501 aaPredicted RBP2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 VLDLRP98155 873 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 ZNF154Q13106 437 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 TFDP1Q14186 410 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 PDIA5Q14554 519 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 PPP1R7Q15435 360 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 TPD52L1Q16890 204 aaPredicted RBP2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 LRRC36Q1X8D7 754 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 OR8G2PQ6IF36 304 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 OR6B2Q6IFH4 312 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 SLC39A4Q6P5W5 647 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 C16orf87Q6PH81 154 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 TMEM26Q6ZUK4 368 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 HSD11B1LQ7Z5J1 315 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 SERPINA9Q86WD7 417 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 ZNF100Q8IYN0 542 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 ALLCQ8N6M5 410 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 ZSCAN4Q8NAM6 433 aaPredicted RBP2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 ZNF540Q8NDQ6 660 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 OR9A1PQ8NGU1 263 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 IL1F10Q8WWZ1 152 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 ARNTL2Q8WYA1 636 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 PINX1Q96BK5 328 aaKnown RBP2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 TUBGCP3Q96CW5 907 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 HAVCR1Q96D42 359 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 NOL4LQ96MY1 436 aaPredicted RBP2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 GSDMAQ96QA5 445 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 PLIN2Q99541 437 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 FEM1AQ9BSK4 669 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 HES7Q9BYE0 225 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 COMMD4Q9H0A8 199 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 PRO3102Q9H379 93 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 NANOGQ9H9S0 305 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 LIN28AQ9H9Z2 209 aaKnown RBP2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 C1orf123Q9NWV4 160 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 MARCH5Q9NX47 278 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms