RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 CHP2O43745 196 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 RFPL3O75679 317 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 ATP1B1P05026 303 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 CYC1P08574 325 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 ZNF43P17038 809 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 GRK5P34947 590 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 RGS6P49758 472 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 CSRP3P50461 194 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 RAB40BQ12829 278 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 PGGHGQ32M88 737 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 FAM180AQ6UWF9 173 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 ZNF517Q6ZMY9 492 aaPredicted RBP6.99□□□□□ -1.29
TCF4-216ENST00000562680 QSOX2Q6ZRP7 698 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 PNLDC1Q8NA58 520 aaKnown RBP6.99□□□□□ -1.29
TCF4-216ENST00000562680 OR6N2Q8NGY6 317 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 SCARF2Q96GP6 870 aaPredicted RBP6.99□□□□□ -1.29
TCF4-216ENST00000562680 SAMD8Q96LT4 415 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 SDF2Q99470 211 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 MROQ9BYG7 248 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 SLC22A4Q9H015 551 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 NIT2Q9NQR4 276 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 MAB21L2Q9Y586 359 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 A0A1B0GVI7 797 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 ARRDC5A6NEK1 342 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 CLIC3O95833 236 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 PVALBP20472 110 aaPredicted RBP6.99□□□□□ -1.29
TCF4-216ENST00000562680 S1PR1P21453 382 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 FPR3P25089 353 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 PITPNAQ00169 270 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 TEKQ02763 1124 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 MESP2Q0VG99 397 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 CDK5R2Q13319 367 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 DUSP5Q16690 384 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 CALHM3Q86XJ0 350 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 OR5T3Q8NGG3 340 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 CNIH3Q8TBE1 160 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 NSMAFQ92636 917 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 SNAPC3Q92966 411 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 ELL3Q9HB65 397 aaPredicted RBP6.99□□□□□ -1.29
TCF4-216ENST00000562680 SDHAF2Q9NX18 166 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 LOXL2Q9Y4K0 774 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 HSPB11Q9Y547 144 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 C11orf98E9PRG8 122 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 J3QLW9 94 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 HMGN4O00479 90 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 SLC16A6O15403 523 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 KDM4BO94953 1096 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 LCKP06239 509 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 LINC00271P0C7V0 271 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 ZNF19P17023 458 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 GIPRP48546 466 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 CTBP2P56545 445 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 GLO1Q04760 184 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 ZNF181Q2M3W8 571 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 LRRC69Q6ZNQ3 347 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 MED25Q71SY5 747 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 OR5T1Q8NG75 326 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 AKR7LQ8NHP1 331 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 THEM6Q8WUY1 208 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 DIRAS2Q96HU8 199 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 MGLLQ99685 303 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 UTP23Q9BRU9 249 aaKnown RBP6.99□□□□□ -1.29
TCF4-216ENST00000562680 WACQ9BTA9 647 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 DPH1Q9BZG8 443 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 OR52D1Q9H346 318 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 NCOR1P1Q9H4R4 102 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 RNF121Q9H920 327 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 ATXN7L1Q9ULK2 861 aaPredicted RBP6.99□□□□□ -1.29
TCF4-216ENST00000562680 PPM1DO15297 605 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 XPNPEP2O43895 674 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 SNAPC5O75971 98 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 S100A8P05109 93 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 SDHBP21912 280 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 SSTR4P31391 388 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 CASP6P55212 293 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 GALK2Q01415 458 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 GAB4Q2WGN9 574 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 ADPRMQ3LIE5 342 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 PLK5Q496M5 336 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 PLET1Q6UQ28 207 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 FAM131AQ6UXB0 335 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 SHISA6Q6ZSJ9 500 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 HMGN2P46Q86SG4 172 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 RPS19BP1Q86WX3 136 aaKnown RBP6.99□□□□□ -1.29
TCF4-216ENST00000562680 PRR22Q8IZ63 422 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 TTC9Q92623 222 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 CNRIP1Q96F85 164 aaPredicted RBP6.99□□□□□ -1.29
TCF4-216ENST00000562680 FCRL1Q96LA6 429 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 TAAR9Q96RI9 348 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 SARGQ9BW04 601 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 GABARAPL1Q9H0R8 117 aa6.99□□□□□ -1.29
TCF4-216ENST00000562680 ARGFXA6NJG6 315 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 DPM1O60762 260 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 MITFO75030 526 aaPredicted RBP6.98□□□□□ -1.29
TCF4-216ENST00000562680 KHDRBS3O75525 346 aaKnown RBP6.98□□□□□ -1.29
TCF4-216ENST00000562680 MT-ATP6P00846 226 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 FUCA1P04066 466 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 TCN2P20062 427 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 ELK4P28324 431 aa6.98□□□□□ -1.29
TCF4-216ENST00000562680 MAP2K6P52564 334 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms