RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 CISHQ9NSE2 258 aa3.05□□□□□ -1.92
HERC1-215ENST00000561436 FAM49BQ9NUQ9 324 aa3.05□□□□□ -1.92
HERC1-215ENST00000561436 HPF1Q9NWY4 346 aa3.05□□□□□ -1.92
HERC1-215ENST00000561436 ZNF490Q9ULM2 529 aaPredicted RBP3.05□□□□□ -1.92
HERC1-215ENST00000561436 SLC6A5Q9Y345 797 aa3.05□□□□□ -1.92
HERC1-215ENST00000561436 OR51B4Q9Y5P0 310 aa3.05□□□□□ -1.92
HERC1-215ENST00000561436 ITPR3Q14573 2671 aa3.04□□□□□ -1.92
HERC1-215ENST00000561436 A0A0U1RRA0 63 aa3.04□□□□□ -1.92
HERC1-215ENST00000561436 A0A1W2PQ67 120 aa3.04□□□□□ -1.92
HERC1-215ENST00000561436 SH3PXD2BA1X283 911 aa3.04□□□□□ -1.92
HERC1-215ENST00000561436 HEATR9A2RTY3 570 aa3.04□□□□□ -1.92
HERC1-215ENST00000561436 ZSCAN5CA6NGD5 496 aaPredicted RBP3.04□□□□□ -1.92
HERC1-215ENST00000561436 D6RAR5 112 aa3.04□□□□□ -1.92
HERC1-215ENST00000561436 SLC31A1O15431 190 aa3.04□□□□□ -1.92
HERC1-215ENST00000561436 TXNL1O43396 289 aa3.04□□□□□ -1.92
HERC1-215ENST00000561436 MED7O43513 233 aa3.04□□□□□ -1.92
HERC1-215ENST00000561436 SNAP91O60641 907 aa3.04□□□□□ -1.92
HERC1-215ENST00000561436 KLHL41O60662 606 aa3.04□□□□□ -1.92
HERC1-215ENST00000561436 SDC3O75056 442 aa3.04□□□□□ -1.92
HERC1-215ENST00000561436 OR6B1O95007 311 aa3.04□□□□□ -1.92
HERC1-215ENST00000561436 TGFAP01135 160 aa3.04□□□□□ -1.92
HERC1-215ENST00000561436 IGLV3-25P01717 112 aa3.04□□□□□ -1.92
HERC1-215ENST00000561436 OR9G9P0C7N8 305 aa3.04□□□□□ -1.92
HERC1-215ENST00000561436 ADRB3P13945 408 aa3.04□□□□□ -1.92
HERC1-215ENST00000561436 HSD17B1P14061 328 aa3.04□□□□□ -1.92
HERC1-215ENST00000561436 GP9P14770 177 aa3.04□□□□□ -1.92
HERC1-215ENST00000561436 PPP1R2P41236 205 aa3.04□□□□□ -1.92
HERC1-215ENST00000561436 SLC6A8P48029 635 aa3.04□□□□□ -1.92
HERC1-215ENST00000561436 NPY2RP49146 381 aa3.04□□□□□ -1.92
HERC1-215ENST00000561436 VEGFCP49767 419 aa3.04□□□□□ -1.92
HERC1-215ENST00000561436 NDUFV3P56181 108 aaKnown RBP3.04□□□□□ -1.92
HERC1-215ENST00000561436 RAD51Q06609 339 aa3.04□□□□□ -1.92
HERC1-215ENST00000561436 CUL2Q13617 745 aa3.04□□□□□ -1.92
HERC1-215ENST00000561436 CDKN3Q16667 212 aa3.04□□□□□ -1.92
HERC1-215ENST00000561436 HKDC1Q2TB90 917 aa3.04□□□□□ -1.92
HERC1-215ENST00000561436 BRMS1LQ5PSV4 323 aa3.04□□□□□ -1.92
HERC1-215ENST00000561436 C1orf220Q5T0J3 134 aa3.04□□□□□ -1.92
HERC1-215ENST00000561436 RAET1GQ6H3X3 334 aa3.04□□□□□ -1.92
HERC1-215ENST00000561436 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.04□□□□□ -1.92
HERC1-215ENST00000561436 GUSBP11Q6P575 273 aa3.04□□□□□ -1.92
HERC1-215ENST00000561436 LRRC31Q6UY01 552 aa3.04□□□□□ -1.92
HERC1-215ENST00000561436 ARCQ7LC44 396 aa3.04□□□□□ -1.92
HERC1-215ENST00000561436 NUFIP2Q7Z417 695 aaKnown RBP3.04□□□□□ -1.92
HERC1-215ENST00000561436 NELFCDQ8IXH7 590 aa3.04□□□□□ -1.92
HERC1-215ENST00000561436 OR56B1Q8NGI3 324 aa3.04□□□□□ -1.92
HERC1-215ENST00000561436 OR2A12Q8NGT7 310 aa3.04□□□□□ -1.92
HERC1-215ENST00000561436 MIPOL1Q8TD10 442 aa3.04□□□□□ -1.92
HERC1-215ENST00000561436 CHPT1Q8WUD6 406 aa3.04□□□□□ -1.92
HERC1-215ENST00000561436 KIAA1143Q96AT1 154 aaPredicted RBP3.04□□□□□ -1.92
HERC1-215ENST00000561436 PINX1Q96BK5 328 aaKnown RBP3.04□□□□□ -1.92
HERC1-215ENST00000561436 SAMD8Q96LT4 415 aa3.04□□□□□ -1.92
HERC1-215ENST00000561436 ZNF597Q96LX8 424 aa3.04□□□□□ -1.92
HERC1-215ENST00000561436 KLF6Q99612 283 aaPredicted RBP3.04□□□□□ -1.92
HERC1-215ENST00000561436 RBM4BQ9BQ04 359 aaKnown RBP3.04□□□□□ -1.92
HERC1-215ENST00000561436 CALN1Q9BXU9 219 aa3.04□□□□□ -1.92
HERC1-215ENST00000561436 NMNAT2Q9BZQ4 307 aa3.04□□□□□ -1.92
HERC1-215ENST00000561436 HSD3B7Q9H2F3 369 aa3.04□□□□□ -1.92
HERC1-215ENST00000561436 NT5DC2Q9H857 520 aa3.04□□□□□ -1.92
HERC1-215ENST00000561436 NINJ2Q9NZG7 142 aa3.04□□□□□ -1.92
HERC1-215ENST00000561436 ACTR3BQ9P1U1 418 aa3.04□□□□□ -1.92
HERC1-215ENST00000561436 LHX3Q9UBR4 397 aa3.04□□□□□ -1.92
HERC1-215ENST00000561436 HMGXB4Q9UGU5 601 aa3.04□□□□□ -1.92
HERC1-215ENST00000561436 APOBEC3BQ9UH17 382 aaKnown RBP3.04□□□□□ -1.92
HERC1-215ENST00000561436 ASIC3Q9UHC3 531 aa3.04□□□□□ -1.92
HERC1-215ENST00000561436 CFAP45Q9UL16 551 aa3.04□□□□□ -1.92
HERC1-215ENST00000561436 PLEKHA6Q9Y2H5 1048 aa3.04□□□□□ -1.92
HERC1-215ENST00000561436 FADS3Q9Y5Q0 445 aa3.04□□□□□ -1.92
HERC1-215ENST00000561436 F5P12259 2224 aa3.04□□□□□ -1.92
HERC1-215ENST00000561436 ABCA12Q86UK0 2595 aa3.04□□□□□ -1.92
HERC1-215ENST00000561436 BPTFQ12830 3046 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 MYH7BA7E2Y1 1941 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 IGLV3-10A0A075B6K4 115 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 NPIPA5A0A0B4J1W7 369 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 A0A1W2PNU3 283 aaPredicted RBP3.03□□□□□ -1.92
HERC1-215ENST00000561436 TMEM89A2RUT3 159 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 VPS37CA5D8V6 355 aaPredicted RBP3.03□□□□□ -1.92
HERC1-215ENST00000561436 ZNF724A8MTY0 619 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 NPIPA5E9PKD4 350 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 MKRN2OSH3BPM6 223 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 EI24O14681 340 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 CETN3O15182 167 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 TOX3O15405 576 aaPredicted RBP3.03□□□□□ -1.92
HERC1-215ENST00000561436 SORBS2O94875 1100 aaKnown RBP3.03□□□□□ -1.92
HERC1-215ENST00000561436 NUDT14O95848 222 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 TNFP01375 233 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 FCGR3AP08637 254 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 EPB41P11171 864 aaKnown RBP3.03□□□□□ -1.92
HERC1-215ENST00000561436 CTSEP14091 401 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 CCNA2P20248 432 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 TEAD1P28347 426 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 MAT2AP31153 395 aaKnown RBP3.03□□□□□ -1.92
HERC1-215ENST00000561436 MTIF2P46199 727 aaKnown RBP3.03□□□□□ -1.92
HERC1-215ENST00000561436 GCLMP48507 274 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 CASP4P49662 377 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 SGSHP51688 502 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 CLDN6P56747 220 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 RPS4XP62701 263 aaKnown RBP3.03□□□□□ -1.92
HERC1-215ENST00000561436 RPS24P62847 133 aaKnown RBP3.03□□□□□ -1.92
HERC1-215ENST00000561436 ACY1Q03154 408 aa3.03□□□□□ -1.92
HERC1-215ENST00000561436 ELP6Q0PNE2 266 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms