RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 C1QL3Q5VWW1 255 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 OR2T5Q6IEZ7 315 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 BORAQ6PGQ7 559 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 GDF7Q7Z4P5 450 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.72□□□□□ -1.65
SPG11-220ENST00000559933 YRDCQ86U90 279 aaKnown RBP4.72□□□□□ -1.65
SPG11-220ENST00000559933 APLFQ8IW19 511 aaPredicted RBP4.72□□□□□ -1.65
SPG11-220ENST00000559933 C10orf67Q8IYJ2 551 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 PQLC1Q8N2U9 271 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 RBMXL3Q8N7X1 1067 aaKnown RBP4.72□□□□□ -1.65
SPG11-220ENST00000559933 FADS6Q8N9I5 356 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 PAPD5Q8NDF8 572 aaKnown RBP4.72□□□□□ -1.65
SPG11-220ENST00000559933 ATP6V1C2Q8NEY4 427 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 OR2M7Q8NG81 312 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 OR2M3Q8NG83 312 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 OR4K17Q8NGC6 315 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 OR4C15Q8NGM1 316 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 OR2T29Q8NH02 315 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 ZNF563Q8TA94 476 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 POC1BQ8TC44 478 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 GPR119Q8TDV5 335 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 ADAMTS16Q8TE57 1224 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 C3orf49Q96BT1 292 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 DUS3LQ96G46 650 aaKnown RBP4.72□□□□□ -1.65
SPG11-220ENST00000559933 PRRC1Q96M27 445 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 PIP5K1AQ99755 562 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 GPA33Q99795 319 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 CIB1Q99828 191 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 ANGPTL4Q9BY76 406 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 LAT2Q9GZY6 243 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 MAGIXQ9H6Y5 334 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 SMURF2Q9HAU4 748 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 AGPAT4Q9NRZ5 378 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 SACM1LQ9NTJ5 587 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 C20orf141Q9NUB4 165 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 MED17Q9NVC6 651 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 ARMC1Q9NVT9 282 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 TAS2R10Q9NYW0 307 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 ABI3Q9P2A4 366 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 TEKT2Q9UIF3 430 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 DKKL1Q9UK85 242 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 SLC13A4Q9UKG4 626 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 OAZ3Q9UMX2 235 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 SLC35A3Q9Y2D2 325 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 SLC9A8Q9Y2E8 581 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 SF3B6Q9Y3B4 125 aaKnown RBP4.72□□□□□ -1.65
SPG11-220ENST00000559933 LYVE1Q9Y5Y7 322 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 ENPP4Q9Y6X5 453 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 PIEZO2Q9H5I5 2752 aa4.72□□□□□ -1.65
SPG11-220ENST00000559933 ACACBO00763 2458 aa4.71□□□□□ -1.65
SPG11-220ENST00000559933 CNTRLQ7Z7A1 2325 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 A0A0B4J2E0 115 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 A0A1B0GX12 115 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 TMEM72A0PK05 275 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 ANKUB1A6NFN9 424 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 NOTOA8MTQ0 251 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 H0YC42 278 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 H3BML4 177 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 H3BNH8 94 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 TNFRSF11BO00300 401 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 GNGT2O14610 69 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 EI24O14681 340 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 EFNA2O43921 213 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 EIF4E2O60573 245 aaKnown RBP4.71□□□□□ -1.66
SPG11-220ENST00000559933 E2F6O75461 281 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 LDLRP01130 860 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 TP53P04637 393 aaPredicted RBP4.71□□□□□ -1.66
SPG11-220ENST00000559933 IGFBP1P08833 259 aaPredicted RBP4.71□□□□□ -1.66
SPG11-220ENST00000559933 LINGO3P0C6S8 592 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 UMPSP11172 480 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 POU2F1P14859 743 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 ZNF23P17027 643 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 HK1P19367 917 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 MAKP20794 623 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 CNR1P21554 472 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 FASP25445 335 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 ELAVL4P26378 380 aaKnown RBP4.71□□□□□ -1.66
SPG11-220ENST00000559933 TACR3P29371 465 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 LCN1P31025 176 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 MAGEA5P43359 124 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 GPR4P46093 362 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 LIMS1P48059 325 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 GSSP48637 474 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 TNFSF10P50591 281 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 TPD52P55327 224 aaPredicted RBP4.71□□□□□ -1.66
SPG11-220ENST00000559933 SOX8P57073 446 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 HSF1Q00613 529 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 PLGLB1Q02325 96 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 SLC34A1Q06495 639 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 DBPQ10586 325 aaPredicted RBP4.71□□□□□ -1.66
SPG11-220ENST00000559933 MERTKQ12866 999 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 LY6DQ14210 128 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 TOMM20Q15388 145 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 C3AR1Q16581 482 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 PLPPR5Q32ZL2 321 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 DCST1Q5T197 706 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 OTUD3Q5T2D3 398 aaPredicted RBP4.71□□□□□ -1.66
SPG11-220ENST00000559933 RAET1LQ5VY80 246 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 AP1ARQ63HQ0 302 aa4.71□□□□□ -1.66
SPG11-220ENST00000559933 SLC22A10Q63ZE4 541 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms