RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 COPZ1P61923 177 aa13.19□□□□□ -0.3
RABGGTA-211ENST00000559850 CSNK2A1P68400 391 aaPredicted RBP13.19□□□□□ -0.3
RABGGTA-211ENST00000559850 DAZAP2Q15038 168 aaPredicted RBP13.19□□□□□ -0.3
RABGGTA-211ENST00000559850 RABL3Q5HYI8 236 aa13.19□□□□□ -0.3
RABGGTA-211ENST00000559850 WBP2NLQ6ICG8 309 aa13.19□□□□□ -0.3
RABGGTA-211ENST00000559850 TFAP2EQ6VUC0 442 aa13.19□□□□□ -0.3
RABGGTA-211ENST00000559850 CDC20BQ86Y33 519 aa13.19□□□□□ -0.3
RABGGTA-211ENST00000559850 POU5F2Q8N7G0 328 aa13.19□□□□□ -0.3
RABGGTA-211ENST00000559850 SMYD1Q8NB12 490 aa13.19□□□□□ -0.3
RABGGTA-211ENST00000559850 HIPK4Q8NE63 616 aa13.19□□□□□ -0.3
RABGGTA-211ENST00000559850 OR10A6Q8NH74 314 aa13.19□□□□□ -0.3
RABGGTA-211ENST00000559850 TSPEARQ8WU66 669 aa13.19□□□□□ -0.3
RABGGTA-211ENST00000559850 C3orf49Q96BT1 292 aa13.19□□□□□ -0.3
RABGGTA-211ENST00000559850 DDIT4LQ96D03 193 aa13.19□□□□□ -0.3
RABGGTA-211ENST00000559850 TMEM38AQ9H6F2 299 aa13.19□□□□□ -0.3
RABGGTA-211ENST00000559850 TMEM181Q9P2C4 612 aa13.19□□□□□ -0.3
RABGGTA-211ENST00000559850 HDGFL3Q9Y3E1 203 aa13.19□□□□□ -0.3
RABGGTA-211ENST00000559850 ANKRD17O75179 2603 aaKnown RBP13.19□□□□□ -0.3
RABGGTA-211ENST00000559850 FAM221AA4D161 298 aa13.18□□□□□ -0.3
RABGGTA-211ENST00000559850 FXYD1O00168 92 aa13.18□□□□□ -0.3
RABGGTA-211ENST00000559850 SIAH2O43255 324 aa13.18□□□□□ -0.3
RABGGTA-211ENST00000559850 PMS2P2O95744 297 aa13.18□□□□□ -0.3
RABGGTA-211ENST00000559850 PTNP21246 168 aa13.18□□□□□ -0.3
RABGGTA-211ENST00000559850 FPR1P21462 350 aa13.18□□□□□ -0.3
RABGGTA-211ENST00000559850 HTR2AP28223 471 aa13.18□□□□□ -0.3
RABGGTA-211ENST00000559850 PRKAR1BP31321 381 aa13.18□□□□□ -0.3
RABGGTA-211ENST00000559850 DMTNQ08495 405 aa13.18□□□□□ -0.3
RABGGTA-211ENST00000559850 TRMT5Q32P41 509 aaKnown RBP13.18□□□□□ -0.3
RABGGTA-211ENST00000559850 MMEL1Q495T6 779 aa13.18□□□□□ -0.3
RABGGTA-211ENST00000559850 ABLIM2Q6H8Q1 611 aa13.18□□□□□ -0.3
RABGGTA-211ENST00000559850 NANOGP8Q6NSW7 305 aa13.18□□□□□ -0.3
RABGGTA-211ENST00000559850 STAC2Q6ZMT1 411 aa13.18□□□□□ -0.3
RABGGTA-211ENST00000559850 MTDHQ86UE4 582 aaKnown RBP13.18□□□□□ -0.3
RABGGTA-211ENST00000559850 CXorf67Q86X51 503 aaPredicted RBP13.18□□□□□ -0.3
RABGGTA-211ENST00000559850 KRT73Q86Y46 540 aa13.18□□□□□ -0.3
RABGGTA-211ENST00000559850 SLC43A2Q8N370 569 aa13.18□□□□□ -0.3
RABGGTA-211ENST00000559850 DACH2Q96NX9 599 aa13.18□□□□□ -0.3
RABGGTA-211ENST00000559850 MED18Q9BUE0 208 aa13.18□□□□□ -0.3
RABGGTA-211ENST00000559850 FAM107BQ9H098 131 aa13.18□□□□□ -0.3
RABGGTA-211ENST00000559850 ARMC7Q9H6L4 198 aa13.18□□□□□ -0.3
RABGGTA-211ENST00000559850 KAT8Q9H7Z6 458 aaKnown RBP13.18□□□□□ -0.3
RABGGTA-211ENST00000559850 NANOGQ9H9S0 305 aa13.18□□□□□ -0.3
RABGGTA-211ENST00000559850 BCO1Q9HAY6 547 aa13.18□□□□□ -0.3
RABGGTA-211ENST00000559850 KLHL9Q9P2J3 617 aa13.18□□□□□ -0.3
RABGGTA-211ENST00000559850 NDRG3Q9UGV2 375 aa13.18□□□□□ -0.3
RABGGTA-211ENST00000559850 ANGPT4Q9Y264 503 aa13.18□□□□□ -0.3
RABGGTA-211ENST00000559850 CAPN7Q9Y6W3 813 aa13.18□□□□□ -0.3
RABGGTA-211ENST00000559850 A0A1W2PPR1 153 aa13.17□□□□□ -0.3
RABGGTA-211ENST00000559850 ZNF716A6NP11 495 aa13.17□□□□□ -0.3
RABGGTA-211ENST00000559850 CASKO14936 926 aa13.17□□□□□ -0.3
RABGGTA-211ENST00000559850 ZNF208O43345 1280 aa13.17□□□□□ -0.3
RABGGTA-211ENST00000559850 IGHV3-9P01782 118 aa13.17□□□□□ -0.3
RABGGTA-211ENST00000559850 THBDP07204 575 aa13.17□□□□□ -0.3
RABGGTA-211ENST00000559850 IDUAP35475 653 aa13.17□□□□□ -0.3
RABGGTA-211ENST00000559850 GZMMP51124 257 aa13.17□□□□□ -0.3
RABGGTA-211ENST00000559850 PCBP3P57721 371 aaKnown RBP13.17□□□□□ -0.3
RABGGTA-211ENST00000559850 CEACAM7Q14002 265 aa13.17□□□□□ -0.3
RABGGTA-211ENST00000559850 OR7A5Q15622 319 aa13.17□□□□□ -0.3
RABGGTA-211ENST00000559850 ZSWIM7Q19AV6 140 aa13.17□□□□□ -0.3
RABGGTA-211ENST00000559850 ALKBH2Q6NS38 261 aa13.17□□□□□ -0.3
RABGGTA-211ENST00000559850 DHRS4L2Q6PKH6 230 aa13.17□□□□□ -0.3
RABGGTA-211ENST00000559850 ATG4DQ86TL0 474 aaPredicted RBP13.17□□□□□ -0.3
RABGGTA-211ENST00000559850 STK32CQ86UX6 486 aa13.17□□□□□ -0.3
RABGGTA-211ENST00000559850 ARMC8Q8IUR7 673 aa13.17□□□□□ -0.3
RABGGTA-211ENST00000559850 P3H2Q8IVL5 708 aa13.17□□□□□ -0.3
RABGGTA-211ENST00000559850 C11orf65Q8NCR3 313 aa13.17□□□□□ -0.3
RABGGTA-211ENST00000559850 LRRC58Q96CX6 371 aa13.17□□□□□ -0.3
RABGGTA-211ENST00000559850 RCN3Q96D15 328 aa13.17□□□□□ -0.3
RABGGTA-211ENST00000559850 ZHX1-C8orf76Q96EF9 292 aa13.17□□□□□ -0.3
RABGGTA-211ENST00000559850 ELAC2Q9BQ52 826 aaKnown RBP13.17□□□□□ -0.3
RABGGTA-211ENST00000559850 SPATA5L1Q9BVQ7 753 aa13.17□□□□□ -0.3
RABGGTA-211ENST00000559850 M0QX08 132 aa13.16□□□□□ -0.3
RABGGTA-211ENST00000559850 M0R3H8 397 aa13.16□□□□□ -0.3
RABGGTA-211ENST00000559850 MFN2O95140 757 aa13.16□□□□□ -0.3
RABGGTA-211ENST00000559850 AKR7A3O95154 331 aa13.16□□□□□ -0.3
RABGGTA-211ENST00000559850 ADAP00813 363 aa13.16□□□□□ -0.3
RABGGTA-211ENST00000559850 HRGP04196 525 aa13.16□□□□□ -0.3
RABGGTA-211ENST00000559850 ADSLP30566 484 aaPredicted RBP13.16□□□□□ -0.3
RABGGTA-211ENST00000559850 DNAJA1P31689 397 aaKnown RBP13.16□□□□□ -0.3
RABGGTA-211ENST00000559850 NTF4P34130 210 aa13.16□□□□□ -0.3
RABGGTA-211ENST00000559850 CLK1P49759 484 aaKnown RBP13.16□□□□□ -0.3
RABGGTA-211ENST00000559850 RGS8P57771 180 aaPredicted RBP13.16□□□□□ -0.3
RABGGTA-211ENST00000559850 SLC35A1P78382 337 aa13.16□□□□□ -0.3
RABGGTA-211ENST00000559850 CYLC2Q14093 348 aaPredicted RBP13.16□□□□□ -0.3
RABGGTA-211ENST00000559850 BEND4Q6ZU67 534 aa13.16□□□□□ -0.3
RABGGTA-211ENST00000559850 NET1Q7Z628 596 aaPredicted RBP13.16□□□□□ -0.3
RABGGTA-211ENST00000559850 GABRG1Q8N1C3 465 aa13.16□□□□□ -0.3
RABGGTA-211ENST00000559850 TMEM99Q8N816 258 aa13.16□□□□□ -0.3
RABGGTA-211ENST00000559850 GPR32P1Q8NGA4 272 aa13.16□□□□□ -0.3
RABGGTA-211ENST00000559850 OR52E4Q8NGH9 312 aa13.16□□□□□ -0.3
RABGGTA-211ENST00000559850 RNF217Q8TC41 542 aa13.16□□□□□ -0.3
RABGGTA-211ENST00000559850 PIK3IP1Q96FE7 263 aa13.16□□□□□ -0.3
RABGGTA-211ENST00000559850 ZNF607Q96SK3 696 aa13.16□□□□□ -0.3
RABGGTA-211ENST00000559850 ACTR6Q9GZN1 396 aa13.16□□□□□ -0.3
RABGGTA-211ENST00000559850 GP6Q9HCN6 339 aa13.16□□□□□ -0.3
RABGGTA-211ENST00000559850 ADPRHL2Q9NX46 363 aa13.16□□□□□ -0.3
RABGGTA-211ENST00000559850 GMPR2Q9P2T1 348 aaKnown RBP13.16□□□□□ -0.3
RABGGTA-211ENST00000559850 RPS6KB2Q9UBS0 482 aa13.16□□□□□ -0.3
RABGGTA-211ENST00000559850 A0A1B0GWA3 101 aa13.15□□□□□ -0.3
RABGGTA-211ENST00000559850 LIPT2A6NK58 231 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms