RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 RNF122Q9H9V4 155 aa18.16■□□□□ 0.5
TSPAN3-207ENST00000559494 TMEM27Q9HBJ8 222 aa18.16■□□□□ 0.5
TSPAN3-207ENST00000559494 TIGARQ9NQ88 270 aa18.16■□□□□ 0.5
TSPAN3-207ENST00000559494 MCTS1Q9ULC4 181 aaKnown RBP18.16■□□□□ 0.5
TSPAN3-207ENST00000559494 HDGFL3Q9Y3E1 203 aa18.16■□□□□ 0.5
TSPAN3-207ENST00000559494 HECTD1Q9ULT8 2610 aa18.15■□□□□ 0.5
TSPAN3-207ENST00000559494 FMO6PO60774 539 aa18.15■□□□□ 0.5
TSPAN3-207ENST00000559494 TCN1P20061 433 aaPredicted RBP18.15■□□□□ 0.5
TSPAN3-207ENST00000559494 KLK2P20151 261 aa18.15■□□□□ 0.5
TSPAN3-207ENST00000559494 DIO1P49895 249 aa18.15■□□□□ 0.5
TSPAN3-207ENST00000559494 NCALDP61601 193 aa18.15■□□□□ 0.5
TSPAN3-207ENST00000559494 CEACAM7Q14002 265 aa18.15■□□□□ 0.5
TSPAN3-207ENST00000559494 FXNQ16595 210 aa18.15■□□□□ 0.5
TSPAN3-207ENST00000559494 ZNF239Q16600 458 aaKnown RBP18.15■□□□□ 0.5
TSPAN3-207ENST00000559494 GLYATQ6IB77 296 aa18.15■□□□□ 0.5
TSPAN3-207ENST00000559494 C6orf89Q6UWU4 347 aa18.15■□□□□ 0.5
TSPAN3-207ENST00000559494 CBLL1Q75N03 491 aa18.15■□□□□ 0.5
TSPAN3-207ENST00000559494 RANBP3LQ86VV4 465 aaPredicted RBP18.15■□□□□ 0.5
TSPAN3-207ENST00000559494 TSPYL5Q86VY4 417 aaPredicted RBP18.15■□□□□ 0.5
TSPAN3-207ENST00000559494 CARM1Q86X55 608 aa18.15■□□□□ 0.5
TSPAN3-207ENST00000559494 DNAJA4Q8WW22 397 aaPredicted RBP18.15■□□□□ 0.5
TSPAN3-207ENST00000559494 CPNE4Q96A23 557 aaPredicted RBP18.15■□□□□ 0.5
TSPAN3-207ENST00000559494 DDIT4LQ96D03 193 aa18.15■□□□□ 0.5
TSPAN3-207ENST00000559494 TPD52L3Q96J77 140 aa18.15■□□□□ 0.5
TSPAN3-207ENST00000559494 ZFP3Q96NJ6 502 aa18.15■□□□□ 0.5
TSPAN3-207ENST00000559494 POTEKPQ9BYX7 375 aa18.15■□□□□ 0.5
TSPAN3-207ENST00000559494 TAS2R1Q9NYW7 299 aa18.15■□□□□ 0.5
TSPAN3-207ENST00000559494 ZNF629Q9UEG4 869 aaPredicted RBP18.15■□□□□ 0.5
TSPAN3-207ENST00000559494 A0A0B4J2E0 115 aa18.14■□□□□ 0.49
TSPAN3-207ENST00000559494 A0A1B0GX12 115 aa18.14■□□□□ 0.49
TSPAN3-207ENST00000559494 SULT2B1O00204 365 aa18.14■□□□□ 0.49
TSPAN3-207ENST00000559494 IMPDH2P12268 514 aa18.14■□□□□ 0.49
TSPAN3-207ENST00000559494 ENPP1P22413 925 aa18.14■□□□□ 0.49
TSPAN3-207ENST00000559494 OR1E2P47887 323 aa18.14■□□□□ 0.49
TSPAN3-207ENST00000559494 ALG10BQ5I7T1 473 aa18.14■□□□□ 0.49
TSPAN3-207ENST00000559494 ENTPD8Q5MY95 495 aa18.14■□□□□ 0.49
TSPAN3-207ENST00000559494 OR2A2Q6IF42 318 aa18.14■□□□□ 0.49
TSPAN3-207ENST00000559494 ULK3Q6PHR2 472 aa18.14■□□□□ 0.49
TSPAN3-207ENST00000559494 SLC38A4Q969I6 547 aa18.14■□□□□ 0.49
TSPAN3-207ENST00000559494 C12orf10Q9HB07 376 aa18.14■□□□□ 0.49
TSPAN3-207ENST00000559494 TRAPPC4Q9Y296 219 aa18.14■□□□□ 0.49
TSPAN3-207ENST00000559494 SLC9A8Q9Y2E8 581 aa18.14■□□□□ 0.49
TSPAN3-207ENST00000559494 ADGRG4Q8IZF6 3080 aa18.13■□□□□ 0.49
TSPAN3-207ENST00000559494 FLNBO75369 2602 aaKnown RBP18.13■□□□□ 0.49
TSPAN3-207ENST00000559494 IGHV3-15A0A0B4J1V0 119 aa18.13■□□□□ 0.49
TSPAN3-207ENST00000559494 NKX2-6A6NCS4 301 aa18.13■□□□□ 0.49
TSPAN3-207ENST00000559494 CPSF4LA6NMK7 179 aaKnown RBP18.13■□□□□ 0.49
TSPAN3-207ENST00000559494 FAM90A27PA6NNH2 459 aa18.13■□□□□ 0.49
TSPAN3-207ENST00000559494 A8MVM7 634 aa18.13■□□□□ 0.49
TSPAN3-207ENST00000559494 NPIPB7O75200 414 aa18.13■□□□□ 0.49
TSPAN3-207ENST00000559494 TNFSF13O75888 250 aa18.13■□□□□ 0.49
TSPAN3-207ENST00000559494 LYPD3O95274 346 aa18.13■□□□□ 0.49
TSPAN3-207ENST00000559494 PMS2P2O95744 297 aa18.13■□□□□ 0.49
TSPAN3-207ENST00000559494 IL18BPO95998 194 aa18.13■□□□□ 0.49
TSPAN3-207ENST00000559494 SERPINA1P01009 418 aa18.13■□□□□ 0.49
TSPAN3-207ENST00000559494 THY1P04216 161 aa18.13■□□□□ 0.49
TSPAN3-207ENST00000559494 BMP5P22003 454 aa18.13■□□□□ 0.49
TSPAN3-207ENST00000559494 KIR2DL2P43627 348 aaPredicted RBP18.13■□□□□ 0.49
TSPAN3-207ENST00000559494 CDH12P55289 794 aa18.13■□□□□ 0.49
TSPAN3-207ENST00000559494 EGR4Q05215 589 aa18.13■□□□□ 0.49
TSPAN3-207ENST00000559494 GUSBP1Q15486 140 aa18.13■□□□□ 0.49
TSPAN3-207ENST00000559494 MAMDC2Q7Z304 686 aaPredicted RBP18.13■□□□□ 0.49
TSPAN3-207ENST00000559494 VTCN1Q7Z7D3 282 aa18.13■□□□□ 0.49
TSPAN3-207ENST00000559494 RELL2Q8NC24 303 aaPredicted RBP18.13■□□□□ 0.49
TSPAN3-207ENST00000559494 FAM162AQ96A26 154 aa18.13■□□□□ 0.49
TSPAN3-207ENST00000559494 SLC47A1Q96FL8 570 aa18.13■□□□□ 0.49
TSPAN3-207ENST00000559494 PCDHAC1Q9H158 963 aa18.13■□□□□ 0.49
TSPAN3-207ENST00000559494 C1orf21Q9H246 121 aa18.13■□□□□ 0.49
TSPAN3-207ENST00000559494 ADPRHL2Q9NX46 363 aa18.13■□□□□ 0.49
TSPAN3-207ENST00000559494 A0A1W2PNV4 684 aa18.12■□□□□ 0.49
TSPAN3-207ENST00000559494 ELOA3DA6NLF2 546 aaPredicted RBP18.12■□□□□ 0.49
TSPAN3-207ENST00000559494 DVL2O14641 736 aa18.12■□□□□ 0.49
TSPAN3-207ENST00000559494 SMAD9O15198 467 aaKnown RBP18.12■□□□□ 0.49
TSPAN3-207ENST00000559494 ZNF682O95780 498 aa18.12■□□□□ 0.49
TSPAN3-207ENST00000559494 CRHP06850 196 aa18.12■□□□□ 0.49
TSPAN3-207ENST00000559494 FCGR2AP12318 317 aa18.12■□□□□ 0.49
TSPAN3-207ENST00000559494 GRNP28799 593 aaKnown RBP18.12■□□□□ 0.49
TSPAN3-207ENST00000559494 OPRM1P35372 400 aa18.12■□□□□ 0.49
TSPAN3-207ENST00000559494 OR2B6P58173 313 aa18.12■□□□□ 0.49
TSPAN3-207ENST00000559494 CSNK2A1P68400 391 aaPredicted RBP18.12■□□□□ 0.49
TSPAN3-207ENST00000559494 ELOA3BQ3SY89 546 aa18.12■□□□□ 0.49
TSPAN3-207ENST00000559494 SPATS1Q496A3 300 aa18.12■□□□□ 0.49
TSPAN3-207ENST00000559494 ZNF613Q6PF04 617 aa18.12■□□□□ 0.49
TSPAN3-207ENST00000559494 FCRLAQ7L513 359 aa18.12■□□□□ 0.49
TSPAN3-207ENST00000559494 ELOA3Q8NG57 546 aa18.12■□□□□ 0.49
TSPAN3-207ENST00000559494 STK35Q8TDR2 534 aa18.12■□□□□ 0.49
TSPAN3-207ENST00000559494 RNF128Q8TEB7 428 aa18.12■□□□□ 0.49
TSPAN3-207ENST00000559494 LZICQ8WZA0 190 aa18.12■□□□□ 0.49
TSPAN3-207ENST00000559494 GORASP2Q9H8Y8 452 aa18.12■□□□□ 0.49
TSPAN3-207ENST00000559494 KCNJ16Q9NPI9 418 aa18.12■□□□□ 0.49
TSPAN3-207ENST00000559494 CLEC4AQ9UMR7 237 aa18.12■□□□□ 0.49
TSPAN3-207ENST00000559494 KLF2Q9Y5W3 355 aaPredicted RBP18.12■□□□□ 0.49
TSPAN3-207ENST00000559494 IGKV1D-42A0A075B6H8 117 aa18.11■□□□□ 0.49
TSPAN3-207ENST00000559494 A0A087WUJ7 227 aa18.11■□□□□ 0.49
TSPAN3-207ENST00000559494 PNMTP11086 282 aa18.11■□□□□ 0.49
TSPAN3-207ENST00000559494 FPR1P21462 350 aa18.11■□□□□ 0.49
TSPAN3-207ENST00000559494 SLC25A35Q3KQZ1 300 aa18.11■□□□□ 0.49
TSPAN3-207ENST00000559494 C1orf140Q5VVS0 124 aa18.11■□□□□ 0.49
TSPAN3-207ENST00000559494 LINC00114Q6XXX2 140 aa18.11■□□□□ 0.49
TSPAN3-207ENST00000559494 RNF217Q8TC41 542 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms