RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 E9PBE3 544 aa2.07□□□□□ -2.08
VPS13C-207ENST00000558919 CA1P00915 261 aaPredicted RBP2.07□□□□□ -2.08
VPS13C-207ENST00000558919 RBMY1CP0DJD4 496 aa2.07□□□□□ -2.08
VPS13C-207ENST00000558919 ANXA13P27216 316 aa2.07□□□□□ -2.08
VPS13C-207ENST00000558919 HOXA9P31269 272 aa2.07□□□□□ -2.08
VPS13C-207ENST00000558919 FGF9P31371 208 aaPredicted RBP2.07□□□□□ -2.08
VPS13C-207ENST00000558919 ZNF136P52737 540 aa2.07□□□□□ -2.08
VPS13C-207ENST00000558919 GMFBP60983 142 aa2.07□□□□□ -2.08
VPS13C-207ENST00000558919 TMIGD1Q6UXZ0 262 aa2.07□□□□□ -2.08
VPS13C-207ENST00000558919 C6orf223Q8N319 242 aa2.07□□□□□ -2.08
VPS13C-207ENST00000558919 DHRSXQ8N5I4 330 aa2.07□□□□□ -2.08
VPS13C-207ENST00000558919 DENND6BQ8NEG7 585 aa2.07□□□□□ -2.08
VPS13C-207ENST00000558919 NPBQ8NG41 125 aa2.07□□□□□ -2.08
VPS13C-207ENST00000558919 OR10G3Q8NGC4 313 aa2.07□□□□□ -2.08
VPS13C-207ENST00000558919 OR6C4Q8NGE1 309 aa2.07□□□□□ -2.08
VPS13C-207ENST00000558919 OR5L2Q8NGL0 311 aa2.07□□□□□ -2.08
VPS13C-207ENST00000558919 TMEM158Q8WZ71 300 aa2.07□□□□□ -2.08
VPS13C-207ENST00000558919 RAPGEF5Q92565 580 aa2.07□□□□□ -2.08
VPS13C-207ENST00000558919 ZNF670Q9BS34 389 aa2.07□□□□□ -2.08
VPS13C-207ENST00000558919 PLA2G2FQ9BZM2 168 aa2.07□□□□□ -2.08
VPS13C-207ENST00000558919 TPK1Q9H3S4 243 aa2.07□□□□□ -2.08
VPS13C-207ENST00000558919 VCPKMTQ9H867 229 aa2.07□□□□□ -2.08
VPS13C-207ENST00000558919 WDR76Q9H967 626 aa2.07□□□□□ -2.08
VPS13C-207ENST00000558919 CALHM2Q9HA72 323 aa2.07□□□□□ -2.08
VPS13C-207ENST00000558919 GAKO14976 1311 aa2.07□□□□□ -2.08
VPS13C-207ENST00000558919 MAP3K15Q6ZN16 1313 aa2.07□□□□□ -2.08
VPS13C-207ENST00000558919 KIF26AQ9ULI4 1882 aaPredicted RBP2.07□□□□□ -2.08
VPS13C-207ENST00000558919 PDS5BQ9NTI5 1447 aa2.07□□□□□ -2.08
VPS13C-207ENST00000558919 TRIOBPQ9H2D6 2365 aa2.06□□□□□ -2.08
VPS13C-207ENST00000558919 PPIAL4EA0A075B759 164 aa2.06□□□□□ -2.08
VPS13C-207ENST00000558919 A0A0G2JN53 185 aa2.06□□□□□ -2.08
VPS13C-207ENST00000558919 A6NIZ1 184 aa2.06□□□□□ -2.08
VPS13C-207ENST00000558919 VSTM2BA6NLU5 285 aa2.06□□□□□ -2.08
VPS13C-207ENST00000558919 NPIPA7E9PJI5 369 aa2.06□□□□□ -2.08
VPS13C-207ENST00000558919 PPIAL4DF5H284 164 aa2.06□□□□□ -2.08
VPS13C-207ENST00000558919 G3V4G9 280 aa2.06□□□□□ -2.08
VPS13C-207ENST00000558919 RS1O15537 224 aa2.06□□□□□ -2.08
VPS13C-207ENST00000558919 AIREO43918 545 aa2.06□□□□□ -2.08
VPS13C-207ENST00000558919 TNFSF13O75888 250 aa2.06□□□□□ -2.08
VPS13C-207ENST00000558919 MBD3O95983 291 aa2.06□□□□□ -2.08
VPS13C-207ENST00000558919 PLEKP08567 350 aaPredicted RBP2.06□□□□□ -2.08
VPS13C-207ENST00000558919 GIPP09681 153 aaPredicted RBP2.06□□□□□ -2.08
VPS13C-207ENST00000558919 NPIPA8P0DM63 369 aa2.06□□□□□ -2.08
VPS13C-207ENST00000558919 PPIAL4FP0DN26 164 aa2.06□□□□□ -2.08
VPS13C-207ENST00000558919 IGFBP3P17936 291 aaPredicted RBP2.06□□□□□ -2.08
VPS13C-207ENST00000558919 ATP6V1B2P21281 511 aa2.06□□□□□ -2.08
VPS13C-207ENST00000558919 HTR2AP28223 471 aa2.06□□□□□ -2.08
VPS13C-207ENST00000558919 RFC4P35249 363 aa2.06□□□□□ -2.08
VPS13C-207ENST00000558919 ACADVLP49748 655 aa2.06□□□□□ -2.08
VPS13C-207ENST00000558919 DAP3P51398 398 aaKnown RBP2.06□□□□□ -2.08
VPS13C-207ENST00000558919 MNAT1P51948 309 aa2.06□□□□□ -2.08
VPS13C-207ENST00000558919 PLA2G16P53816 162 aa2.06□□□□□ -2.08
VPS13C-207ENST00000558919 HSPA2P54652 639 aa2.06□□□□□ -2.08
VPS13C-207ENST00000558919 DLX1P56177 255 aa2.06□□□□□ -2.08
VPS13C-207ENST00000558919 BPIFB3P59826 476 aa2.06□□□□□ -2.08
VPS13C-207ENST00000558919 RAP1BP61224 184 aa2.06□□□□□ -2.08
VPS13C-207ENST00000558919 PIGGQ5H8A4 983 aa2.06□□□□□ -2.08
VPS13C-207ENST00000558919 TMEM255AQ5JRV8 349 aa2.06□□□□□ -2.08
VPS13C-207ENST00000558919 FAM71E1Q6IPT2 247 aa2.06□□□□□ -2.08
VPS13C-207ENST00000558919 FAM71F2Q6NXP2 309 aa2.06□□□□□ -2.08
VPS13C-207ENST00000558919 PRSS41Q7RTY9 318 aa2.06□□□□□ -2.08
VPS13C-207ENST00000558919 CAMK2N1Q7Z7J9 78 aa2.06□□□□□ -2.08
VPS13C-207ENST00000558919 MFSD6LQ8IWD5 586 aa2.06□□□□□ -2.08
VPS13C-207ENST00000558919 RDH10Q8IZV5 341 aa2.06□□□□□ -2.08
VPS13C-207ENST00000558919 FTMTQ8N4E7 242 aa2.06□□□□□ -2.08
VPS13C-207ENST00000558919 ZNF596Q8TC21 504 aa2.06□□□□□ -2.08
VPS13C-207ENST00000558919 GIMAP1Q8WWP7 306 aa2.06□□□□□ -2.08
VPS13C-207ENST00000558919 NDRG1Q92597 394 aaKnown RBP2.06□□□□□ -2.08
VPS13C-207ENST00000558919 GPA33Q99795 319 aa2.06□□□□□ -2.08
VPS13C-207ENST00000558919 P2RY13Q9BPV8 354 aa2.06□□□□□ -2.08
VPS13C-207ENST00000558919 RSPO3Q9BXY4 272 aaPredicted RBP2.06□□□□□ -2.08
VPS13C-207ENST00000558919 GPR61Q9BZJ8 451 aa2.06□□□□□ -2.08
VPS13C-207ENST00000558919 KRT23Q9C075 422 aa2.06□□□□□ -2.08
VPS13C-207ENST00000558919 C20orf85Q9H1P6 137 aa2.06□□□□□ -2.08
VPS13C-207ENST00000558919 FOLH1BQ9HBA9 442 aa2.06□□□□□ -2.08
VPS13C-207ENST00000558919 LHX9Q9NQ69 397 aa2.06□□□□□ -2.08
VPS13C-207ENST00000558919 GNG12Q9UBI6 72 aa2.06□□□□□ -2.08
VPS13C-207ENST00000558919 ZNF282Q9UDV7 671 aaPredicted RBP2.06□□□□□ -2.08
VPS13C-207ENST00000558919 NPIPA1Q9UND3 350 aa2.06□□□□□ -2.08
VPS13C-207ENST00000558919 IGKV1D-8A0A087WSZ0 117 aa2.05□□□□□ -2.08
VPS13C-207ENST00000558919 CXCL13O43927 109 aa2.05□□□□□ -2.08
VPS13C-207ENST00000558919 SCGB2A1O75556 95 aa2.05□□□□□ -2.08
VPS13C-207ENST00000558919 LGALS2P05162 132 aa2.05□□□□□ -2.08
VPS13C-207ENST00000558919 TDGF1P13385 188 aa2.05□□□□□ -2.08
VPS13C-207ENST00000558919 CYP2F1P24903 491 aa2.05□□□□□ -2.08
VPS13C-207ENST00000558919 OTX2P32243 289 aa2.05□□□□□ -2.08
VPS13C-207ENST00000558919 HPCAL1P37235 193 aa2.05□□□□□ -2.08
VPS13C-207ENST00000558919 PTGDSP41222 190 aa2.05□□□□□ -2.08
VPS13C-207ENST00000558919 RPS9P46781 194 aaKnown RBP2.05□□□□□ -2.08
VPS13C-207ENST00000558919 CAMLGP49069 296 aa2.05□□□□□ -2.08
VPS13C-207ENST00000558919 TDGF1P3P51864 188 aa2.05□□□□□ -2.08
VPS13C-207ENST00000558919 CRISP3P54108 245 aa2.05□□□□□ -2.08
VPS13C-207ENST00000558919 ACTA1P68133 377 aa2.05□□□□□ -2.08
VPS13C-207ENST00000558919 CNTN2Q02246 1040 aa2.05□□□□□ -2.08
VPS13C-207ENST00000558919 MXD4Q14582 209 aaPredicted RBP2.05□□□□□ -2.08
VPS13C-207ENST00000558919 TRIM16LQ309B1 348 aa2.05□□□□□ -2.08
VPS13C-207ENST00000558919 CTRB2Q6GPI1 263 aa2.05□□□□□ -2.08
VPS13C-207ENST00000558919 OR52W1Q6IF63 320 aa2.05□□□□□ -2.08
VPS13C-207ENST00000558919 LYPD1Q8N2G4 141 aa2.05□□□□□ -2.08
VPS13C-207ENST00000558919 CLDN19Q8N6F1 224 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms