RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 GATSQ8NAP1 163 aa3.83□□□□□ -1.8
SPG11-211ENST00000558561 OR5L2Q8NGL0 311 aa3.83□□□□□ -1.8
SPG11-211ENST00000558561 OR4C3Q8NH37 302 aa3.83□□□□□ -1.8
SPG11-211ENST00000558561 OR8K3Q8NH51 312 aa3.83□□□□□ -1.8
SPG11-211ENST00000558561 OSR1Q8TAX0 266 aaPredicted RBP3.83□□□□□ -1.8
SPG11-211ENST00000558561 PAQR8Q8TEZ7 354 aa3.83□□□□□ -1.8
SPG11-211ENST00000558561 DUSP19Q8WTR2 217 aa3.83□□□□□ -1.8
SPG11-211ENST00000558561 ZNF75CPQ92670 426 aaPredicted RBP3.83□□□□□ -1.8
SPG11-211ENST00000558561 SPACA9Q96E40 222 aaPredicted RBP3.83□□□□□ -1.8
SPG11-211ENST00000558561 CCDC126Q96EE4 140 aa3.83□□□□□ -1.8
SPG11-211ENST00000558561 PGM2Q96G03 612 aa3.83□□□□□ -1.8
SPG11-211ENST00000558561 REXO5Q96IC2 774 aaKnown RBP3.83□□□□□ -1.8
SPG11-211ENST00000558561 VSTM2LQ96N03 204 aa3.83□□□□□ -1.8
SPG11-211ENST00000558561 OR52B2Q96RD2 323 aa3.83□□□□□ -1.8
SPG11-211ENST00000558561 BBS4Q96RK4 519 aa3.83□□□□□ -1.8
SPG11-211ENST00000558561 EBF4Q9BQW3 602 aa3.83□□□□□ -1.8
SPG11-211ENST00000558561 CENPKQ9BS16 269 aa3.83□□□□□ -1.8
SPG11-211ENST00000558561 INPP5KQ9BT40 448 aa3.83□□□□□ -1.8
SPG11-211ENST00000558561 ANGPTL4Q9BY76 406 aa3.83□□□□□ -1.8
SPG11-211ENST00000558561 DSN1Q9H410 356 aa3.83□□□□□ -1.8
SPG11-211ENST00000558561 REEP4Q9H6H4 257 aa3.83□□□□□ -1.8
SPG11-211ENST00000558561 ZDHHC11Q9H8X9 412 aa3.83□□□□□ -1.8
SPG11-211ENST00000558561 WDR41Q9HAD4 459 aa3.83□□□□□ -1.8
SPG11-211ENST00000558561 SEPSECSQ9HD40 501 aaKnown RBP3.83□□□□□ -1.8
SPG11-211ENST00000558561 MYNNQ9NPC7 610 aa3.83□□□□□ -1.8
SPG11-211ENST00000558561 EQTNQ9NQ60 294 aa3.83□□□□□ -1.8
SPG11-211ENST00000558561 SLC6A13Q9NSD5 602 aa3.83□□□□□ -1.8
SPG11-211ENST00000558561 ARL8BQ9NVJ2 186 aa3.83□□□□□ -1.8
SPG11-211ENST00000558561 TAS2R7Q9NYW3 318 aa3.83□□□□□ -1.8
SPG11-211ENST00000558561 MED11Q9P086 117 aa3.83□□□□□ -1.8
SPG11-211ENST00000558561 KLHL13Q9P2N7 655 aa3.83□□□□□ -1.8
SPG11-211ENST00000558561 FBXL2Q9UKC9 423 aa3.83□□□□□ -1.8
SPG11-211ENST00000558561 C19orf53Q9UNZ5 99 aaPredicted RBP3.83□□□□□ -1.8
SPG11-211ENST00000558561 FAM215AQ9Y5M1 114 aa3.83□□□□□ -1.8
SPG11-211ENST00000558561 ZNF780BQ9Y6R6 833 aa3.83□□□□□ -1.8
SPG11-211ENST00000558561 SPACA6W5XKT8 324 aa3.83□□□□□ -1.8
SPG11-211ENST00000558561 CENPEQ02224 2701 aa3.83□□□□□ -1.8
SPG11-211ENST00000558561 ITPR2Q14571 2701 aa3.83□□□□□ -1.8
SPG11-211ENST00000558561 HMX3A6NHT5 357 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 PLOD2O00469 737 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 TFECO14948 347 aaPredicted RBP3.82□□□□□ -1.8
SPG11-211ENST00000558561 TO15178 435 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 BIRC5O15392 142 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 RGS14O43566 566 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 SCO2O43819 266 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 PIP5K1CO60331 668 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 FADS1O60427 444 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 PLOD3O60568 738 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 KLHL41O60662 606 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 FCMRO60667 390 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 SNNO75324 88 aaPredicted RBP3.82□□□□□ -1.8
SPG11-211ENST00000558561 PSMG1O95456 288 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 NTN1O95631 604 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 CRYABP02511 175 aaKnown RBP3.82□□□□□ -1.8
SPG11-211ENST00000558561 P04436 131 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 SERPINE1P05121 402 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 COX7A2P14406 83 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 H2AFXP16104 143 aaPredicted RBP3.82□□□□□ -1.8
SPG11-211ENST00000558561 ZNF24P17028 368 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 IL11P20809 199 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 PTPN6P29350 595 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 HPDP32754 393 aaPredicted RBP3.82□□□□□ -1.8
SPG11-211ENST00000558561 DCTP40126 519 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 FRKP42685 505 aaPredicted RBP3.82□□□□□ -1.8
SPG11-211ENST00000558561 CDKN2CP42773 168 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 RPL14P50914 215 aaKnown RBP3.82□□□□□ -1.8
SPG11-211ENST00000558561 SUCLG1P53597 346 aaKnown RBP3.82□□□□□ -1.8
SPG11-211ENST00000558561 DLX5P56178 289 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 CLDN8P56748 225 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 B3GALT5-AS1P59052 145 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 HBA1P69905 142 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 EMX2Q04743 252 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 ZNF763Q0D2J5 394 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 BIKQ13323 160 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 PDE7AQ13946 482 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 HEPACAMQ14CZ8 416 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 MAPK11Q15759 364 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 TOMM34Q15785 309 aaPredicted RBP3.82□□□□□ -1.8
SPG11-211ENST00000558561 NDUFAF6Q330K2 333 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 GTDC1Q4AE62 458 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 KRTCAP3Q53RY4 240 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 SPIN4Q56A73 249 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 HHATQ5VTY9 493 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 TIGD3Q6B0B8 471 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 SLC18B1Q6NT16 456 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 OPN5Q6U736 354 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 ANGPTL8Q6UXH0 198 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 Q6ZPB1 254 aaPredicted RBP3.82□□□□□ -1.8
SPG11-211ENST00000558561 NUP54Q7Z3B4 507 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 C10orf111Q8N326 155 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 OR2L13Q8N349 312 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 FBXW8Q8N3Y1 598 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 TMEM178AQ8NBL3 297 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 NAXEQ8NCW5 288 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 TNIP2Q8NFZ5 429 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 OR7G1Q8NGA0 311 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 OR5D16Q8NGK9 328 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 OR9I1Q8NGQ6 314 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 OR5AK3PQ8NH89 298 aa3.82□□□□□ -1.8
SPG11-211ENST00000558561 FAM57AQ8TBR7 257 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms