RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 OR10D3Q8NH80 312 aa19.12■□□□□ 0.65
CASC4-204ENST00000557945 TUBA1CQ9BQE3 449 aa19.12■□□□□ 0.65
CASC4-204ENST00000557945 TCRBV3S1A0A5B6 114 aa19.11■□□□□ 0.65
CASC4-204ENST00000557945 PYCARD-AS1I3L0S3 204 aa19.11■□□□□ 0.65
CASC4-204ENST00000557945 FFAR1O14842 300 aa19.11■□□□□ 0.65
CASC4-204ENST00000557945 ADAMDEC1O15204 470 aa19.11■□□□□ 0.65
CASC4-204ENST00000557945 CXCL13O43927 109 aa19.11■□□□□ 0.65
CASC4-204ENST00000557945 WDR1O75083 606 aa19.11■□□□□ 0.65
CASC4-204ENST00000557945 LYPD3O95274 346 aa19.11■□□□□ 0.65
CASC4-204ENST00000557945 GPIP06744 558 aa19.11■□□□□ 0.65
CASC4-204ENST00000557945 UMPSP11172 480 aa19.11■□□□□ 0.65
CASC4-204ENST00000557945 GABRA1P14867 456 aa19.11■□□□□ 0.65
CASC4-204ENST00000557945 RHCEP18577 417 aa19.11■□□□□ 0.65
CASC4-204ENST00000557945 ACVR2AP27037 513 aa19.11■□□□□ 0.65
CASC4-204ENST00000557945 CLK1P49759 484 aaKnown RBP19.11■□□□□ 0.65
CASC4-204ENST00000557945 CARD18P57730 90 aa19.11■□□□□ 0.65
CASC4-204ENST00000557945 C1QL3Q5VWW1 255 aa19.11■□□□□ 0.65
CASC4-204ENST00000557945 PPP4R4Q6NUP7 873 aa19.11■□□□□ 0.65
CASC4-204ENST00000557945 OFCC1Q8IZS5 231 aa19.11■□□□□ 0.65
CASC4-204ENST00000557945 CANT1Q8WVQ1 401 aa19.11■□□□□ 0.65
CASC4-204ENST00000557945 OSTF1Q92882 214 aa19.11■□□□□ 0.65
CASC4-204ENST00000557945 MPP4Q96JB8 637 aa19.11■□□□□ 0.65
CASC4-204ENST00000557945 ARL5BQ96KC2 179 aa19.11■□□□□ 0.65
CASC4-204ENST00000557945 TRIB1Q96RU8 372 aa19.11■□□□□ 0.65
CASC4-204ENST00000557945 TP63Q9H3D4 680 aaPredicted RBP19.11■□□□□ 0.65
CASC4-204ENST00000557945 RAP2AP10114 183 aa19.1■□□□□ 0.65
CASC4-204ENST00000557945 THRBP10828 461 aa19.1■□□□□ 0.65
CASC4-204ENST00000557945 MYBPHQ13203 477 aa19.1■□□□□ 0.65
CASC4-204ENST00000557945 CCNIQ14094 377 aa19.1■□□□□ 0.65
CASC4-204ENST00000557945 SF3B4Q15427 424 aaKnown RBP eCLIP19.1■□□□□ 0.65
CASC4-204ENST00000557945 ACSF3Q4G176 576 aaPredicted RBP19.1■□□□□ 0.65
CASC4-204ENST00000557945 C1orf185Q5T7R7 199 aa19.1■□□□□ 0.65
CASC4-204ENST00000557945 TTC33Q6PID6 262 aaPredicted RBP19.1■□□□□ 0.65
CASC4-204ENST00000557945 WDR88Q6ZMY6 472 aa19.1■□□□□ 0.65
CASC4-204ENST00000557945 NKAIN4Q8IVV8 208 aa19.1■□□□□ 0.65
CASC4-204ENST00000557945 ZPLD1Q8TCW7 415 aa19.1■□□□□ 0.65
CASC4-204ENST00000557945 STK35Q8TDR2 534 aa19.1■□□□□ 0.65
CASC4-204ENST00000557945 ZNF845Q96IR2 970 aaPredicted RBP19.1■□□□□ 0.65
CASC4-204ENST00000557945 ADGRG7Q96K78 797 aa19.1■□□□□ 0.65
CASC4-204ENST00000557945 PIP5K1AQ99755 562 aa19.1■□□□□ 0.65
CASC4-204ENST00000557945 POTEKPQ9BYX7 375 aa19.1■□□□□ 0.65
CASC4-204ENST00000557945 TIGARQ9NQ88 270 aa19.1■□□□□ 0.65
CASC4-204ENST00000557945 HDGFL3Q9Y3E1 203 aa19.1■□□□□ 0.65
CASC4-204ENST00000557945 POLEQ07864 2286 aa19.1■□□□□ 0.65
CASC4-204ENST00000557945 IGKV1D-42A0A075B6H8 117 aa19.09■□□□□ 0.65
CASC4-204ENST00000557945 CLCA1A8K7I4 914 aa19.09■□□□□ 0.65
CASC4-204ENST00000557945 PTGER4P35408 488 aa19.09■□□□□ 0.65
CASC4-204ENST00000557945 CA7P43166 264 aa19.09■□□□□ 0.65
CASC4-204ENST00000557945 OR2B6P58173 313 aa19.09■□□□□ 0.65
CASC4-204ENST00000557945 SPIBQ01892 262 aa19.09■□□□□ 0.65
CASC4-204ENST00000557945 TRAM2Q15035 370 aa19.09■□□□□ 0.65
CASC4-204ENST00000557945 IQCCQ4KMZ1 466 aa19.09■□□□□ 0.65
CASC4-204ENST00000557945 C1orf140Q5VVS0 124 aa19.09■□□□□ 0.65
CASC4-204ENST00000557945 RPTNQ6XPR3 784 aa19.09■□□□□ 0.65
CASC4-204ENST00000557945 TMPPEQ6ZT21 453 aa19.09■□□□□ 0.65
CASC4-204ENST00000557945 ZNF347Q96SE7 839 aa19.09■□□□□ 0.65
CASC4-204ENST00000557945 PRSS27Q9BQR3 290 aa19.09■□□□□ 0.65
CASC4-204ENST00000557945 CHID1Q9BWS9 393 aa19.09■□□□□ 0.65
CASC4-204ENST00000557945 COQ10BQ9H8M1 238 aa19.09■□□□□ 0.65
CASC4-204ENST00000557945 NMNAT1Q9HAN9 279 aaPredicted RBP19.09■□□□□ 0.65
CASC4-204ENST00000557945 TESMINQ9Y4I5 508 aa19.09■□□□□ 0.65
CASC4-204ENST00000557945 ESPL1Q14674 2120 aa19.09■□□□□ 0.65
CASC4-204ENST00000557945 ANKRD65E5RJM6 399 aa19.08■□□□□ 0.65
CASC4-204ENST00000557945 SULT2B1O00204 365 aa19.08■□□□□ 0.65
CASC4-204ENST00000557945 KPNA4O00629 521 aaPredicted RBP19.08■□□□□ 0.65
CASC4-204ENST00000557945 PRSS23O95084 383 aa19.08■□□□□ 0.65
CASC4-204ENST00000557945 AHSA1O95433 338 aa19.08■□□□□ 0.65
CASC4-204ENST00000557945 H1F0P07305 194 aaKnown RBP19.08■□□□□ 0.65
CASC4-204ENST00000557945 STSP08842 583 aa19.08■□□□□ 0.65
CASC4-204ENST00000557945 HOXD4P09016 255 aaPredicted RBP19.08■□□□□ 0.65
CASC4-204ENST00000557945 IDUAP35475 653 aa19.08■□□□□ 0.65
CASC4-204ENST00000557945 DIO1P49895 249 aa19.08■□□□□ 0.65
CASC4-204ENST00000557945 KPNB1Q14974 876 aaKnown RBP19.08■□□□□ 0.65
CASC4-204ENST00000557945 PLXDC2Q6UX71 529 aa19.08■□□□□ 0.65
CASC4-204ENST00000557945 LINC00114Q6XXX2 140 aa19.08■□□□□ 0.65
CASC4-204ENST00000557945 PIWIL3Q7Z3Z3 882 aaKnown RBP19.08■□□□□ 0.65
CASC4-204ENST00000557945 PIK3C3Q8NEB9 887 aa19.08■□□□□ 0.65
CASC4-204ENST00000557945 TMEM255BQ8WV15 326 aa19.08■□□□□ 0.65
CASC4-204ENST00000557945 KTI12Q96EK9 354 aaPredicted RBP19.08■□□□□ 0.65
CASC4-204ENST00000557945 EPYCQ99645 322 aa19.08■□□□□ 0.65
CASC4-204ENST00000557945 TMEM43Q9BTV4 400 aa19.08■□□□□ 0.65
CASC4-204ENST00000557945 PAQR5Q9NXK6 330 aaPredicted RBP19.08■□□□□ 0.65
CASC4-204ENST00000557945 NPIPB7O75200 414 aa19.07■□□□□ 0.64
CASC4-204ENST00000557945 SYNGR4O95473 234 aa19.07■□□□□ 0.64
CASC4-204ENST00000557945 PLA2G2AP14555 144 aa19.07■□□□□ 0.64
CASC4-204ENST00000557945 FUT4P22083 530 aa19.07■□□□□ 0.64
CASC4-204ENST00000557945 MAGEA2P43356 314 aa19.07■□□□□ 0.64
CASC4-204ENST00000557945 RPS5P46782 204 aaKnown RBP19.07■□□□□ 0.64
CASC4-204ENST00000557945 CSNK2A1P68400 391 aaPredicted RBP19.07■□□□□ 0.64
CASC4-204ENST00000557945 EGR4Q05215 589 aa19.07■□□□□ 0.64
CASC4-204ENST00000557945 PON3Q15166 354 aa19.07■□□□□ 0.64
CASC4-204ENST00000557945 FGD3Q5JSP0 725 aa19.07■□□□□ 0.64
CASC4-204ENST00000557945 B3GNT6Q6ZMB0 384 aa19.07■□□□□ 0.64
CASC4-204ENST00000557945 P4HA3Q7Z4N8 544 aa19.07■□□□□ 0.64
CASC4-204ENST00000557945 C10orf53Q8N6V4 93 aa19.07■□□□□ 0.64
CASC4-204ENST00000557945 OR52J3Q8NH60 311 aa19.07■□□□□ 0.64
CASC4-204ENST00000557945 TAPBPLQ9BX59 468 aa19.07■□□□□ 0.64
CASC4-204ENST00000557945 SRXN1Q9BYN0 137 aa19.07■□□□□ 0.64
CASC4-204ENST00000557945 PRRG4Q9BZD6 226 aa19.07■□□□□ 0.64
CASC4-204ENST00000557945 MAN2C1Q9NTJ4 1040 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms