RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 ST3GAL3Q11203 375 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 CDH17Q12864 832 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 XRCC4Q13426 336 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 GPR176Q14439 515 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 FASTKD3Q14CZ7 662 aaKnown RBP3.16□□□□□ -1.9
TDP1-217ENST00000557782 CYTH1Q15438 398 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 ISXQ2M1V0 245 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 HLA-BQ31612 363 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 HSDL1Q3SXM5 330 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 ZNF672Q499Z4 452 aaPredicted RBP3.16□□□□□ -1.9
TDP1-217ENST00000557782 MS4A13Q5J8X5 152 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 STUMQ69YW2 141 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 C11orf87Q6NUJ2 197 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 REEP3Q6NUK4 255 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 TTC23LQ6PF05 361 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 ULK3Q6PHR2 472 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 SYCE2Q6PIF2 218 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 C19orf48Q6RUI8 117 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 CARM1Q86X55 608 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 CMTM8Q8IZV2 173 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 JAGN1Q8N5M9 183 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 TPRX1Q8N7U7 411 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 C8orf31Q8N9H6 132 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 ZNRF1Q8ND25 227 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 OR10V1Q8NGI7 309 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 OR9A4Q8NGU2 314 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 CLHC1Q8NHS4 586 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 UFD1Q92890 307 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 CCDC126Q96EE4 140 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 MOCOSQ96EN8 888 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 TMEM80Q96HE8 168 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 OPALINQ96PE5 141 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 XPO6Q96QU8 1125 aaKnown RBP3.16□□□□□ -1.9
TDP1-217ENST00000557782 HSD17B14Q9BPX1 270 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 ZNF670Q9BS34 389 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 CLEC7AQ9BXN2 247 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 RBKSQ9H477 322 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 IL26Q9NPH9 171 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 MEPEQ9NQ76 525 aaPredicted RBP3.16□□□□□ -1.9
TDP1-217ENST00000557782 EXOSC3Q9NQT5 275 aaKnown RBP3.16□□□□□ -1.9
TDP1-217ENST00000557782 ABCC13Q9NSE7 274 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 MYEF2Q9P2K5 600 aaKnown RBP3.16□□□□□ -1.9
TDP1-217ENST00000557782 RARRES3Q9UL19 164 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 STAP1Q9ULZ2 295 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 FLVCR2Q9UPI3 526 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 USP6P35125 1406 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 NEURL4Q96JN8 1562 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 ZNF521Q96K83 1311 aa3.16□□□□□ -1.9
TDP1-217ENST00000557782 NSG1A0A0A6YYJ2 146 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 A0A1W2PRD5 423 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 TMEM120BA0PK00 339 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 FAM172BPA6NC97 362 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 OR5B21A6NL26 309 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 A8MUA0 341 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 NR5A2O00482 541 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 DYNC1I1O14576 645 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 AIREO43918 545 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 SOX15O60248 233 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 OR7A10O76100 309 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 IGHG1P01857 330 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 BCKDHBP21953 392 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 UGT1A4P22310 534 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 PRKACGP22612 351 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 FOXN2P32314 431 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 MAP2K2P36507 400 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 VHLP40337 213 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 CDKN2AP42771 156 aaKnown RBP3.15□□□□□ -1.91
TDP1-217ENST00000557782 NSG1P42857 185 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 SLC1A2P43004 574 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 YAP1P46937 504 aaKnown RBP3.15□□□□□ -1.91
TDP1-217ENST00000557782 TMED10P49755 219 aaKnown RBP3.15□□□□□ -1.91
TDP1-217ENST00000557782 ATP4BP51164 291 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 HNRNPA3P51991 378 aaKnown RBP3.15□□□□□ -1.91
TDP1-217ENST00000557782 SNRPD1P62314 119 aaKnown RBP3.15□□□□□ -1.91
TDP1-217ENST00000557782 TNNC1P63316 161 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 SRPXP78539 464 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 VLDLRP98155 873 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 PUDPQ08623 228 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 SELENBP1Q13228 472 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 IL18R1Q13478 541 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 OR5I1Q13606 314 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 RCAN2Q14206 197 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 DGUOKQ16854 277 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 LY6G6FQ5SQ64 297 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 GPR157Q5UAW9 335 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 FAM219BQ5XKK7 198 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 FAM199XQ6PEV8 388 aaPredicted RBP3.15□□□□□ -1.91
TDP1-217ENST00000557782 CCDC137Q6PK04 289 aaKnown RBP3.15□□□□□ -1.91
TDP1-217ENST00000557782 CERS6Q6ZMG9 384 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.15□□□□□ -1.91
TDP1-217ENST00000557782 C9orf47Q6ZRZ4 202 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 Q6ZSR9 355 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 FRA10AC1Q70Z53 315 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 SLC26A9Q7LBE3 791 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 MRPL21Q7Z2W9 205 aaKnown RBP3.15□□□□□ -1.91
TDP1-217ENST00000557782 FAM9CQ8IZT9 166 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 TTC29Q8NA56 475 aaPredicted RBP3.15□□□□□ -1.91
TDP1-217ENST00000557782 INO80EQ8NBZ0 244 aaPredicted RBP3.15□□□□□ -1.91
TDP1-217ENST00000557782 FBXO36Q8NEA4 188 aa3.15□□□□□ -1.91
TDP1-217ENST00000557782 CATSPER1Q8NEC5 780 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms