RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 AP3M1Q9Y2T2 418 aa11.17□□□□□ -0.62
SLIRP-211ENST00000557623 TMED7Q9Y3B3 224 aa11.17□□□□□ -0.62
SLIRP-211ENST00000557623 CHST2Q9Y4C5 530 aa11.17□□□□□ -0.62
SLIRP-211ENST00000557623 FXYD1O00168 92 aa11.16□□□□□ -0.62
SLIRP-211ENST00000557623 DNPH1O43598 174 aa11.16□□□□□ -0.62
SLIRP-211ENST00000557623 COX4I1P13073 169 aa11.16□□□□□ -0.62
SLIRP-211ENST00000557623 AQP1P29972 269 aa11.16□□□□□ -0.62
SLIRP-211ENST00000557623 KIR2DL3P43628 341 aa11.16□□□□□ -0.62
SLIRP-211ENST00000557623 PCYT1AP49585 367 aa11.16□□□□□ -0.62
SLIRP-211ENST00000557623 GYS2P54840 703 aa11.16□□□□□ -0.62
SLIRP-211ENST00000557623 PCBP3P57721 371 aaKnown RBP11.16□□□□□ -0.62
SLIRP-211ENST00000557623 VMACQ2NL98 169 aa11.16□□□□□ -0.62
SLIRP-211ENST00000557623 TMEM201Q5SNT2 666 aa11.16□□□□□ -0.62
SLIRP-211ENST00000557623 ERICH5Q6P6B1 374 aa11.16□□□□□ -0.62
SLIRP-211ENST00000557623 BTLAQ7Z6A9 289 aa11.16□□□□□ -0.62
SLIRP-211ENST00000557623 ARPINQ7Z6K5 226 aa11.16□□□□□ -0.62
SLIRP-211ENST00000557623 PATL1Q86TB9 770 aaKnown RBP11.16□□□□□ -0.62
SLIRP-211ENST00000557623 ZZZ3Q8IYH5 903 aa11.16□□□□□ -0.62
SLIRP-211ENST00000557623 RCN3Q96D15 328 aa11.16□□□□□ -0.62
SLIRP-211ENST00000557623 CMTM5Q96DZ9 223 aa11.16□□□□□ -0.62
SLIRP-211ENST00000557623 ZNF559Q9BR84 538 aa11.16□□□□□ -0.62
SLIRP-211ENST00000557623 SLC39A3Q9BRY0 314 aa11.16□□□□□ -0.62
SLIRP-211ENST00000557623 FANCFQ9NPI8 374 aa11.16□□□□□ -0.62
SLIRP-211ENST00000557623 PLSCR4Q9NRQ2 329 aa11.16□□□□□ -0.62
SLIRP-211ENST00000557623 GALNT8Q9NY28 637 aa11.16□□□□□ -0.62
SLIRP-211ENST00000557623 ELOVL5Q9NYP7 299 aa11.16□□□□□ -0.62
SLIRP-211ENST00000557623 KLHL9Q9P2J3 617 aa11.16□□□□□ -0.62
SLIRP-211ENST00000557623 RPS6KB2Q9UBS0 482 aa11.16□□□□□ -0.62
SLIRP-211ENST00000557623 TRAPPC4Q9Y296 219 aa11.16□□□□□ -0.62
SLIRP-211ENST00000557623 PKDREJQ9NTG1 2253 aa11.16□□□□□ -0.62
SLIRP-211ENST00000557623 TMEM72A0PK05 275 aa11.15□□□□□ -0.62
SLIRP-211ENST00000557623 TUBAL3A6NHL2 446 aa11.15□□□□□ -0.62
SLIRP-211ENST00000557623 M0QX08 132 aa11.15□□□□□ -0.62
SLIRP-211ENST00000557623 CYTIPO60759 359 aa11.15□□□□□ -0.62
SLIRP-211ENST00000557623 MFN2O95140 757 aa11.15□□□□□ -0.62
SLIRP-211ENST00000557623 CGAP01215 116 aa11.15□□□□□ -0.62
SLIRP-211ENST00000557623 C8BP07358 591 aa11.15□□□□□ -0.62
SLIRP-211ENST00000557623 PRG2P13727 222 aa11.15□□□□□ -0.62
SLIRP-211ENST00000557623 CCNA2P20248 432 aa11.15□□□□□ -0.62
SLIRP-211ENST00000557623 CPOXP36551 454 aa11.15□□□□□ -0.62
SLIRP-211ENST00000557623 GZMMP51124 257 aa11.15□□□□□ -0.62
SLIRP-211ENST00000557623 NCALDP61601 193 aa11.15□□□□□ -0.62
SLIRP-211ENST00000557623 MYBPHQ13203 477 aa11.15□□□□□ -0.62
SLIRP-211ENST00000557623 RABL3Q5HYI8 236 aa11.15□□□□□ -0.62
SLIRP-211ENST00000557623 STK32CQ86UX6 486 aa11.15□□□□□ -0.62
SLIRP-211ENST00000557623 CALHM3Q86XJ0 350 aa11.15□□□□□ -0.62
SLIRP-211ENST00000557623 POU5F2Q8N7G0 328 aa11.15□□□□□ -0.62
SLIRP-211ENST00000557623 SLC26A7Q8TE54 656 aa11.15□□□□□ -0.62
SLIRP-211ENST00000557623 ABHD3Q8WU67 409 aa11.15□□□□□ -0.62
SLIRP-211ENST00000557623 RASSF5Q8WWW0 418 aa11.15□□□□□ -0.62
SLIRP-211ENST00000557623 ARL5BQ96KC2 179 aa11.15□□□□□ -0.62
SLIRP-211ENST00000557623 POTEKPQ9BYX7 375 aa11.15□□□□□ -0.62
SLIRP-211ENST00000557623 TRIM2Q9C040 744 aa11.15□□□□□ -0.62
SLIRP-211ENST00000557623 EFCAB1Q9HAE3 211 aa11.15□□□□□ -0.62
SLIRP-211ENST00000557623 C12orf10Q9HB07 376 aa11.15□□□□□ -0.62
SLIRP-211ENST00000557623 TMEM181Q9P2C4 612 aa11.15□□□□□ -0.62
SLIRP-211ENST00000557623 KLHL13Q9P2N7 655 aa11.15□□□□□ -0.62
SLIRP-211ENST00000557623 TESQ9UGI8 421 aaKnown RBP11.15□□□□□ -0.62
SLIRP-211ENST00000557623 CLEC4AQ9UMR7 237 aa11.15□□□□□ -0.62
SLIRP-211ENST00000557623 IGHV3-15A0A0B4J1V0 119 aa11.14□□□□□ -0.63
SLIRP-211ENST00000557623 CYSRT1A8MQ03 144 aa11.14□□□□□ -0.63
SLIRP-211ENST00000557623 A8MVM7 634 aa11.14□□□□□ -0.63
SLIRP-211ENST00000557623 AIM2O14862 343 aa11.14□□□□□ -0.63
SLIRP-211ENST00000557623 SMAD9O15198 467 aaKnown RBP11.14□□□□□ -0.63
SLIRP-211ENST00000557623 FRS3O43559 492 aa11.14□□□□□ -0.63
SLIRP-211ENST00000557623 TPST1O60507 370 aa11.14□□□□□ -0.63
SLIRP-211ENST00000557623 EIF1BO60739 113 aaKnown RBP11.14□□□□□ -0.63
SLIRP-211ENST00000557623 FESP07332 822 aa11.14□□□□□ -0.63
SLIRP-211ENST00000557623 YES1P07947 543 aa11.14□□□□□ -0.63
SLIRP-211ENST00000557623 POU2F1P14859 743 aa11.14□□□□□ -0.63
SLIRP-211ENST00000557623 PRDX6P30041 224 aa11.14□□□□□ -0.63
SLIRP-211ENST00000557623 AGTR1P30556 359 aa11.14□□□□□ -0.63
SLIRP-211ENST00000557623 CD79BP40259 229 aa11.14□□□□□ -0.63
SLIRP-211ENST00000557623 RGS8P57771 180 aaPredicted RBP11.14□□□□□ -0.63
SLIRP-211ENST00000557623 OR2B6P58173 313 aa11.14□□□□□ -0.63
SLIRP-211ENST00000557623 SLC35A1P78382 337 aa11.14□□□□□ -0.63
SLIRP-211ENST00000557623 DMTNQ08495 405 aa11.14□□□□□ -0.63
SLIRP-211ENST00000557623 RASGEF1BQ0VAM2 473 aa11.14□□□□□ -0.63
SLIRP-211ENST00000557623 VEZF1Q14119 521 aa11.14□□□□□ -0.63
SLIRP-211ENST00000557623 CCDC80Q76M96 950 aa11.14□□□□□ -0.63
SLIRP-211ENST00000557623 RANBP3LQ86VV4 465 aaPredicted RBP11.14□□□□□ -0.63
SLIRP-211ENST00000557623 ZNF295-AS1Q8N0V1 137 aa11.14□□□□□ -0.63
SLIRP-211ENST00000557623 LSMEM1Q8N8F7 131 aa11.14□□□□□ -0.63
SLIRP-211ENST00000557623 OR52E4Q8NGH9 312 aa11.14□□□□□ -0.63
SLIRP-211ENST00000557623 FAM222BQ8WU58 562 aa11.14□□□□□ -0.63
SLIRP-211ENST00000557623 DNAJA4Q8WW22 397 aaPredicted RBP11.14□□□□□ -0.63
SLIRP-211ENST00000557623 HOPXQ9BPY8 73 aaPredicted RBP11.14□□□□□ -0.63
SLIRP-211ENST00000557623 NAA11Q9BSU3 229 aaPredicted RBP11.14□□□□□ -0.63
SLIRP-211ENST00000557623 OR11A1Q9GZK7 315 aa11.14□□□□□ -0.63
SLIRP-211ENST00000557623 MYLK2Q9H1R3 596 aa11.14□□□□□ -0.63
SLIRP-211ENST00000557623 OPN3Q9H1Y3 402 aaPredicted RBP11.14□□□□□ -0.63
SLIRP-211ENST00000557623 PIF1Q9H611 641 aa11.14□□□□□ -0.63
SLIRP-211ENST00000557623 BCO1Q9HAY6 547 aa11.14□□□□□ -0.63
SLIRP-211ENST00000557623 SELENONQ9NZV5 590 aa11.14□□□□□ -0.63
SLIRP-211ENST00000557623 ARL2BPQ9Y2Y0 163 aa11.14□□□□□ -0.63
SLIRP-211ENST00000557623 ELOA3DA6NLF2 546 aaPredicted RBP11.13□□□□□ -0.63
SLIRP-211ENST00000557623 ZNF724A8MTY0 619 aa11.13□□□□□ -0.63
SLIRP-211ENST00000557623 FAM220BPB1ANY3 271 aa11.13□□□□□ -0.63
SLIRP-211ENST00000557623 NDUFAB1O14561 156 aa11.13□□□□□ -0.63
SLIRP-211ENST00000557623 LILRA1O75019 489 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms