RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 INHBBP09529 407 aa16.71■□□□□ 0.27
SDR39U1-220ENST00000556548 LIMS3P0CW19 117 aa16.71■□□□□ 0.27
SDR39U1-220ENST00000556548 LIMS4P0CW20 117 aa16.71■□□□□ 0.27
SDR39U1-220ENST00000556548 PRR23D2P0DMB1 279 aaPredicted RBP16.71■□□□□ 0.27
SDR39U1-220ENST00000556548 FGF5P12034 268 aa16.71■□□□□ 0.27
SDR39U1-220ENST00000556548 TACR3P29371 465 aa16.71■□□□□ 0.27
SDR39U1-220ENST00000556548 SLC6A6P31641 620 aa16.71■□□□□ 0.27
SDR39U1-220ENST00000556548 RPL4P36578 427 aaKnown RBP16.71■□□□□ 0.27
SDR39U1-220ENST00000556548 MOGQ16653 247 aa16.71■□□□□ 0.27
SDR39U1-220ENST00000556548 NIPAL3Q6P499 406 aa16.71■□□□□ 0.27
SDR39U1-220ENST00000556548 SLC15A4Q8N697 577 aa16.71■□□□□ 0.27
SDR39U1-220ENST00000556548 ZFP41Q8N8Y5 198 aa16.71■□□□□ 0.27
SDR39U1-220ENST00000556548 OR4K13Q8NH42 304 aa16.71■□□□□ 0.27
SDR39U1-220ENST00000556548 SMAP2Q8WU79 429 aaPredicted RBP16.71■□□□□ 0.27
SDR39U1-220ENST00000556548 SECISBP2Q96T21 854 aaKnown RBP16.71■□□□□ 0.27
SDR39U1-220ENST00000556548 WDR77Q9BQA1 342 aaPredicted RBP16.71■□□□□ 0.27
SDR39U1-220ENST00000556548 LAT2Q9GZY6 243 aa16.71■□□□□ 0.27
SDR39U1-220ENST00000556548 EXOSC3Q9NQT5 275 aaKnown RBP16.71■□□□□ 0.27
SDR39U1-220ENST00000556548 IER3IP1Q9Y5U9 82 aa16.71■□□□□ 0.27
SDR39U1-220ENST00000556548 SPIN1Q9Y657 262 aaPredicted RBP16.71■□□□□ 0.27
SDR39U1-220ENST00000556548 RIIAD1A6NNX1 92 aa16.71■□□□□ 0.27
SDR39U1-220ENST00000556548 CPNE3O75131 537 aaKnown RBP16.71■□□□□ 0.27
SDR39U1-220ENST00000556548 MRPL3P09001 348 aaKnown RBP16.71■□□□□ 0.27
SDR39U1-220ENST00000556548 EVI2BP34910 448 aa16.71■□□□□ 0.27
SDR39U1-220ENST00000556548 SERPINB10P48595 397 aa16.71■□□□□ 0.27
SDR39U1-220ENST00000556548 EIF2B2P49770 351 aaKnown RBP16.71■□□□□ 0.27
SDR39U1-220ENST00000556548 PNLIPRP2P54317 469 aa16.71■□□□□ 0.27
SDR39U1-220ENST00000556548 FBXW4P57775 412 aa16.71■□□□□ 0.27
SDR39U1-220ENST00000556548 ZFP36L1Q07352 338 aaKnown RBP16.71■□□□□ 0.27
SDR39U1-220ENST00000556548 ITGADQ13349 1161 aa16.71■□□□□ 0.27
SDR39U1-220ENST00000556548 RNLSQ5VYX0 342 aa16.71■□□□□ 0.27
SDR39U1-220ENST00000556548 MEPCEQ7L2J0 689 aaKnown RBP16.71■□□□□ 0.27
SDR39U1-220ENST00000556548 CPEB2Q7Z5Q1 589 aaKnown RBP16.71■□□□□ 0.27
SDR39U1-220ENST00000556548 BMPERQ8N8U9 685 aa16.71■□□□□ 0.27
SDR39U1-220ENST00000556548 SDR9C7Q8NEX9 313 aa16.71■□□□□ 0.27
SDR39U1-220ENST00000556548 OR52E2Q8NGJ4 325 aa16.71■□□□□ 0.27
SDR39U1-220ENST00000556548 TM9SF4Q92544 642 aa16.71■□□□□ 0.27
SDR39U1-220ENST00000556548 ARPC5LQ9BPX5 153 aa16.71■□□□□ 0.27
SDR39U1-220ENST00000556548 RXFP3Q9NSD7 469 aa16.71■□□□□ 0.27
SDR39U1-220ENST00000556548 OSGIN1Q9UJX0 560 aa16.71■□□□□ 0.27
SDR39U1-220ENST00000556548 ALG1L2C9J202 215 aa16.7■□□□□ 0.26
SDR39U1-220ENST00000556548 BLOC1S5-TXNDC5H3BN57 136 aa16.7■□□□□ 0.26
SDR39U1-220ENST00000556548 SERPINI2O75830 405 aa16.7■□□□□ 0.26
SDR39U1-220ENST00000556548 NDUFB2O95178 105 aa16.7■□□□□ 0.26
SDR39U1-220ENST00000556548 SLC1A3P43003 542 aa16.7■□□□□ 0.26
SDR39U1-220ENST00000556548 WNT4P56705 351 aa16.7■□□□□ 0.26
SDR39U1-220ENST00000556548 NRG3P56975 720 aa16.7■□□□□ 0.26
SDR39U1-220ENST00000556548 IL11RAQ14626 422 aa16.7■□□□□ 0.26
SDR39U1-220ENST00000556548 ZNF791Q3KP31 576 aaPredicted RBP16.7■□□□□ 0.26
SDR39U1-220ENST00000556548 CENPSQ8N2Z9 138 aa16.7■□□□□ 0.26
SDR39U1-220ENST00000556548 OR9Q1Q8NGQ5 310 aa16.7■□□□□ 0.26
SDR39U1-220ENST00000556548 DUSP19Q8WTR2 217 aa16.7■□□□□ 0.26
SDR39U1-220ENST00000556548 MOGAT1Q96PD6 335 aa16.7■□□□□ 0.26
SDR39U1-220ENST00000556548 LPAR4Q99677 370 aa16.7■□□□□ 0.26
SDR39U1-220ENST00000556548 KLHL1Q9NR64 748 aa16.7■□□□□ 0.26
SDR39U1-220ENST00000556548 TNFRSF10DQ9UBN6 386 aa16.7■□□□□ 0.26
SDR39U1-220ENST00000556548 CORINQ9Y5Q5 1042 aa16.7■□□□□ 0.26
SDR39U1-220ENST00000556548 NPFFR2Q9Y5X5 522 aa16.7■□□□□ 0.26
SDR39U1-220ENST00000556548 R4GN57 208 aa16.7■□□□□ 0.26
SDR39U1-220ENST00000556548 FREM2Q5SZK8 3169 aa16.7■□□□□ 0.26
SDR39U1-220ENST00000556548 IRGMA1A4Y4 181 aa16.7■□□□□ 0.26
SDR39U1-220ENST00000556548 OR7A10O76100 309 aa16.7■□□□□ 0.26
SDR39U1-220ENST00000556548 PNMTP11086 282 aa16.7■□□□□ 0.26
SDR39U1-220ENST00000556548 PEPDP12955 493 aa16.7■□□□□ 0.26
SDR39U1-220ENST00000556548 HIST1H1CP16403 213 aaKnown RBP16.7■□□□□ 0.26
SDR39U1-220ENST00000556548 HK1P19367 917 aa16.7■□□□□ 0.26
SDR39U1-220ENST00000556548 GRK6P43250 576 aa16.7■□□□□ 0.26
SDR39U1-220ENST00000556548 EGR4Q05215 589 aa16.7■□□□□ 0.26
SDR39U1-220ENST00000556548 C19orf48Q6RUI8 117 aa16.7■□□□□ 0.26
SDR39U1-220ENST00000556548 USP43Q70EL4 1123 aa16.7■□□□□ 0.26
SDR39U1-220ENST00000556548 FAM98AQ8NCA5 519 aaKnown RBP16.7■□□□□ 0.26
SDR39U1-220ENST00000556548 MOSPD2Q8NHP6 518 aa16.7■□□□□ 0.26
SDR39U1-220ENST00000556548 TRMT61AQ96FX7 289 aaKnown RBP16.7■□□□□ 0.26
SDR39U1-220ENST00000556548 SEMA4CQ9C0C4 833 aa16.7■□□□□ 0.26
SDR39U1-220ENST00000556548 SLIRPQ9GZT3 109 aaKnown RBP16.7■□□□□ 0.26
SDR39U1-220ENST00000556548 RACGAP1Q9H0H5 632 aa16.7■□□□□ 0.26
SDR39U1-220ENST00000556548 YARS2Q9Y2Z4 477 aaKnown RBP16.7■□□□□ 0.26
SDR39U1-220ENST00000556548 EXOSC1Q9Y3B2 195 aaKnown RBP16.7■□□□□ 0.26
SDR39U1-220ENST00000556548 IMPA2O14732 288 aa16.69■□□□□ 0.26
SDR39U1-220ENST00000556548 CDC40O60508 579 aaKnown RBP eCLIP16.69■□□□□ 0.26
SDR39U1-220ENST00000556548 ZNF3P17036 446 aa16.69■□□□□ 0.26
SDR39U1-220ENST00000556548 NAT1P18440 290 aa16.69■□□□□ 0.26
SDR39U1-220ENST00000556548 PAICSP22234 425 aaKnown RBP16.69■□□□□ 0.26
SDR39U1-220ENST00000556548 CLDN6P56747 220 aa16.69■□□□□ 0.26
SDR39U1-220ENST00000556548 MLLT11Q13015 90 aaPredicted RBP16.69■□□□□ 0.26
SDR39U1-220ENST00000556548 TMEM44Q2T9K0 475 aa16.69■□□□□ 0.26
SDR39U1-220ENST00000556548 GID4Q8IVV7 300 aa16.69■□□□□ 0.26
SDR39U1-220ENST00000556548 PHC2Q8IXK0 858 aa16.69■□□□□ 0.26
SDR39U1-220ENST00000556548 OR51L1Q8NGJ5 315 aa16.69■□□□□ 0.26
SDR39U1-220ENST00000556548 CHPT1Q8WUD6 406 aa16.69■□□□□ 0.26
SDR39U1-220ENST00000556548 MR1Q95460 341 aa16.69■□□□□ 0.26
SDR39U1-220ENST00000556548 KTI12Q96EK9 354 aaPredicted RBP16.69■□□□□ 0.26
SDR39U1-220ENST00000556548 ULBP3Q9BZM4 244 aa16.69■□□□□ 0.26
SDR39U1-220ENST00000556548 TPK1Q9H3S4 243 aa16.69■□□□□ 0.26
SDR39U1-220ENST00000556548 FN3KQ9H479 309 aa16.69■□□□□ 0.26
SDR39U1-220ENST00000556548 TOR4AQ9NXH8 423 aa16.69■□□□□ 0.26
SDR39U1-220ENST00000556548 EXOGQ9Y2C4 368 aaKnown RBP16.69■□□□□ 0.26
SDR39U1-220ENST00000556548 ZNF337Q9Y3M9 751 aa16.69■□□□□ 0.26
SDR39U1-220ENST00000556548 COL5A1P20908 1838 aaPredicted RBP16.69■□□□□ 0.26
SDR39U1-220ENST00000556548 LNP1A1A4G5 178 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms