RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 RPS6KA3P51812 740 aa8.34□□□□□ -1.07
ACTN1-218ENST00000556343 TPD52P55327 224 aaPredicted RBP8.34□□□□□ -1.07
ACTN1-218ENST00000556343 RAC1P63000 192 aa8.34□□□□□ -1.07
ACTN1-218ENST00000556343 PPP2R2BQ00005 443 aa8.34□□□□□ -1.07
ACTN1-218ENST00000556343 LAPTM4AQ15012 233 aa8.34□□□□□ -1.07
ACTN1-218ENST00000556343 SEC23BQ15437 767 aa8.34□□□□□ -1.07
ACTN1-218ENST00000556343 C1orf140Q5VVS0 124 aa8.34□□□□□ -1.07
ACTN1-218ENST00000556343 KDM4DQ6B0I6 523 aa8.34□□□□□ -1.07
ACTN1-218ENST00000556343 PGBD2Q6P3X8 592 aa8.34□□□□□ -1.07
ACTN1-218ENST00000556343 IZUMO2Q6UXV1 221 aa8.34□□□□□ -1.07
ACTN1-218ENST00000556343 MAMDC2Q7Z304 686 aaPredicted RBP8.34□□□□□ -1.07
ACTN1-218ENST00000556343 YRDCQ86U90 279 aaKnown RBP8.34□□□□□ -1.07
ACTN1-218ENST00000556343 OAFQ86UD1 273 aa8.34□□□□□ -1.07
ACTN1-218ENST00000556343 TSPYL5Q86VY4 417 aaPredicted RBP8.34□□□□□ -1.07
ACTN1-218ENST00000556343 HS3ST5Q8IZT8 346 aa8.34□□□□□ -1.07
ACTN1-218ENST00000556343 PARP8Q8N3A8 854 aa8.34□□□□□ -1.07
ACTN1-218ENST00000556343 DHRSXQ8N5I4 330 aa8.34□□□□□ -1.07
ACTN1-218ENST00000556343 TMEM251Q8N6I4 163 aa8.34□□□□□ -1.07
ACTN1-218ENST00000556343 FAM83FQ8NEG4 500 aaPredicted RBP8.34□□□□□ -1.07
ACTN1-218ENST00000556343 ATP6V1C2Q8NEY4 427 aa8.34□□□□□ -1.07
ACTN1-218ENST00000556343 OR9Q2Q8NGE9 314 aa8.34□□□□□ -1.07
ACTN1-218ENST00000556343 OR52L1Q8NGH7 329 aa8.34□□□□□ -1.07
ACTN1-218ENST00000556343 OSTF1Q92882 214 aa8.34□□□□□ -1.07
ACTN1-218ENST00000556343 GTPBP3Q969Y2 492 aaKnown RBP8.34□□□□□ -1.07
ACTN1-218ENST00000556343 ZHX1-C8orf76Q96EF9 292 aa8.34□□□□□ -1.07
ACTN1-218ENST00000556343 ZNF184Q99676 751 aaPredicted RBP8.34□□□□□ -1.07
ACTN1-218ENST00000556343 SLC29A1Q99808 456 aa8.34□□□□□ -1.07
ACTN1-218ENST00000556343 TACO1Q9BSH4 297 aaKnown RBP8.34□□□□□ -1.07
ACTN1-218ENST00000556343 ZNF426Q9BUY5 554 aa8.34□□□□□ -1.07
ACTN1-218ENST00000556343 ASPNQ9BXN1 380 aa8.34□□□□□ -1.07
ACTN1-218ENST00000556343 HES7Q9BYE0 225 aa8.34□□□□□ -1.07
ACTN1-218ENST00000556343 PRRG3Q9BZD7 231 aa8.34□□□□□ -1.07
ACTN1-218ENST00000556343 UBQLN3Q9H347 655 aa8.34□□□□□ -1.07
ACTN1-218ENST00000556343 FKRPQ9H9S5 495 aa8.34□□□□□ -1.07
ACTN1-218ENST00000556343 TIGARQ9NQ88 270 aa8.34□□□□□ -1.07
ACTN1-218ENST00000556343 NANSQ9NR45 359 aa8.34□□□□□ -1.07
ACTN1-218ENST00000556343 CORINQ9Y5Q5 1042 aa8.34□□□□□ -1.07
ACTN1-218ENST00000556343 FREM2Q5SZK8 3169 aa8.34□□□□□ -1.07
ACTN1-218ENST00000556343 DOCK10Q96BY6 2186 aa8.34□□□□□ -1.08
ACTN1-218ENST00000556343 MED13Q9UHV7 2174 aa8.34□□□□□ -1.08
ACTN1-218ENST00000556343 TRGV5A0A0B4J1U4 118 aa8.33□□□□□ -1.08
ACTN1-218ENST00000556343 A0A0G2JMM0 328 aa8.33□□□□□ -1.08
ACTN1-218ENST00000556343 A0A1W2PPB8 328 aa8.33□□□□□ -1.08
ACTN1-218ENST00000556343 A0A1W2PRS3 328 aa8.33□□□□□ -1.08
ACTN1-218ENST00000556343 OR2M5A3KFT3 312 aa8.33□□□□□ -1.08
ACTN1-218ENST00000556343 C17orf51A8MQB3 221 aa8.33□□□□□ -1.08
ACTN1-218ENST00000556343 KIR3DP1A8MWS1 328 aa8.33□□□□□ -1.08
ACTN1-218ENST00000556343 H0YAE9 185 aa8.33□□□□□ -1.08
ACTN1-218ENST00000556343 H3BN98 237 aa8.33□□□□□ -1.08
ACTN1-218ENST00000556343 HCN1O60741 890 aa8.33□□□□□ -1.08
ACTN1-218ENST00000556343 CH25HO95992 272 aa8.33□□□□□ -1.08
ACTN1-218ENST00000556343 ACTL6AO96019 429 aa8.33□□□□□ -1.08
ACTN1-218ENST00000556343 RFPL3SP0C7P2 107 aa8.33□□□□□ -1.08
ACTN1-218ENST00000556343 OSMP13725 252 aa8.33□□□□□ -1.08
ACTN1-218ENST00000556343 POU2F1P14859 743 aa8.33□□□□□ -1.08
ACTN1-218ENST00000556343 ZNF24P17028 368 aa8.33□□□□□ -1.08
ACTN1-218ENST00000556343 IDUAP35475 653 aa8.33□□□□□ -1.08
ACTN1-218ENST00000556343 GSSP48637 474 aa8.33□□□□□ -1.08
ACTN1-218ENST00000556343 PRPS1P60891 318 aa8.33□□□□□ -1.08
ACTN1-218ENST00000556343 RPS3AP61247 264 aaKnown RBP8.33□□□□□ -1.08
ACTN1-218ENST00000556343 CSNK2A1P68400 391 aaPredicted RBP8.33□□□□□ -1.08
ACTN1-218ENST00000556343 SLC35A1P78382 337 aa8.33□□□□□ -1.08
ACTN1-218ENST00000556343 NPRL3Q12980 569 aa8.33□□□□□ -1.08
ACTN1-218ENST00000556343 TMEM44Q2T9K0 475 aa8.33□□□□□ -1.08
ACTN1-218ENST00000556343 TMEM176BQ3YBM2 270 aaPredicted RBP8.33□□□□□ -1.08
ACTN1-218ENST00000556343 SYT14P1Q58G82 188 aa8.33□□□□□ -1.08
ACTN1-218ENST00000556343 WIPI1Q5MNZ9 446 aaPredicted RBP8.33□□□□□ -1.08
ACTN1-218ENST00000556343 FAM69AQ5T7M9 428 aa8.33□□□□□ -1.08
ACTN1-218ENST00000556343 ZNF770Q6IQ21 691 aaPredicted RBP8.33□□□□□ -1.08
ACTN1-218ENST00000556343 WDR88Q6ZMY6 472 aa8.33□□□□□ -1.08
ACTN1-218ENST00000556343 RASSF6Q6ZTQ3 369 aa8.33□□□□□ -1.08
ACTN1-218ENST00000556343 ZER1Q7Z7L7 766 aa8.33□□□□□ -1.08
ACTN1-218ENST00000556343 EPHX4Q8IUS5 362 aa8.33□□□□□ -1.08
ACTN1-218ENST00000556343 MEIOBQ8N635 442 aa8.33□□□□□ -1.08
ACTN1-218ENST00000556343 TEX19Q8NA77 164 aa8.33□□□□□ -1.08
ACTN1-218ENST00000556343 PFN4Q8NHR9 129 aa8.33□□□□□ -1.08
ACTN1-218ENST00000556343 MFSD8Q8NHS3 518 aa8.33□□□□□ -1.08
ACTN1-218ENST00000556343 TEX47Q8TBZ9 253 aa8.33□□□□□ -1.08
ACTN1-218ENST00000556343 POC1BQ8TC44 478 aa8.33□□□□□ -1.08
ACTN1-218ENST00000556343 LIPHQ8WWY8 451 aa8.33□□□□□ -1.08
ACTN1-218ENST00000556343 ABTB1Q969K4 478 aaPredicted RBP8.33□□□□□ -1.08
ACTN1-218ENST00000556343 PNPLA2Q96AD5 504 aa8.33□□□□□ -1.08
ACTN1-218ENST00000556343 FAM46AQ96IP4 442 aaKnown RBP8.33□□□□□ -1.08
ACTN1-218ENST00000556343 BARD1Q99728 777 aaKnown RBP8.33□□□□□ -1.08
ACTN1-218ENST00000556343 NAA11Q9BSU3 229 aaPredicted RBP8.33□□□□□ -1.08
ACTN1-218ENST00000556343 MFRPQ9BY79 579 aa8.33□□□□□ -1.08
ACTN1-218ENST00000556343 RIBC2Q9H4K1 309 aa8.33□□□□□ -1.08
ACTN1-218ENST00000556343 PRORYQ9H606 182 aa8.33□□□□□ -1.08
ACTN1-218ENST00000556343 ZNF703Q9H7S9 590 aaPredicted RBP8.33□□□□□ -1.08
ACTN1-218ENST00000556343 PAQR5Q9NXK6 330 aaPredicted RBP8.33□□□□□ -1.08
ACTN1-218ENST00000556343 ZNF229Q9UJW7 825 aa8.33□□□□□ -1.08
ACTN1-218ENST00000556343 RAB26Q9ULW5 256 aa8.33□□□□□ -1.08
ACTN1-218ENST00000556343 TRAPPC4Q9Y296 219 aa8.33□□□□□ -1.08
ACTN1-218ENST00000556343 TP53TG5Q9Y2B4 290 aa8.33□□□□□ -1.08
ACTN1-218ENST00000556343 MAGED1Q9Y5V3 778 aaPredicted RBP8.33□□□□□ -1.08
ACTN1-218ENST00000556343 PINLYPA6NC86 204 aa8.32□□□□□ -1.08
ACTN1-218ENST00000556343 ENO4A6NNW6 628 aa8.32□□□□□ -1.08
ACTN1-218ENST00000556343 DNPH1O43598 174 aa8.32□□□□□ -1.08
ACTN1-218ENST00000556343 EIF1BO60739 113 aaKnown RBP8.32□□□□□ -1.08
ACTN1-218ENST00000556343 POU3F2P20265 443 aaPredicted RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms