RNA–Protein interactions for RNA: ENST00000556093.1

TMEM55B-206, humanhuman

TSL 2

Gene TMEM55B, Length 277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-206ENST00000556093 ZNF226Q9NYT6 803 aa11.51□□□□□ -0.57
TMEM55B-206ENST00000556093 EMC3Q9P0I2 261 aa11.51□□□□□ -0.57
TMEM55B-206ENST00000556093 TMEM181Q9P2C4 612 aa11.51□□□□□ -0.57
TMEM55B-206ENST00000556093 ANGPT4Q9Y264 503 aa11.51□□□□□ -0.57
TMEM55B-206ENST00000556093 MAP1AP78559 2803 aaPredicted RBP11.51□□□□□ -0.57
TMEM55B-206ENST00000556093 PRR14LQ5THK1 2151 aa11.51□□□□□ -0.57
TMEM55B-206ENST00000556093 ROS1P08922 2347 aa11.51□□□□□ -0.57
TMEM55B-206ENST00000556093 HIVEP1P15822 2718 aa11.5□□□□□ -0.57
TMEM55B-206ENST00000556093 IGKV3D-15A0A087WSY6 115 aa11.5□□□□□ -0.57
TMEM55B-206ENST00000556093 ZNF724A8MTY0 619 aa11.5□□□□□ -0.57
TMEM55B-206ENST00000556093 PSMB1P20618 241 aaKnown RBP11.5□□□□□ -0.57
TMEM55B-206ENST00000556093 CRYGSP22914 178 aa11.5□□□□□ -0.57
TMEM55B-206ENST00000556093 DNAJA1P31689 397 aaKnown RBP11.5□□□□□ -0.57
TMEM55B-206ENST00000556093 PDK3Q15120 406 aa11.5□□□□□ -0.57
TMEM55B-206ENST00000556093 ADRM1Q16186 407 aa11.5□□□□□ -0.57
TMEM55B-206ENST00000556093 CYP51A1Q16850 503 aa11.5□□□□□ -0.57
TMEM55B-206ENST00000556093 TRMT5Q32P41 509 aaKnown RBP11.5□□□□□ -0.57
TMEM55B-206ENST00000556093 COQ5Q5HYK3 327 aa11.5□□□□□ -0.57
TMEM55B-206ENST00000556093 DHRS4L2Q6PKH6 230 aa11.5□□□□□ -0.57
TMEM55B-206ENST00000556093 GABRG1Q8N1C3 465 aa11.5□□□□□ -0.57
TMEM55B-206ENST00000556093 C11orf65Q8NCR3 313 aa11.5□□□□□ -0.57
TMEM55B-206ENST00000556093 HIPK4Q8NE63 616 aa11.5□□□□□ -0.57
TMEM55B-206ENST00000556093 NRGNQ92686 78 aa11.5□□□□□ -0.57
TMEM55B-206ENST00000556093 C3orf49Q96BT1 292 aa11.5□□□□□ -0.57
TMEM55B-206ENST00000556093 WFIKKN1Q96NZ8 548 aa11.5□□□□□ -0.57
TMEM55B-206ENST00000556093 ZNF300Q96RE9 604 aaPredicted RBP11.5□□□□□ -0.57
TMEM55B-206ENST00000556093 ZNF607Q96SK3 696 aa11.5□□□□□ -0.57
TMEM55B-206ENST00000556093 OR10A4Q9H209 315 aa11.5□□□□□ -0.57
TMEM55B-206ENST00000556093 KLHL14Q9P2G3 628 aa11.5□□□□□ -0.57
TMEM55B-206ENST00000556093 TRAPPC4Q9Y296 219 aa11.5□□□□□ -0.57
TMEM55B-206ENST00000556093 ITPR3Q14573 2671 aa11.49□□□□□ -0.57
TMEM55B-206ENST00000556093 ZC3H12DA2A288 527 aaKnown RBP11.49□□□□□ -0.57
TMEM55B-206ENST00000556093 PRORSD1PA6NEY8 169 aa11.49□□□□□ -0.57
TMEM55B-206ENST00000556093 ZNF716A6NP11 495 aa11.49□□□□□ -0.57
TMEM55B-206ENST00000556093 BBIP1A8MTZ0 92 aa11.49□□□□□ -0.57
TMEM55B-206ENST00000556093 FRS3O43559 492 aa11.49□□□□□ -0.57
TMEM55B-206ENST00000556093 EIF1BO60739 113 aaKnown RBP11.49□□□□□ -0.57
TMEM55B-206ENST00000556093 GCM2O75603 506 aaPredicted RBP11.49□□□□□ -0.57
TMEM55B-206ENST00000556093 CXCR1P25024 350 aa11.49□□□□□ -0.57
TMEM55B-206ENST00000556093 AQP1P29972 269 aa11.49□□□□□ -0.57
TMEM55B-206ENST00000556093 IDUAP35475 653 aa11.49□□□□□ -0.57
TMEM55B-206ENST00000556093 MDH1P40925 334 aaKnown RBP11.49□□□□□ -0.57
TMEM55B-206ENST00000556093 OR3A2P47893 321 aa11.49□□□□□ -0.57
TMEM55B-206ENST00000556093 SLC16A1P53985 500 aa11.49□□□□□ -0.57
TMEM55B-206ENST00000556093 OR2B6P58173 313 aa11.49□□□□□ -0.57
TMEM55B-206ENST00000556093 SLC35A1P78382 337 aa11.49□□□□□ -0.57
TMEM55B-206ENST00000556093 RBBP4Q09028 425 aa11.49□□□□□ -0.57
TMEM55B-206ENST00000556093 SELPLGQ14242 412 aa11.49□□□□□ -0.57
TMEM55B-206ENST00000556093 MAPRE2Q15555 327 aa11.49□□□□□ -0.57
TMEM55B-206ENST00000556093 NET1Q7Z628 596 aaPredicted RBP11.49□□□□□ -0.57
TMEM55B-206ENST00000556093 GALNT5Q7Z7M9 940 aa11.49□□□□□ -0.57
TMEM55B-206ENST00000556093 PTOV1Q86YD1 416 aa11.49□□□□□ -0.57
TMEM55B-206ENST00000556093 LURAP1LQ8IV03 231 aa11.49□□□□□ -0.57
TMEM55B-206ENST00000556093 BHLHE22Q8NFJ8 381 aaPredicted RBP11.49□□□□□ -0.57
TMEM55B-206ENST00000556093 NINJ1Q92982 152 aa11.49□□□□□ -0.57
TMEM55B-206ENST00000556093 DNAJA3Q96EY1 480 aa11.49□□□□□ -0.57
TMEM55B-206ENST00000556093 POTEKPQ9BYX7 375 aa11.49□□□□□ -0.57
TMEM55B-206ENST00000556093 SAR1AQ9NR31 198 aa11.49□□□□□ -0.57
TMEM55B-206ENST00000556093 EDARQ9UNE0 448 aa11.49□□□□□ -0.57
TMEM55B-206ENST00000556093 GPR52Q9Y2T5 361 aa11.49□□□□□ -0.57
TMEM55B-206ENST00000556093 A8MVM7 634 aa11.48□□□□□ -0.57
TMEM55B-206ENST00000556093 DEFB108AA8MXU0 73 aa11.48□□□□□ -0.57
TMEM55B-206ENST00000556093 TMEM229AB2RXF0 380 aa11.48□□□□□ -0.57
TMEM55B-206ENST00000556093 FXYD1O00168 92 aa11.48□□□□□ -0.57
TMEM55B-206ENST00000556093 FBP2O00757 339 aa11.48□□□□□ -0.57
TMEM55B-206ENST00000556093 GPR171O14626 319 aa11.48□□□□□ -0.57
TMEM55B-206ENST00000556093 SERPINB7O75635 380 aa11.48□□□□□ -0.57
TMEM55B-206ENST00000556093 IMPDH2P12268 514 aa11.48□□□□□ -0.57
TMEM55B-206ENST00000556093 PCBP3P57721 371 aaKnown RBP11.48□□□□□ -0.57
TMEM55B-206ENST00000556093 H3F3AP84243 136 aa11.48□□□□□ -0.57
TMEM55B-206ENST00000556093 HOXC5Q00444 222 aa11.48□□□□□ -0.57
TMEM55B-206ENST00000556093 SF3A3Q12874 501 aaKnown RBP eCLIP11.48□□□□□ -0.572e-7■□□□□ 10.4
TMEM55B-206ENST00000556093 KLF10Q13118 480 aa11.48□□□□□ -0.57
TMEM55B-206ENST00000556093 CAPRIN1Q14444 709 aaKnown RBP11.48□□□□□ -0.57
TMEM55B-206ENST00000556093 P2RY6Q15077 328 aa11.48□□□□□ -0.57
TMEM55B-206ENST00000556093 POU4F3Q15319 338 aa11.48□□□□□ -0.57
TMEM55B-206ENST00000556093 PAQR6Q6TCH4 344 aa11.48□□□□□ -0.57
TMEM55B-206ENST00000556093 PAMR1Q6UXH9 720 aa11.48□□□□□ -0.57
TMEM55B-206ENST00000556093 Q6ZT83 130 aa11.48□□□□□ -0.57
TMEM55B-206ENST00000556093 ATG4DQ86TL0 474 aaPredicted RBP11.48□□□□□ -0.57
TMEM55B-206ENST00000556093 COMTD1Q86VU5 262 aa11.48□□□□□ -0.57
TMEM55B-206ENST00000556093 LSRQ86X29 649 aaPredicted RBP11.48□□□□□ -0.57
TMEM55B-206ENST00000556093 CXorf67Q86X51 503 aaPredicted RBP11.48□□□□□ -0.57
TMEM55B-206ENST00000556093 ARMC8Q8IUR7 673 aa11.48□□□□□ -0.57
TMEM55B-206ENST00000556093 SLC30A8Q8IWU4 369 aa11.48□□□□□ -0.57
TMEM55B-206ENST00000556093 STEAP2Q8NFT2 490 aa11.48□□□□□ -0.57
TMEM55B-206ENST00000556093 C10orf82Q8WW14 230 aa11.48□□□□□ -0.57
TMEM55B-206ENST00000556093 ZC3HAV1LQ96H79 300 aaKnown RBP11.48□□□□□ -0.57
TMEM55B-206ENST00000556093 ZNF317Q96PQ6 595 aaPredicted RBP11.48□□□□□ -0.57
TMEM55B-206ENST00000556093 RSPO3Q9BXY4 272 aaPredicted RBP11.48□□□□□ -0.57
TMEM55B-206ENST00000556093 ACTR6Q9GZN1 396 aa11.48□□□□□ -0.57
TMEM55B-206ENST00000556093 KAT8Q9H7Z6 458 aaKnown RBP11.48□□□□□ -0.57
TMEM55B-206ENST00000556093 C6orf203Q9P0P8 240 aaPredicted RBP11.48□□□□□ -0.57
TMEM55B-206ENST00000556093 TESQ9UGI8 421 aaKnown RBP11.48□□□□□ -0.57
TMEM55B-206ENST00000556093 ST6GALNAC2Q9UJ37 374 aa11.48□□□□□ -0.57
TMEM55B-206ENST00000556093 ITGB1BP2Q9UKP3 347 aa11.48□□□□□ -0.57
TMEM55B-206ENST00000556093 CAPN7Q9Y6W3 813 aa11.48□□□□□ -0.57
TMEM55B-206ENST00000556093 PRRC2AP48634 2157 aaKnown RBP11.48□□□□□ -0.57
TMEM55B-206ENST00000556093 LIPT2A6NK58 231 aa11.47□□□□□ -0.57
TMEM55B-206ENST00000556093 ZNF814B7Z6K7 855 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms