RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 OR5J2Q8NH18 312 aa6.45□□□□□ -1.38
TDP1-213ENST00000555880 CCL4L1Q8NHW4 92 aa6.45□□□□□ -1.38
TDP1-213ENST00000555880 ZNF671Q8TAW3 534 aa6.45□□□□□ -1.38
TDP1-213ENST00000555880 BAHD1Q8TBE0 780 aaPredicted RBP6.45□□□□□ -1.38
TDP1-213ENST00000555880 C17orf50Q8WW18 174 aa6.45□□□□□ -1.38
TDP1-213ENST00000555880 THAP4Q8WY91 577 aa6.45□□□□□ -1.38
TDP1-213ENST00000555880 FAM3CQ92520 227 aa6.45□□□□□ -1.38
TDP1-213ENST00000555880 CNOT9Q92600 299 aaKnown RBP6.45□□□□□ -1.38
TDP1-213ENST00000555880 DACT3Q96B18 629 aaPredicted RBP6.45□□□□□ -1.38
TDP1-213ENST00000555880 MRPL38Q96DV4 380 aaKnown RBP6.45□□□□□ -1.38
TDP1-213ENST00000555880 SMIM19Q96E16 107 aa6.45□□□□□ -1.38
TDP1-213ENST00000555880 PGLYRP3Q96LB9 341 aa6.45□□□□□ -1.38
TDP1-213ENST00000555880 TNFRSF13CQ96RJ3 184 aa6.45□□□□□ -1.38
TDP1-213ENST00000555880 SLX1AQ9BQ83 275 aa6.45□□□□□ -1.38
TDP1-213ENST00000555880 PPIL3Q9H2H8 161 aaKnown RBP6.45□□□□□ -1.38
TDP1-213ENST00000555880 RANBP3Q9H6Z4 567 aaPredicted RBP6.45□□□□□ -1.38
TDP1-213ENST00000555880 EMC7Q9NPA0 242 aa6.45□□□□□ -1.38
TDP1-213ENST00000555880 MKKSQ9NPJ1 570 aaPredicted RBP6.45□□□□□ -1.38
TDP1-213ENST00000555880 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.45□□□□□ -1.38
TDP1-213ENST00000555880 AKAP7Q9P0M2 348 aaPredicted RBP6.45□□□□□ -1.38
TDP1-213ENST00000555880 CA5BQ9Y2D0 317 aa6.45□□□□□ -1.38
TDP1-213ENST00000555880 MRPS2Q9Y399 296 aaKnown RBP6.45□□□□□ -1.38
TDP1-213ENST00000555880 TICRRQ7Z2Z1 1910 aa6.45□□□□□ -1.38
TDP1-213ENST00000555880 C5orf42Q9H799 3197 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 F5P12259 2224 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 A0A0G2JK05 382 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 TRBV2A0A0J9YWF9 115 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 A6NCN8 305 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 PDCD5O14737 125 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 LANCL1O43813 399 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 GPRIN2O60269 458 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 RFPL3O75679 317 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 PPM1BO75688 479 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 SC5DO75845 299 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 GUSBP08236 651 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 ANXA3P12429 323 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 PVRP15151 417 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 IL9P15248 144 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 LORP23490 312 aaPredicted RBP6.44□□□□□ -1.38
TDP1-213ENST00000555880 AKT2P31751 481 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 RPL4P36578 427 aaKnown RBP6.44□□□□□ -1.38
TDP1-213ENST00000555880 MAP3K8P41279 467 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 MMP15P51511 669 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 AGFG1P52594 562 aaKnown RBP6.44□□□□□ -1.38
TDP1-213ENST00000555880 RAB38P57729 211 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 VSX2P58304 361 aaPredicted RBP6.44□□□□□ -1.38
TDP1-213ENST00000555880 SNRPNP63162 240 aaKnown RBP6.44□□□□□ -1.38
TDP1-213ENST00000555880 SIRPAP78324 504 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 MGAT2Q10469 447 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 CDK5R1Q15078 307 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 PON3Q15166 354 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 SLC25A35Q3KQZ1 300 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 UBE2NLQ5JXB2 153 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 SLC22A10Q63ZE4 541 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 ARMC6Q6NXE6 501 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 RPL22L1Q6P5R6 122 aaKnown RBP6.44□□□□□ -1.38
TDP1-213ENST00000555880 PARM1Q6UWI2 310 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 LYPD4Q6UWN0 246 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 KIAA1324Q6UXG2 1013 aaKnown RBP6.44□□□□□ -1.38
TDP1-213ENST00000555880 ZNF782Q6ZMW2 699 aaPredicted RBP6.44□□□□□ -1.38
TDP1-213ENST00000555880 RNF44Q7L0R7 432 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 PRSS41Q7RTY9 318 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 SLC35F2Q8IXU6 374 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 LSMEM1Q8N8F7 131 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 DTX3Q8N9I9 347 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 TMEM52Q8NDY8 209 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 OR4K13Q8NH42 304 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 PHYHIPQ92561 330 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 FGF14Q92915 247 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 SNAPC3Q92966 411 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 CTHRC1Q96CG8 243 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 ZMYND19Q96E35 227 aaPredicted RBP6.44□□□□□ -1.38
TDP1-213ENST00000555880 SGTBQ96EQ0 304 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 ZFP3Q96NJ6 502 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 PTCHD1Q96NR3 888 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 OR2M2Q96R28 347 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 ABHD1Q96SE0 405 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 SMAD5Q99717 465 aaKnown RBP6.44□□□□□ -1.38
TDP1-213ENST00000555880 G6PC3Q9BUM1 346 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 ACTR6Q9GZN1 396 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 IRF2BPLQ9H1B7 796 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 IL21RQ9HBE5 538 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 MCCC2Q9HCC0 563 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 POT1Q9NUX5 634 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 HRASLS2Q9NWW9 162 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 DNAJB12Q9NXW2 375 aaKnown RBP6.44□□□□□ -1.38
TDP1-213ENST00000555880 PTTG3PQ9NZH4 202 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 FLRT3Q9NZU0 649 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 CPNE7Q9UBL6 633 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 ST6GALNAC2Q9UJ37 374 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 SERTAD3Q9UJW9 196 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 GNG8Q9UK08 70 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 ZNF222Q9UK12 451 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 CLEC4AQ9UMR7 237 aa6.44□□□□□ -1.38
TDP1-213ENST00000555880 MRPS33Q9Y291 106 aaKnown RBP6.44□□□□□ -1.38
TDP1-213ENST00000555880 MRPS7Q9Y2R9 242 aaKnown RBP6.44□□□□□ -1.38
TDP1-213ENST00000555880 TEX13CA0A0J9YWL9 993 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 A0A1B0GVC2 190 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 A0A1W2PQF6 199 aa6.43□□□□□ -1.38
TDP1-213ENST00000555880 C7orf66A4D0T2 115 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms