RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 CD74P04233 296 aa8.84□□□□□ -0.99
SIX4-202ENST00000554079 PIRTP0C851 137 aa8.84□□□□□ -0.99
SIX4-202ENST00000554079 EPORP19235 508 aa8.84□□□□□ -0.99
SIX4-202ENST00000554079 RGS19P49795 217 aa8.84□□□□□ -0.99
SIX4-202ENST00000554079 GLO1Q04760 184 aa8.84□□□□□ -0.99
SIX4-202ENST00000554079 COL13A1Q5TAT6 717 aaPredicted RBP8.84□□□□□ -0.99
SIX4-202ENST00000554079 ARHGAP40Q5TG30 622 aa8.84□□□□□ -0.99
SIX4-202ENST00000554079 PSAPL1Q6NUJ1 521 aa8.84□□□□□ -0.99
SIX4-202ENST00000554079 CD300LDQ6UXZ3 194 aa8.84□□□□□ -0.99
SIX4-202ENST00000554079 PAQR9Q6ZVX9 377 aa8.84□□□□□ -0.99
SIX4-202ENST00000554079 BHLHA9Q7RTU4 235 aa8.84□□□□□ -0.99
SIX4-202ENST00000554079 PXKQ7Z7A4 578 aa8.84□□□□□ -0.99
SIX4-202ENST00000554079 NPAS3Q8IXF0 933 aa8.84□□□□□ -0.99
SIX4-202ENST00000554079 CMTM4Q8IZR5 234 aa8.84□□□□□ -0.99
SIX4-202ENST00000554079 OR5D16Q8NGK9 328 aa8.84□□□□□ -0.99
SIX4-202ENST00000554079 OR5R1Q8NH85 324 aa8.84□□□□□ -0.99
SIX4-202ENST00000554079 BRIX1Q8TDN6 353 aaKnown RBP8.84□□□□□ -0.99
SIX4-202ENST00000554079 LCN9Q8WX39 176 aa8.84□□□□□ -0.99
SIX4-202ENST00000554079 TM4SF18Q96CE8 201 aa8.84□□□□□ -0.99
SIX4-202ENST00000554079 ZNF385AQ96PM9 386 aaKnown RBP8.84□□□□□ -0.99
SIX4-202ENST00000554079 RPS10P5Q9NQ39 176 aa8.84□□□□□ -0.99
SIX4-202ENST00000554079 FAM212BQ9NTI7 297 aaPredicted RBP8.84□□□□□ -0.99
SIX4-202ENST00000554079 KLHL9Q9P2J3 617 aa8.84□□□□□ -0.99
SIX4-202ENST00000554079 MRPL42Q9Y6G3 142 aaKnown RBP8.84□□□□□ -0.99
SIX4-202ENST00000554079 ZBTB42B2RXF5 422 aa8.83□□□□□ -1
SIX4-202ENST00000554079 FGF10O15520 208 aaPredicted RBP8.83□□□□□ -1
SIX4-202ENST00000554079 REM1O75628 298 aa8.83□□□□□ -1
SIX4-202ENST00000554079 GLCEO94923 617 aa8.83□□□□□ -1
SIX4-202ENST00000554079 IFNA17P01571 189 aa8.83□□□□□ -1
SIX4-202ENST00000554079 FGF1P05230 155 aa8.83□□□□□ -1
SIX4-202ENST00000554079 NPSP0C0P6 89 aa8.83□□□□□ -1
SIX4-202ENST00000554079 MPIP34949 423 aa8.83□□□□□ -1
SIX4-202ENST00000554079 CASRP41180 1078 aa8.83□□□□□ -1
SIX4-202ENST00000554079 CD200P41217 278 aa8.83□□□□□ -1
SIX4-202ENST00000554079 STXBP1P61764 594 aaKnown RBP8.83□□□□□ -1
SIX4-202ENST00000554079 KIAA0141Q14154 515 aaPredicted RBP8.83□□□□□ -1
SIX4-202ENST00000554079 GRB14Q14449 540 aa8.83□□□□□ -1
SIX4-202ENST00000554079 RPE65Q16518 533 aa8.83□□□□□ -1
SIX4-202ENST00000554079 UBE2NLQ5JXB2 153 aa8.83□□□□□ -1
SIX4-202ENST00000554079 ZNF385CQ66K41 422 aaPredicted RBP8.83□□□□□ -1
SIX4-202ENST00000554079 ADAM5Q6NVV9 412 aa8.83□□□□□ -1
SIX4-202ENST00000554079 CLEC20AQ6ZU45 233 aa8.83□□□□□ -1
SIX4-202ENST00000554079 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.83□□□□□ -1
SIX4-202ENST00000554079 SYT12Q8IV01 421 aa8.83□□□□□ -1
SIX4-202ENST00000554079 OR4K2Q8NGD2 314 aa8.83□□□□□ -1
SIX4-202ENST00000554079 OR56B1Q8NGI3 324 aa8.83□□□□□ -1
SIX4-202ENST00000554079 NUBPLQ8TB37 319 aa8.83□□□□□ -1
SIX4-202ENST00000554079 CSGALNACT1Q8TDX6 532 aa8.83□□□□□ -1
SIX4-202ENST00000554079 NUDCD2Q8WVJ2 157 aa8.83□□□□□ -1
SIX4-202ENST00000554079 MVB12AQ96EY5 273 aa8.83□□□□□ -1
SIX4-202ENST00000554079 ZNF558Q96NG5 402 aa8.83□□□□□ -1
SIX4-202ENST00000554079 TIMP4Q99727 224 aa8.83□□□□□ -1
SIX4-202ENST00000554079 TEX12Q9BXU0 123 aa8.83□□□□□ -1
SIX4-202ENST00000554079 UBQLN3Q9H347 655 aa8.83□□□□□ -1
SIX4-202ENST00000554079 TMEM38AQ9H6F2 299 aa8.83□□□□□ -1
SIX4-202ENST00000554079 ISG20L2Q9H9L3 353 aaKnown RBP8.83□□□□□ -1
SIX4-202ENST00000554079 CERS4Q9HA82 394 aa8.83□□□□□ -1
SIX4-202ENST00000554079 RHOFQ9HBH0 211 aa8.83□□□□□ -1
SIX4-202ENST00000554079 TMEM248Q9NWD8 314 aa8.83□□□□□ -1
SIX4-202ENST00000554079 WWOXQ9NZC7 414 aa8.83□□□□□ -1
SIX4-202ENST00000554079 KLK11Q9UBX7 282 aa8.83□□□□□ -1
SIX4-202ENST00000554079 ZNF230Q9UIE0 474 aaPredicted RBP8.83□□□□□ -1
SIX4-202ENST00000554079 GPR52Q9Y2T5 361 aa8.83□□□□□ -1
SIX4-202ENST00000554079 OARD1Q9Y530 152 aa8.83□□□□□ -1
SIX4-202ENST00000554079 NUP210LQ5VU65 1888 aa8.83□□□□□ -1
SIX4-202ENST00000554079 CCDC187A0A096LP49 1063 aa8.83□□□□□ -1
SIX4-202ENST00000554079 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.83□□□□□ -1
SIX4-202ENST00000554079 GGT3PA6NGU5 568 aa8.83□□□□□ -1
SIX4-202ENST00000554079 ZNF726A6NNF4 738 aa8.83□□□□□ -1
SIX4-202ENST00000554079 UPK3BL1B0FP48 263 aa8.83□□□□□ -1
SIX4-202ENST00000554079 SEC14L6B5MCN3 397 aa8.83□□□□□ -1
SIX4-202ENST00000554079 C9JQL5 133 aa8.83□□□□□ -1
SIX4-202ENST00000554079 UPK3BL2E5RIL1 263 aa8.83□□□□□ -1
SIX4-202ENST00000554079 FOXE1O00358 373 aaPredicted RBP8.83□□□□□ -1
SIX4-202ENST00000554079 MFNGO00587 321 aa8.83□□□□□ -1
SIX4-202ENST00000554079 CLDN9O95484 217 aa8.83□□□□□ -1
SIX4-202ENST00000554079 CD5P06127 495 aa8.83□□□□□ -1
SIX4-202ENST00000554079 MPZP25189 248 aa8.83□□□□□ -1
SIX4-202ENST00000554079 MAT2AP31153 395 aaKnown RBP8.83□□□□□ -1
SIX4-202ENST00000554079 DCTDP32321 178 aa8.83□□□□□ -1
SIX4-202ENST00000554079 DLSTP36957 453 aa8.83□□□□□ -1
SIX4-202ENST00000554079 ADH7P40394 386 aa8.83□□□□□ -1
SIX4-202ENST00000554079 MAP3K8P41279 467 aa8.83□□□□□ -1
SIX4-202ENST00000554079 GPR3P46089 330 aa8.83□□□□□ -1
SIX4-202ENST00000554079 CAV2P51636 162 aa8.83□□□□□ -1
SIX4-202ENST00000554079 SRSF4Q08170 494 aaKnown RBP8.83□□□□□ -1
SIX4-202ENST00000554079 SLC10A7Q0GE19 358 aa8.83□□□□□ -1
SIX4-202ENST00000554079 TMEM115Q12893 351 aaPredicted RBP8.83□□□□□ -1
SIX4-202ENST00000554079 ZNF177Q13360 481 aaPredicted RBP8.83□□□□□ -1
SIX4-202ENST00000554079 HNF4GQ14541 408 aa8.83□□□□□ -1
SIX4-202ENST00000554079 CPSF6Q16630 551 aaKnown RBP eCLIP8.83□□□□□ -1
SIX4-202ENST00000554079 CRY2Q49AN0 593 aa8.83□□□□□ -1
SIX4-202ENST00000554079 BEX5Q5H9J7 111 aa8.83□□□□□ -1
SIX4-202ENST00000554079 DACT2Q5SW24 774 aa8.83□□□□□ -1
SIX4-202ENST00000554079 ACOT7LQ6ZUV0 252 aa8.83□□□□□ -1
SIX4-202ENST00000554079 ARMCX2Q7L311 632 aa8.83□□□□□ -1
SIX4-202ENST00000554079 C5orf24Q7Z6I8 188 aa8.83□□□□□ -1
SIX4-202ENST00000554079 RANBP3LQ86VV4 465 aaPredicted RBP8.83□□□□□ -1
SIX4-202ENST00000554079 ZNF227Q86WZ6 799 aa8.83□□□□□ -1
SIX4-202ENST00000554079 LRRC56Q8IYG6 542 aaPredicted RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms