RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 UBTFL6P0CB48 400 aaPredicted RBP10.45□□□□□ -0.74
SRP54-203ENST00000553544 ZCCHC18P0CG32 403 aa10.45□□□□□ -0.74
SRP54-203ENST00000553544 MAGEA8P43361 318 aa10.45□□□□□ -0.74
SRP54-203ENST00000553544 MRPL19P49406 292 aaKnown RBP10.45□□□□□ -0.74
SRP54-203ENST00000553544 SESN3P58005 492 aa10.45□□□□□ -0.74
SRP54-203ENST00000553544 KCNJ10P78508 379 aa10.45□□□□□ -0.74
SRP54-203ENST00000553544 RUNX1T1Q06455 604 aa10.45□□□□□ -0.74
SRP54-203ENST00000553544 BSPH1Q075Z2 132 aa10.45□□□□□ -0.74
SRP54-203ENST00000553544 SELENBP1Q13228 472 aa10.45□□□□□ -0.74
SRP54-203ENST00000553544 P2RY6Q15077 328 aa10.45□□□□□ -0.74
SRP54-203ENST00000553544 MAPK11Q15759 364 aa10.45□□□□□ -0.74
SRP54-203ENST00000553544 SYPL1Q16563 259 aa10.45□□□□□ -0.74
SRP54-203ENST00000553544 TMEM176BQ3YBM2 270 aaPredicted RBP10.45□□□□□ -0.74
SRP54-203ENST00000553544 TIGD2Q4W5G0 525 aa10.45□□□□□ -0.74
SRP54-203ENST00000553544 COX20Q5RI15 118 aa10.45□□□□□ -0.74
SRP54-203ENST00000553544 TMEM201Q5SNT2 666 aa10.45□□□□□ -0.74
SRP54-203ENST00000553544 AGAP6Q5VW22 663 aa10.45□□□□□ -0.74
SRP54-203ENST00000553544 CLEC2AQ6UVW9 174 aa10.45□□□□□ -0.74
SRP54-203ENST00000553544 LRRC74BQ6ZQY2 392 aa10.45□□□□□ -0.74
SRP54-203ENST00000553544 MSANTD1Q6ZTZ1 278 aa10.45□□□□□ -0.74
SRP54-203ENST00000553544 DTX2Q86UW9 622 aa10.45□□□□□ -0.74
SRP54-203ENST00000553544 GABRG1Q8N1C3 465 aa10.45□□□□□ -0.74
SRP54-203ENST00000553544 TMCO5AQ8N6Q1 288 aa10.45□□□□□ -0.74
SRP54-203ENST00000553544 ROBO4Q8WZ75 1007 aa10.45□□□□□ -0.74
SRP54-203ENST00000553544 KISS1RQ969F8 398 aaPredicted RBP10.45□□□□□ -0.74
SRP54-203ENST00000553544 REXO5Q96IC2 774 aaKnown RBP10.45□□□□□ -0.74
SRP54-203ENST00000553544 TRNT1Q96Q11 434 aaKnown RBP10.45□□□□□ -0.74
SRP54-203ENST00000553544 TRIM2Q9C040 744 aa10.45□□□□□ -0.74
SRP54-203ENST00000553544 GP6Q9HCN6 339 aa10.45□□□□□ -0.74
SRP54-203ENST00000553544 TIGARQ9NQ88 270 aa10.45□□□□□ -0.74
SRP54-203ENST00000553544 EXOSC3Q9NQT5 275 aaKnown RBP10.45□□□□□ -0.74
SRP54-203ENST00000553544 SLC6A13Q9NSD5 602 aa10.45□□□□□ -0.74
SRP54-203ENST00000553544 ACER3Q9NUN7 267 aa10.45□□□□□ -0.74
SRP54-203ENST00000553544 CADP27708 2225 aa10.44□□□□□ -0.74
SRP54-203ENST00000553544 ELOA3DA6NLF2 546 aaPredicted RBP10.44□□□□□ -0.74
SRP54-203ENST00000553544 CLDN24A6NM45 220 aa10.44□□□□□ -0.74
SRP54-203ENST00000553544 RFXANKO14593 260 aa10.44□□□□□ -0.74
SRP54-203ENST00000553544 LMX1BO60663 402 aa10.44□□□□□ -0.74
SRP54-203ENST00000553544 GCM2O75603 506 aaPredicted RBP10.44□□□□□ -0.74
SRP54-203ENST00000553544 CYP7B1O75881 506 aa10.44□□□□□ -0.74
SRP54-203ENST00000553544 SASH3O75995 380 aa10.44□□□□□ -0.74
SRP54-203ENST00000553544 ADAP00813 363 aa10.44□□□□□ -0.74
SRP54-203ENST00000553544 CHRM4P08173 479 aa10.44□□□□□ -0.74
SRP54-203ENST00000553544 SLC25A16P16260 332 aa10.44□□□□□ -0.74
SRP54-203ENST00000553544 SRD5A1P18405 259 aa10.44□□□□□ -0.74
SRP54-203ENST00000553544 PGCP20142 388 aa10.44□□□□□ -0.74
SRP54-203ENST00000553544 RPS4Y1P22090 263 aaKnown RBP10.44□□□□□ -0.74
SRP54-203ENST00000553544 AGTR1P30556 359 aa10.44□□□□□ -0.74
SRP54-203ENST00000553544 CCR4P51679 360 aa10.44□□□□□ -0.74
SRP54-203ENST00000553544 RAC3P60763 192 aa10.44□□□□□ -0.74
SRP54-203ENST00000553544 STX1BP61266 288 aa10.44□□□□□ -0.74
SRP54-203ENST00000553544 RAB35Q15286 201 aa10.44□□□□□ -0.74
SRP54-203ENST00000553544 TSC22D1Q15714 1073 aa10.44□□□□□ -0.74
SRP54-203ENST00000553544 ELOA3BQ3SY89 546 aa10.44□□□□□ -0.74
SRP54-203ENST00000553544 GPAT3Q53EU6 434 aa10.44□□□□□ -0.74
SRP54-203ENST00000553544 LIPNQ5VXI9 398 aa10.44□□□□□ -0.74
SRP54-203ENST00000553544 C3orf33Q6P1S2 294 aa10.44□□□□□ -0.74
SRP54-203ENST00000553544 ANKFN1Q8N957 763 aa10.44□□□□□ -0.74
SRP54-203ENST00000553544 KBTBD8Q8NFY9 601 aa10.44□□□□□ -0.74
SRP54-203ENST00000553544 ELOA3Q8NG57 546 aa10.44□□□□□ -0.74
SRP54-203ENST00000553544 OR9I1Q8NGQ6 314 aa10.44□□□□□ -0.74
SRP54-203ENST00000553544 ABHD3Q8WU67 409 aa10.44□□□□□ -0.74
SRP54-203ENST00000553544 STON2Q8WXE9 905 aa10.44□□□□□ -0.74
SRP54-203ENST00000553544 TMEM234Q8WY98 164 aa10.44□□□□□ -0.74
SRP54-203ENST00000553544 PMM1Q92871 262 aa10.44□□□□□ -0.74
SRP54-203ENST00000553544 QRSL1Q9H0R6 528 aaKnown RBP10.44□□□□□ -0.74
SRP54-203ENST00000553544 SLCO1B3Q9NPD5 702 aa10.44□□□□□ -0.74
SRP54-203ENST00000553544 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.44□□□□□ -0.74
SRP54-203ENST00000553544 ING1Q9UK53 422 aaPredicted RBP10.44□□□□□ -0.74
SRP54-203ENST00000553544 A0A096LNT2 108 aa10.43□□□□□ -0.74
SRP54-203ENST00000553544 A0A1W2PNR3 127 aa10.43□□□□□ -0.74
SRP54-203ENST00000553544 AGAP5A6NIR3 686 aa10.43□□□□□ -0.74
SRP54-203ENST00000553544 RAMP1O60894 148 aa10.43□□□□□ -0.74
SRP54-203ENST00000553544 KRT75O95678 551 aa10.43□□□□□ -0.74
SRP54-203ENST00000553544 ENPP1P22413 925 aa10.43□□□□□ -0.74
SRP54-203ENST00000553544 APOBEC1P41238 236 aaKnown RBP10.43□□□□□ -0.74
SRP54-203ENST00000553544 ANXA11P50995 505 aaKnown RBP10.43□□□□□ -0.74
SRP54-203ENST00000553544 POLR2JP52435 117 aaKnown RBP10.43□□□□□ -0.74
SRP54-203ENST00000553544 ITGADQ13349 1161 aa10.43□□□□□ -0.74
SRP54-203ENST00000553544 RNPS1Q15287 305 aaKnown RBP10.43□□□□□ -0.74
SRP54-203ENST00000553544 FCRLAQ7L513 359 aa10.43□□□□□ -0.74
SRP54-203ENST00000553544 CMIPQ8IY22 773 aa10.43□□□□□ -0.74
SRP54-203ENST00000553544 MIER2Q8N344 545 aa10.43□□□□□ -0.74
SRP54-203ENST00000553544 SLC43A2Q8N370 569 aa10.43□□□□□ -0.74
SRP54-203ENST00000553544 ATP6V1C2Q8NEY4 427 aa10.43□□□□□ -0.74
SRP54-203ENST00000553544 CKAP2Q8WWK9 683 aa10.43□□□□□ -0.74
SRP54-203ENST00000553544 CNOT9Q92600 299 aaKnown RBP10.43□□□□□ -0.74
SRP54-203ENST00000553544 GTF2H4Q92759 462 aa10.43□□□□□ -0.74
SRP54-203ENST00000553544 MUCL1Q96DR8 90 aa10.43□□□□□ -0.74
SRP54-203ENST00000553544 RADILQ96JH8 1075 aa10.43□□□□□ -0.74
SRP54-203ENST00000553544 EBF4Q9BQW3 602 aa10.43□□□□□ -0.74
SRP54-203ENST00000553544 CCDC106Q9BWC9 280 aa10.43□□□□□ -0.74
SRP54-203ENST00000553544 MTHFD2LQ9H903 347 aaPredicted RBP10.43□□□□□ -0.74
SRP54-203ENST00000553544 TPT1P8Q9HAU6 139 aa10.43□□□□□ -0.74
SRP54-203ENST00000553544 KLHL13Q9P2N7 655 aa10.43□□□□□ -0.74
SRP54-203ENST00000553544 DSPPQ9NZW4 1301 aa10.42□□□□□ -0.74
SRP54-203ENST00000553544 PRKD3O94806 890 aa10.42□□□□□ -0.74
SRP54-203ENST00000553544 TFPTP0C1Z6 253 aa10.42□□□□□ -0.74
SRP54-203ENST00000553544 HOXB9P17482 250 aaPredicted RBP10.42□□□□□ -0.74
SRP54-203ENST00000553544 PTNP21246 168 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms