RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 HOXC5Q00444 222 aa10.48□□□□□ -0.73
TRAFD1-209ENST00000552896 LIPEQ05469 1076 aa10.48□□□□□ -0.73
TRAFD1-209ENST00000552896 FOXF2Q12947 444 aa10.48□□□□□ -0.73
TRAFD1-209ENST00000552896 MYBPHQ13203 477 aa10.48□□□□□ -0.73
TRAFD1-209ENST00000552896 KRT72Q14CN4 511 aa10.48□□□□□ -0.73
TRAFD1-209ENST00000552896 RNPS1Q15287 305 aaKnown RBP10.48□□□□□ -0.73
TRAFD1-209ENST00000552896 DUSP7Q16829 419 aa10.48□□□□□ -0.73
TRAFD1-209ENST00000552896 SWT1Q5T5J6 900 aaKnown RBP10.48□□□□□ -0.73
TRAFD1-209ENST00000552896 ABLIM2Q6H8Q1 611 aa10.48□□□□□ -0.73
TRAFD1-209ENST00000552896 PPP4R4Q6NUP7 873 aa10.48□□□□□ -0.73
TRAFD1-209ENST00000552896 SLC43A2Q8N370 569 aa10.48□□□□□ -0.73
TRAFD1-209ENST00000552896 FITM2Q8N6M3 262 aa10.48□□□□□ -0.73
TRAFD1-209ENST00000552896 SLC26A7Q8TE54 656 aa10.48□□□□□ -0.73
TRAFD1-209ENST00000552896 DNAJA4Q8WW22 397 aaPredicted RBP10.48□□□□□ -0.73
TRAFD1-209ENST00000552896 LRRC46Q96FV0 321 aa10.48□□□□□ -0.73
TRAFD1-209ENST00000552896 ZNF559Q9BR84 538 aa10.48□□□□□ -0.73
TRAFD1-209ENST00000552896 PRRG4Q9BZD6 226 aa10.48□□□□□ -0.73
TRAFD1-209ENST00000552896 UCK2Q9BZX2 261 aa10.48□□□□□ -0.73
TRAFD1-209ENST00000552896 TRIM2Q9C040 744 aa10.48□□□□□ -0.73
TRAFD1-209ENST00000552896 OR11A1Q9GZK7 315 aa10.48□□□□□ -0.73
TRAFD1-209ENST00000552896 GP6Q9HCN6 339 aa10.48□□□□□ -0.73
TRAFD1-209ENST00000552896 NPDC1Q9NQX5 325 aaPredicted RBP10.48□□□□□ -0.73
TRAFD1-209ENST00000552896 NDE1Q9NXR1 346 aa10.48□□□□□ -0.73
TRAFD1-209ENST00000552896 JKAMPQ9P055 326 aa10.48□□□□□ -0.73
TRAFD1-209ENST00000552896 RPS6KB2Q9UBS0 482 aa10.48□□□□□ -0.73
TRAFD1-209ENST00000552896 PACSIN3Q9UKS6 424 aa10.48□□□□□ -0.73
TRAFD1-209ENST00000552896 A0A1B0GWA3 101 aa10.47□□□□□ -0.73
TRAFD1-209ENST00000552896 M0R3H8 397 aa10.47□□□□□ -0.73
TRAFD1-209ENST00000552896 SULT2B1O00204 365 aa10.47□□□□□ -0.73
TRAFD1-209ENST00000552896 PLGP00747 810 aaPredicted RBP10.47□□□□□ -0.73
TRAFD1-209ENST00000552896 FESP07332 822 aa10.47□□□□□ -0.73
TRAFD1-209ENST00000552896 TFPIP10646 304 aa10.47□□□□□ -0.73
TRAFD1-209ENST00000552896 IGFBP2P18065 325 aa10.47□□□□□ -0.73
TRAFD1-209ENST00000552896 GSK3BP49841 420 aa10.47□□□□□ -0.73
TRAFD1-209ENST00000552896 MNAT1P51948 309 aa10.47□□□□□ -0.73
TRAFD1-209ENST00000552896 LRRC23Q53EV4 343 aaPredicted RBP10.47□□□□□ -0.73
TRAFD1-209ENST00000552896 GTF2IRD2BQ6EKJ0 949 aa10.47□□□□□ -0.73
TRAFD1-209ENST00000552896 TMPPEQ6ZT21 453 aa10.47□□□□□ -0.73
TRAFD1-209ENST00000552896 FCRLAQ7L513 359 aa10.47□□□□□ -0.73
TRAFD1-209ENST00000552896 FAM214BQ7L5A3 538 aa10.47□□□□□ -0.73
TRAFD1-209ENST00000552896 GTF2IRD2Q86UP8 949 aa10.47□□□□□ -0.73
TRAFD1-209ENST00000552896 PGAM4Q8N0Y7 254 aa10.47□□□□□ -0.73
TRAFD1-209ENST00000552896 CNEP1R1Q8N9A8 125 aa10.47□□□□□ -0.73
TRAFD1-209ENST00000552896 OR52E4Q8NGH9 312 aa10.47□□□□□ -0.73
TRAFD1-209ENST00000552896 OR6K3Q8NGY3 331 aa10.47□□□□□ -0.73
TRAFD1-209ENST00000552896 PROX1Q92786 737 aa10.47□□□□□ -0.73
TRAFD1-209ENST00000552896 ZHX1-C8orf76Q96EF9 292 aa10.47□□□□□ -0.73
TRAFD1-209ENST00000552896 ARL5BQ96KC2 179 aa10.47□□□□□ -0.73
TRAFD1-209ENST00000552896 KCTD14Q9BQ13 255 aaPredicted RBP10.47□□□□□ -0.73
TRAFD1-209ENST00000552896 TACO1Q9BSH4 297 aaKnown RBP10.47□□□□□ -0.73
TRAFD1-209ENST00000552896 PCDHAC1Q9H158 963 aa10.47□□□□□ -0.73
TRAFD1-209ENST00000552896 TMEM181Q9P2C4 612 aa10.47□□□□□ -0.73
TRAFD1-209ENST00000552896 KLHL9Q9P2J3 617 aa10.47□□□□□ -0.73
TRAFD1-209ENST00000552896 KLHL13Q9P2N7 655 aa10.47□□□□□ -0.73
TRAFD1-209ENST00000552896 FOXD3Q9UJU5 478 aaPredicted RBP10.47□□□□□ -0.73
TRAFD1-209ENST00000552896 BAG5Q9UL15 447 aa10.47□□□□□ -0.73
TRAFD1-209ENST00000552896 TRAPPC4Q9Y296 219 aa10.47□□□□□ -0.73
TRAFD1-209ENST00000552896 SLC9A8Q9Y2E8 581 aa10.47□□□□□ -0.73
TRAFD1-209ENST00000552896 EMC9Q9Y3B6 208 aa10.47□□□□□ -0.73
TRAFD1-209ENST00000552896 ITPR2Q14571 2701 aa10.47□□□□□ -0.73
TRAFD1-209ENST00000552896 A0A0B4J2E0 115 aa10.46□□□□□ -0.73
TRAFD1-209ENST00000552896 A0A1B0GX12 115 aa10.46□□□□□ -0.73
TRAFD1-209ENST00000552896 ZC3H12DA2A288 527 aaKnown RBP10.46□□□□□ -0.73
TRAFD1-209ENST00000552896 ELOA3DA6NLF2 546 aaPredicted RBP10.46□□□□□ -0.73
TRAFD1-209ENST00000552896 A8MVM7 634 aa10.46□□□□□ -0.73
TRAFD1-209ENST00000552896 C19orf84I3L1E1 186 aa10.46□□□□□ -0.73
TRAFD1-209ENST00000552896 MSTNO14793 375 aa10.46□□□□□ -0.73
TRAFD1-209ENST00000552896 SMAD9O15198 467 aaKnown RBP10.46□□□□□ -0.73
TRAFD1-209ENST00000552896 CYTIPO60759 359 aa10.46□□□□□ -0.73
TRAFD1-209ENST00000552896 PNMTP11086 282 aa10.46□□□□□ -0.73
TRAFD1-209ENST00000552896 ENPP1P22413 925 aa10.46□□□□□ -0.73
TRAFD1-209ENST00000552896 AGTR1P30556 359 aa10.46□□□□□ -0.73
TRAFD1-209ENST00000552896 KDELR2P33947 212 aa10.46□□□□□ -0.73
TRAFD1-209ENST00000552896 IDUAP35475 653 aa10.46□□□□□ -0.73
TRAFD1-209ENST00000552896 PEX19P40855 299 aa10.46□□□□□ -0.73
TRAFD1-209ENST00000552896 KIR2DL2P43627 348 aaPredicted RBP10.46□□□□□ -0.73
TRAFD1-209ENST00000552896 CTBP2P56545 445 aa10.46□□□□□ -0.73
TRAFD1-209ENST00000552896 SIRPAP78324 504 aa10.46□□□□□ -0.73
TRAFD1-209ENST00000552896 NPTX1Q15818 432 aa10.46□□□□□ -0.73
TRAFD1-209ENST00000552896 ELOA3BQ3SY89 546 aa10.46□□□□□ -0.73
TRAFD1-209ENST00000552896 CYBRD1Q53TN4 286 aa10.46□□□□□ -0.73
TRAFD1-209ENST00000552896 ALG10BQ5I7T1 473 aa10.46□□□□□ -0.73
TRAFD1-209ENST00000552896 VWA1Q6PCB0 445 aa10.46□□□□□ -0.73
TRAFD1-209ENST00000552896 ZNF613Q6PF04 617 aa10.46□□□□□ -0.73
TRAFD1-209ENST00000552896 ULK3Q6PHR2 472 aa10.46□□□□□ -0.73
TRAFD1-209ENST00000552896 C5orf46Q6UWT4 87 aa10.46□□□□□ -0.73
TRAFD1-209ENST00000552896 C16orf89Q6UX73 402 aa10.46□□□□□ -0.73
TRAFD1-209ENST00000552896 MCEMP1Q8IX19 187 aa10.46□□□□□ -0.73
TRAFD1-209ENST00000552896 ELOA3Q8NG57 546 aa10.46□□□□□ -0.73
TRAFD1-209ENST00000552896 OR6T1Q8NGN1 323 aa10.46□□□□□ -0.73
TRAFD1-209ENST00000552896 BCAS4Q8TDM0 211 aa10.46□□□□□ -0.73
TRAFD1-209ENST00000552896 STK35Q8TDR2 534 aa10.46□□□□□ -0.73
TRAFD1-209ENST00000552896 ABHD3Q8WU67 409 aa10.46□□□□□ -0.73
TRAFD1-209ENST00000552896 ROBO4Q8WZ75 1007 aa10.46□□□□□ -0.73
TRAFD1-209ENST00000552896 RNASE6Q93091 150 aaKnown RBP10.46□□□□□ -0.73
TRAFD1-209ENST00000552896 WFDC6Q9BQY6 131 aa10.46□□□□□ -0.73
TRAFD1-209ENST00000552896 POTEKPQ9BYX7 375 aa10.46□□□□□ -0.73
TRAFD1-209ENST00000552896 CXCR6O00574 342 aa10.45□□□□□ -0.74
TRAFD1-209ENST00000552896 GSTA4O15217 222 aa10.45□□□□□ -0.74
TRAFD1-209ENST00000552896 TPST2O60704 377 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms