RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 PACSIN3Q9UKS6 424 aa12.28□□□□□ -0.44
TROAP-213ENST00000550709 HDGFL3Q9Y3E1 203 aa12.28□□□□□ -0.44
TROAP-213ENST00000550709 KIAA1549Q9HCM3 1950 aa12.28□□□□□ -0.44
TROAP-213ENST00000550709 NCOA6Q14686 2063 aaPredicted RBP12.28□□□□□ -0.44
TROAP-213ENST00000550709 HEATR5AQ86XA9 2040 aa12.27□□□□□ -0.44
TROAP-213ENST00000550709 ELOA3DA6NLF2 546 aaPredicted RBP12.27□□□□□ -0.45
TROAP-213ENST00000550709 SYT5O00445 386 aa12.27□□□□□ -0.45
TROAP-213ENST00000550709 ZNF208O43345 1280 aa12.27□□□□□ -0.45
TROAP-213ENST00000550709 TPST2O60704 377 aa12.27□□□□□ -0.45
TROAP-213ENST00000550709 PRKD3O94806 890 aa12.27□□□□□ -0.45
TROAP-213ENST00000550709 IFNA14P01570 189 aa12.27□□□□□ -0.45
TROAP-213ENST00000550709 CRHP06850 196 aa12.27□□□□□ -0.45
TROAP-213ENST00000550709 FKBP2P26885 142 aaKnown RBP12.27□□□□□ -0.45
TROAP-213ENST00000550709 KDELR2P33947 212 aa12.27□□□□□ -0.45
TROAP-213ENST00000550709 CLK1P49759 484 aaKnown RBP12.27□□□□□ -0.45
TROAP-213ENST00000550709 CSNK2A1P68400 391 aaPredicted RBP12.27□□□□□ -0.45
TROAP-213ENST00000550709 SLC25A3Q00325 362 aa12.27□□□□□ -0.45
TROAP-213ENST00000550709 OR1Q1Q15612 314 aa12.27□□□□□ -0.45
TROAP-213ENST00000550709 ELOA3BQ3SY89 546 aa12.27□□□□□ -0.45
TROAP-213ENST00000550709 CYBRD1Q53TN4 286 aa12.27□□□□□ -0.45
TROAP-213ENST00000550709 GTF2IRD2BQ6EKJ0 949 aa12.27□□□□□ -0.45
TROAP-213ENST00000550709 FAM214BQ7L5A3 538 aa12.27□□□□□ -0.45
TROAP-213ENST00000550709 ATG4DQ86TL0 474 aaPredicted RBP12.27□□□□□ -0.45
TROAP-213ENST00000550709 GTF2IRD2Q86UP8 949 aa12.27□□□□□ -0.45
TROAP-213ENST00000550709 RANBP3LQ86VV4 465 aaPredicted RBP12.27□□□□□ -0.45
TROAP-213ENST00000550709 P3H2Q8IVL5 708 aa12.27□□□□□ -0.45
TROAP-213ENST00000550709 ELOA3Q8NG57 546 aa12.27□□□□□ -0.45
TROAP-213ENST00000550709 OR4D11Q8NGI4 311 aa12.27□□□□□ -0.45
TROAP-213ENST00000550709 OR6T1Q8NGN1 323 aa12.27□□□□□ -0.45
TROAP-213ENST00000550709 BCAS4Q8TDM0 211 aa12.27□□□□□ -0.45
TROAP-213ENST00000550709 RNF128Q8TEB7 428 aa12.27□□□□□ -0.45
TROAP-213ENST00000550709 GMPPAQ96IJ6 420 aaPredicted RBP12.27□□□□□ -0.45
TROAP-213ENST00000550709 TPD52L3Q96J77 140 aa12.27□□□□□ -0.45
TROAP-213ENST00000550709 MCHR1Q99705 422 aa12.27□□□□□ -0.45
TROAP-213ENST00000550709 RBM24Q9BX46 236 aaKnown RBP12.27□□□□□ -0.45
TROAP-213ENST00000550709 OPN3Q9H1Y3 402 aaPredicted RBP12.27□□□□□ -0.45
TROAP-213ENST00000550709 PIGMQ9H3S5 423 aa12.27□□□□□ -0.45
TROAP-213ENST00000550709 ALG2Q9H553 416 aa12.27□□□□□ -0.45
TROAP-213ENST00000550709 SPAG4Q9NPE6 437 aa12.27□□□□□ -0.45
TROAP-213ENST00000550709 SELENONQ9NZV5 590 aa12.27□□□□□ -0.45
TROAP-213ENST00000550709 TMEM181Q9P2C4 612 aa12.27□□□□□ -0.45
TROAP-213ENST00000550709 TESQ9UGI8 421 aaKnown RBP12.27□□□□□ -0.45
TROAP-213ENST00000550709 SH3GLB1Q9Y371 365 aa12.27□□□□□ -0.45
TROAP-213ENST00000550709 EMC9Q9Y3B6 208 aa12.27□□□□□ -0.45
TROAP-213ENST00000550709 CPSF4LA6NMK7 179 aaKnown RBP12.26□□□□□ -0.45
TROAP-213ENST00000550709 A8MVM7 634 aa12.26□□□□□ -0.45
TROAP-213ENST00000550709 CXCR6O00574 342 aa12.26□□□□□ -0.45
TROAP-213ENST00000550709 SMAD9O15198 467 aaKnown RBP12.26□□□□□ -0.45
TROAP-213ENST00000550709 SS18L1O75177 396 aaPredicted RBP12.26□□□□□ -0.45
TROAP-213ENST00000550709 PMS2P2O95744 297 aa12.26□□□□□ -0.45
TROAP-213ENST00000550709 C8BP07358 591 aa12.26□□□□□ -0.45
TROAP-213ENST00000550709 IMPDH2P12268 514 aa12.26□□□□□ -0.45
TROAP-213ENST00000550709 NCK1P16333 377 aa12.26□□□□□ -0.45
TROAP-213ENST00000550709 PTNP21246 168 aa12.26□□□□□ -0.45
TROAP-213ENST00000550709 FPR1P21462 350 aa12.26□□□□□ -0.45
TROAP-213ENST00000550709 CPOXP36551 454 aa12.26□□□□□ -0.45
TROAP-213ENST00000550709 FOXD4Q12950 439 aaPredicted RBP12.26□□□□□ -0.45
TROAP-213ENST00000550709 CEACAM7Q14002 265 aa12.26□□□□□ -0.45
TROAP-213ENST00000550709 KRT72Q14CN4 511 aa12.26□□□□□ -0.45
TROAP-213ENST00000550709 GUSBP1Q15486 140 aa12.26□□□□□ -0.45
TROAP-213ENST00000550709 OR7A5Q15622 319 aa12.26□□□□□ -0.45
TROAP-213ENST00000550709 NPTX1Q15818 432 aa12.26□□□□□ -0.45
TROAP-213ENST00000550709 NRF1Q16656 503 aa12.26□□□□□ -0.45
TROAP-213ENST00000550709 ALG10BQ5I7T1 473 aa12.26□□□□□ -0.45
TROAP-213ENST00000550709 EEF1A1P5Q5VTE0 462 aa12.26□□□□□ -0.45
TROAP-213ENST00000550709 FAM91A1Q658Y4 838 aa12.26□□□□□ -0.45
TROAP-213ENST00000550709 CARM1Q86X55 608 aa12.26□□□□□ -0.45
TROAP-213ENST00000550709 CCDC103Q8IW40 242 aa12.26□□□□□ -0.45
TROAP-213ENST00000550709 TUSC5Q8IXB3 177 aa12.26□□□□□ -0.45
TROAP-213ENST00000550709 LSMEM1Q8N8F7 131 aa12.26□□□□□ -0.45
TROAP-213ENST00000550709 DNAJA4Q8WW22 397 aaPredicted RBP12.26□□□□□ -0.45
TROAP-213ENST00000550709 RNASE6Q93091 150 aaKnown RBP12.26□□□□□ -0.45
TROAP-213ENST00000550709 MARVELD3Q96A59 401 aa12.26□□□□□ -0.45
TROAP-213ENST00000550709 ZHX1-C8orf76Q96EF9 292 aa12.26□□□□□ -0.45
TROAP-213ENST00000550709 LRRC46Q96FV0 321 aa12.26□□□□□ -0.45
TROAP-213ENST00000550709 NSL1Q96IY1 281 aa12.26□□□□□ -0.45
TROAP-213ENST00000550709 C12orf49Q9H741 205 aa12.26□□□□□ -0.45
TROAP-213ENST00000550709 KLHL13Q9P2N7 655 aa12.26□□□□□ -0.45
TROAP-213ENST00000550709 PRDM4Q9UKN5 801 aa12.26□□□□□ -0.45
TROAP-213ENST00000550709 BAG5Q9UL15 447 aa12.26□□□□□ -0.45
TROAP-213ENST00000550709 PROCRQ9UNN8 238 aa12.26□□□□□ -0.45
TROAP-213ENST00000550709 SLC9A8Q9Y2E8 581 aa12.26□□□□□ -0.45
TROAP-213ENST00000550709 PHF3Q92576 2039 aaKnown RBP12.25□□□□□ -0.45
TROAP-213ENST00000550709 TMEM229AB2RXF0 380 aa12.25□□□□□ -0.45
TROAP-213ENST00000550709 ZNF814B7Z6K7 855 aa12.25□□□□□ -0.45
TROAP-213ENST00000550709 TCN1P20061 433 aaPredicted RBP12.25□□□□□ -0.45
TROAP-213ENST00000550709 AGTR1P30556 359 aa12.25□□□□□ -0.45
TROAP-213ENST00000550709 IDUAP35475 653 aa12.25□□□□□ -0.45
TROAP-213ENST00000550709 OR1E2P47887 323 aa12.25□□□□□ -0.45
TROAP-213ENST00000550709 MAP2K6P52564 334 aa12.25□□□□□ -0.45
TROAP-213ENST00000550709 CDH12P55289 794 aa12.25□□□□□ -0.45
TROAP-213ENST00000550709 SLC35A1P78382 337 aa12.25□□□□□ -0.45
TROAP-213ENST00000550709 RASGEF1BQ0VAM2 473 aa12.25□□□□□ -0.45
TROAP-213ENST00000550709 RNPS1Q15287 305 aaKnown RBP12.25□□□□□ -0.45
TROAP-213ENST00000550709 EXOC3L2Q2M3D2 409 aa12.25□□□□□ -0.45
TROAP-213ENST00000550709 TMEM201Q5SNT2 666 aa12.25□□□□□ -0.45
TROAP-213ENST00000550709 C1orf140Q5VVS0 124 aa12.25□□□□□ -0.45
TROAP-213ENST00000550709 ULK3Q6PHR2 472 aa12.25□□□□□ -0.45
TROAP-213ENST00000550709 SLC43A2Q8N370 569 aa12.25□□□□□ -0.45
TROAP-213ENST00000550709 ZNF610Q8N9Z0 462 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms