RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 SH3GLB1Q9Y371 365 aa20.16■□□□□ 0.82
BRF1-216ENST00000550208 USP9YO00507 2555 aaPredicted RBP20.15■□□□□ 0.82
BRF1-216ENST00000550208 IGHV3-15A0A0B4J1V0 119 aa20.15■□□□□ 0.82
BRF1-216ENST00000550208 DVL2O14641 736 aa20.15■□□□□ 0.82
BRF1-216ENST00000550208 GGT1P19440 569 aa20.15■□□□□ 0.82
BRF1-216ENST00000550208 TCN1P20061 433 aaPredicted RBP20.15■□□□□ 0.82
BRF1-216ENST00000550208 KLK2P20151 261 aa20.15■□□□□ 0.82
BRF1-216ENST00000550208 ENPP1P22413 925 aa20.15■□□□□ 0.82
BRF1-216ENST00000550208 GRNP28799 593 aaKnown RBP20.15■□□□□ 0.82
BRF1-216ENST00000550208 OPRM1P35372 400 aa20.15■□□□□ 0.82
BRF1-216ENST00000550208 MAP2K6P52564 334 aa20.15■□□□□ 0.82
BRF1-216ENST00000550208 NCALDP61601 193 aa20.15■□□□□ 0.82
BRF1-216ENST00000550208 SELENOWP63302 87 aa20.15■□□□□ 0.82
BRF1-216ENST00000550208 ZNF239Q16600 458 aaKnown RBP20.15■□□□□ 0.82
BRF1-216ENST00000550208 GLYATQ6IB77 296 aa20.15■□□□□ 0.82
BRF1-216ENST00000550208 OR2A2Q6IF42 318 aa20.15■□□□□ 0.82
BRF1-216ENST00000550208 CARM1Q86X55 608 aa20.15■□□□□ 0.82
BRF1-216ENST00000550208 RELL2Q8NC24 303 aaPredicted RBP20.15■□□□□ 0.82
BRF1-216ENST00000550208 TPD52L3Q96J77 140 aa20.15■□□□□ 0.82
BRF1-216ENST00000550208 POTEKPQ9BYX7 375 aa20.15■□□□□ 0.82
BRF1-216ENST00000550208 KCNJ16Q9NPI9 418 aa20.15■□□□□ 0.82
BRF1-216ENST00000550208 CLEC4AQ9UMR7 237 aa20.15■□□□□ 0.82
BRF1-216ENST00000550208 HDGFL3Q9Y3E1 203 aa20.15■□□□□ 0.82
BRF1-216ENST00000550208 A0A1W2PNV4 684 aa20.14■□□□□ 0.81
BRF1-216ENST00000550208 A8MVM7 634 aa20.14■□□□□ 0.81
BRF1-216ENST00000550208 PRSS44E7EML9 344 aa20.14■□□□□ 0.81
BRF1-216ENST00000550208 UBOX5O94941 541 aa20.14■□□□□ 0.81
BRF1-216ENST00000550208 IL18BPO95998 194 aa20.14■□□□□ 0.81
BRF1-216ENST00000550208 IMPDH2P12268 514 aa20.14■□□□□ 0.81
BRF1-216ENST00000550208 FCGR2AP12318 317 aa20.14■□□□□ 0.81
BRF1-216ENST00000550208 COL8A1P27658 744 aa20.14■□□□□ 0.81
BRF1-216ENST00000550208 MSX2P35548 267 aaPredicted RBP20.14■□□□□ 0.81
BRF1-216ENST00000550208 KIR2DL2P43627 348 aaPredicted RBP20.14■□□□□ 0.81
BRF1-216ENST00000550208 OR1E2P47887 323 aa20.14■□□□□ 0.81
BRF1-216ENST00000550208 OR2B6P58173 313 aa20.14■□□□□ 0.81
BRF1-216ENST00000550208 ENTPD8Q5MY95 495 aa20.14■□□□□ 0.81
BRF1-216ENST00000550208 SAMD4BQ5PRF9 694 aaKnown RBP20.14■□□□□ 0.81
BRF1-216ENST00000550208 ULK3Q6PHR2 472 aa20.14■□□□□ 0.81
BRF1-216ENST00000550208 RNF217Q8TC41 542 aa20.14■□□□□ 0.81
BRF1-216ENST00000550208 DNAJA4Q8WW22 397 aaPredicted RBP20.14■□□□□ 0.81
BRF1-216ENST00000550208 TRAPPC4Q9Y296 219 aa20.14■□□□□ 0.81
BRF1-216ENST00000550208 SLC9A8Q9Y2E8 581 aa20.14■□□□□ 0.81
BRF1-216ENST00000550208 KLF2Q9Y5W3 355 aaPredicted RBP20.14■□□□□ 0.81
BRF1-216ENST00000550208 COL12A1Q99715 3063 aa20.14■□□□□ 0.81
BRF1-216ENST00000550208 INTS1Q8N201 2190 aaKnown RBP20.13■□□□□ 0.81
BRF1-216ENST00000550208 A0A0B4J2E0 115 aa20.13■□□□□ 0.81
BRF1-216ENST00000550208 A0A1B0GX12 115 aa20.13■□□□□ 0.81
BRF1-216ENST00000550208 ELOA3DA6NLF2 546 aaPredicted RBP20.13■□□□□ 0.81
BRF1-216ENST00000550208 CPSF4LA6NMK7 179 aaKnown RBP20.13■□□□□ 0.81
BRF1-216ENST00000550208 C19orf84I3L1E1 186 aa20.13■□□□□ 0.81
BRF1-216ENST00000550208 FMO6PO60774 539 aa20.13■□□□□ 0.81
BRF1-216ENST00000550208 TNFSF13O75888 250 aa20.13■□□□□ 0.81
BRF1-216ENST00000550208 PMS2P2O95744 297 aa20.13■□□□□ 0.81
BRF1-216ENST00000550208 SERPINA1P01009 418 aa20.13■□□□□ 0.81
BRF1-216ENST00000550208 HSD17B1P14061 328 aa20.13■□□□□ 0.81
BRF1-216ENST00000550208 CSNK2A1P68400 391 aaPredicted RBP20.13■□□□□ 0.81
BRF1-216ENST00000550208 CEACAM7Q14002 265 aa20.13■□□□□ 0.81
BRF1-216ENST00000550208 SLC25A35Q3KQZ1 300 aa20.13■□□□□ 0.81
BRF1-216ENST00000550208 ELOA3BQ3SY89 546 aa20.13■□□□□ 0.81
BRF1-216ENST00000550208 ALG10BQ5I7T1 473 aa20.13■□□□□ 0.81
BRF1-216ENST00000550208 HIST2H2BCQ6DN03 193 aa20.13■□□□□ 0.81
BRF1-216ENST00000550208 C6orf89Q6UWU4 347 aa20.13■□□□□ 0.81
BRF1-216ENST00000550208 CBLL1Q75N03 491 aa20.13■□□□□ 0.81
BRF1-216ENST00000550208 FCRLAQ7L513 359 aa20.13■□□□□ 0.81
BRF1-216ENST00000550208 TSPYL5Q86VY4 417 aaPredicted RBP20.13■□□□□ 0.81
BRF1-216ENST00000550208 CNEP1R1Q8N9A8 125 aa20.13■□□□□ 0.81
BRF1-216ENST00000550208 ELOA3Q8NG57 546 aa20.13■□□□□ 0.81
BRF1-216ENST00000550208 SLC38A4Q969I6 547 aa20.13■□□□□ 0.81
BRF1-216ENST00000550208 FAM162AQ96A26 154 aa20.13■□□□□ 0.81
BRF1-216ENST00000550208 SLC47A1Q96FL8 570 aa20.13■□□□□ 0.81
BRF1-216ENST00000550208 SFXN3Q9BWM7 321 aa20.13■□□□□ 0.81
BRF1-216ENST00000550208 C12orf10Q9HB07 376 aa20.13■□□□□ 0.81
BRF1-216ENST00000550208 ADPRHL2Q9NX46 363 aa20.13■□□□□ 0.81
BRF1-216ENST00000550208 UTP20O75691 2785 aaKnown RBP20.12■□□□□ 0.81
BRF1-216ENST00000550208 SMAD9O15198 467 aaKnown RBP20.12■□□□□ 0.81
BRF1-216ENST00000550208 ZNF682O95780 498 aa20.12■□□□□ 0.81
BRF1-216ENST00000550208 CRHP06850 196 aa20.12■□□□□ 0.81
BRF1-216ENST00000550208 CDH12P55289 794 aa20.12■□□□□ 0.81
BRF1-216ENST00000550208 SIRPAP78324 504 aa20.12■□□□□ 0.81
BRF1-216ENST00000550208 GUSBP1Q15486 140 aa20.12■□□□□ 0.81
BRF1-216ENST00000550208 SP5Q6BEB4 398 aaPredicted RBP20.12■□□□□ 0.81
BRF1-216ENST00000550208 GTF2IRD2BQ6EKJ0 949 aa20.12■□□□□ 0.81
BRF1-216ENST00000550208 VWA1Q6PCB0 445 aa20.12■□□□□ 0.81
BRF1-216ENST00000550208 BTLAQ7Z6A9 289 aa20.12■□□□□ 0.81
BRF1-216ENST00000550208 VTCN1Q7Z7D3 282 aa20.12■□□□□ 0.81
BRF1-216ENST00000550208 GTF2IRD2Q86UP8 949 aa20.12■□□□□ 0.81
BRF1-216ENST00000550208 STK35Q8TDR2 534 aa20.12■□□□□ 0.81
BRF1-216ENST00000550208 STARD4Q96DR4 205 aa20.12■□□□□ 0.81
BRF1-216ENST00000550208 TAS2R1Q9NYW7 299 aa20.12■□□□□ 0.81
BRF1-216ENST00000550208 SELENONQ9NZV5 590 aa20.12■□□□□ 0.81
BRF1-216ENST00000550208 SPTAN1Q13813 2472 aaKnown RBP20.11■□□□□ 0.81
BRF1-216ENST00000550208 NPIPB7O75200 414 aa20.11■□□□□ 0.81
BRF1-216ENST00000550208 PRKD3O94806 890 aa20.11■□□□□ 0.81
BRF1-216ENST00000550208 LYPD3O95274 346 aa20.11■□□□□ 0.81
BRF1-216ENST00000550208 THY1P04216 161 aa20.11■□□□□ 0.81
BRF1-216ENST00000550208 PNMTP11086 282 aa20.11■□□□□ 0.81
BRF1-216ENST00000550208 FPR1P21462 350 aa20.11■□□□□ 0.81
BRF1-216ENST00000550208 IDUAP35475 653 aa20.11■□□□□ 0.81
BRF1-216ENST00000550208 EGR4Q05215 589 aa20.11■□□□□ 0.81
BRF1-216ENST00000550208 TFF3Q07654 80 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms