RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 REEP3Q6NUK4 255 aa13.61□□□□□ -0.23
SSH1-204ENST00000546697 PAMR1Q6UXH9 720 aa13.61□□□□□ -0.23
SSH1-204ENST00000546697 Q6ZT83 130 aa13.61□□□□□ -0.23
SSH1-204ENST00000546697 NUFIP2Q7Z417 695 aaKnown RBP13.61□□□□□ -0.23
SSH1-204ENST00000546697 HMGN2P46Q86SG4 172 aa13.61□□□□□ -0.23
SSH1-204ENST00000546697 MAL2Q969L2 176 aa13.61□□□□□ -0.23
SSH1-204ENST00000546697 ANKRD27Q96NW4 1050 aa13.61□□□□□ -0.23
SSH1-204ENST00000546697 DCTN4Q9UJW0 460 aa13.61□□□□□ -0.23
SSH1-204ENST00000546697 NDUFAF1Q9Y375 327 aa13.61□□□□□ -0.23
SSH1-204ENST00000546697 TMED7Q9Y3B3 224 aa13.61□□□□□ -0.23
SSH1-204ENST00000546697 FREM1Q5H8C1 2179 aa13.61□□□□□ -0.23
SSH1-204ENST00000546697 TMEM72A0PK05 275 aa13.6□□□□□ -0.23
SSH1-204ENST00000546697 FESP07332 822 aa13.6□□□□□ -0.23
SSH1-204ENST00000546697 IMPDH2P12268 514 aa13.6□□□□□ -0.23
SSH1-204ENST00000546697 PRRC2AP48634 2157 aaKnown RBP13.6□□□□□ -0.23
SSH1-204ENST00000546697 CDK6Q00534 326 aa13.6□□□□□ -0.23
SSH1-204ENST00000546697 RPS26P11Q5JNZ5 115 aaPredicted RBP13.6□□□□□ -0.23
SSH1-204ENST00000546697 GCNT6Q5T4J0 391 aa13.6□□□□□ -0.23
SSH1-204ENST00000546697 PAQR6Q6TCH4 344 aa13.6□□□□□ -0.23
SSH1-204ENST00000546697 SSX8Q7RTT4 187 aa13.6□□□□□ -0.23
SSH1-204ENST00000546697 ATG4DQ86TL0 474 aaPredicted RBP13.6□□□□□ -0.23
SSH1-204ENST00000546697 PTOV1Q86YD1 416 aa13.6□□□□□ -0.23
SSH1-204ENST00000546697 BHLHE22Q8NFJ8 381 aaPredicted RBP13.6□□□□□ -0.23
SSH1-204ENST00000546697 PIGXQ8TBF5 258 aa13.6□□□□□ -0.23
SSH1-204ENST00000546697 C3orf49Q96BT1 292 aa13.6□□□□□ -0.23
SSH1-204ENST00000546697 DDIT4LQ96D03 193 aa13.6□□□□□ -0.23
SSH1-204ENST00000546697 ALPK1Q96QP1 1244 aa13.6□□□□□ -0.23
SSH1-204ENST00000546697 CGREF1Q99674 301 aa13.6□□□□□ -0.23
SSH1-204ENST00000546697 TMEM204Q9BSN7 226 aa13.6□□□□□ -0.23
SSH1-204ENST00000546697 RAI1Q7Z5J4 1906 aaPredicted RBP13.6□□□□□ -0.23
SSH1-204ENST00000546697 A0A0G2JND7 137 aa13.59□□□□□ -0.23
SSH1-204ENST00000546697 EVPLLA8MZ36 301 aa13.59□□□□□ -0.23
SSH1-204ENST00000546697 GPR171O14626 319 aa13.59□□□□□ -0.23
SSH1-204ENST00000546697 CASKO14936 926 aa13.59□□□□□ -0.23
SSH1-204ENST00000546697 SLC22A2O15244 555 aa13.59□□□□□ -0.23
SSH1-204ENST00000546697 KLF4O43474 513 aa13.59□□□□□ -0.23
SSH1-204ENST00000546697 NPPAP01160 153 aa13.59□□□□□ -0.23
SSH1-204ENST00000546697 PRG2P13727 222 aa13.59□□□□□ -0.23
SSH1-204ENST00000546697 NCF2P19878 526 aaPredicted RBP13.59□□□□□ -0.23
SSH1-204ENST00000546697 KLK2P20151 261 aa13.59□□□□□ -0.23
SSH1-204ENST00000546697 GZMMP51124 257 aa13.59□□□□□ -0.23
SSH1-204ENST00000546697 IST1P53990 364 aa13.59□□□□□ -0.23
SSH1-204ENST00000546697 SLC35A1P78382 337 aa13.59□□□□□ -0.23
SSH1-204ENST00000546697 ZNF311Q5JNZ3 666 aa13.59□□□□□ -0.23
SSH1-204ENST00000546697 SFRP5Q5T4F7 317 aa13.59□□□□□ -0.23
SSH1-204ENST00000546697 C1QTNF12Q5T7M4 302 aa13.59□□□□□ -0.23
SSH1-204ENST00000546697 SEZ6L2Q6UXD5 910 aa13.59□□□□□ -0.23
SSH1-204ENST00000546697 DHDDSQ86SQ9 333 aa13.59□□□□□ -0.23
SSH1-204ENST00000546697 ATP6V1C2Q8NEY4 427 aa13.59□□□□□ -0.23
SSH1-204ENST00000546697 STEAP2Q8NFT2 490 aa13.59□□□□□ -0.23
SSH1-204ENST00000546697 STK35Q8TDR2 534 aa13.59□□□□□ -0.23
SSH1-204ENST00000546697 IGFBPL1Q8WX77 278 aa13.59□□□□□ -0.23
SSH1-204ENST00000546697 ZHX1-C8orf76Q96EF9 292 aa13.59□□□□□ -0.23
SSH1-204ENST00000546697 BOD1Q96IK1 185 aa13.59□□□□□ -0.23
SSH1-204ENST00000546697 ZNF317Q96PQ6 595 aaPredicted RBP13.59□□□□□ -0.23
SSH1-204ENST00000546697 MED18Q9BUE0 208 aa13.59□□□□□ -0.23
SSH1-204ENST00000546697 SPATA5L1Q9BVQ7 753 aa13.59□□□□□ -0.23
SSH1-204ENST00000546697 TMEM120AQ9BXJ8 343 aa13.59□□□□□ -0.23
SSH1-204ENST00000546697 OR11A1Q9GZK7 315 aa13.59□□□□□ -0.23
SSH1-204ENST00000546697 LIME1Q9H400 295 aa13.59□□□□□ -0.23
SSH1-204ENST00000546697 KAT8Q9H7Z6 458 aaKnown RBP13.59□□□□□ -0.23
SSH1-204ENST00000546697 KLHL28Q9NXS3 571 aa13.59□□□□□ -0.23
SSH1-204ENST00000546697 EMC3Q9P0I2 261 aa13.59□□□□□ -0.23
SSH1-204ENST00000546697 IGHV3-15A0A0B4J1V0 119 aa13.58□□□□□ -0.24
SSH1-204ENST00000546697 ZC3H12DA2A288 527 aaKnown RBP13.58□□□□□ -0.24
SSH1-204ENST00000546697 PRORSD1PA6NEY8 169 aa13.58□□□□□ -0.24
SSH1-204ENST00000546697 LIPT2A6NK58 231 aa13.58□□□□□ -0.24
SSH1-204ENST00000546697 A8MVM7 634 aa13.58□□□□□ -0.24
SSH1-204ENST00000546697 FXYD1O00168 92 aa13.58□□□□□ -0.24
SSH1-204ENST00000546697 ATE1O95260 518 aa13.58□□□□□ -0.24
SSH1-204ENST00000546697 GKN3PP0CG01 181 aa13.58□□□□□ -0.24
SSH1-204ENST00000546697 TROVE2P10155 538 aaKnown RBP eCLIP13.58□□□□□ -0.24
SSH1-204ENST00000546697 KCNJ5P48544 419 aa13.58□□□□□ -0.24
SSH1-204ENST00000546697 P2RY4P51582 365 aa13.58□□□□□ -0.24
SSH1-204ENST00000546697 ITGADQ13349 1161 aa13.58□□□□□ -0.24
SSH1-204ENST00000546697 SLC17A1Q14916 467 aa13.58□□□□□ -0.24
SSH1-204ENST00000546697 GALNT5Q7Z7M9 940 aa13.58□□□□□ -0.24
SSH1-204ENST00000546697 SERPINA11Q86U17 422 aa13.58□□□□□ -0.24
SSH1-204ENST00000546697 KRT73Q86Y46 540 aa13.58□□□□□ -0.24
SSH1-204ENST00000546697 HIPK4Q8NE63 616 aa13.58□□□□□ -0.24
SSH1-204ENST00000546697 NRGNQ92686 78 aa13.58□□□□□ -0.24
SSH1-204ENST00000546697 ZNF300Q96RE9 604 aaPredicted RBP13.58□□□□□ -0.24
SSH1-204ENST00000546697 SF3B5Q9BWJ5 86 aaKnown RBP13.58□□□□□ -0.24
SSH1-204ENST00000546697 FGFR1OP2Q9NVK5 253 aa13.58□□□□□ -0.24
SSH1-204ENST00000546697 MALT1Q9UDY8 824 aa13.58□□□□□ -0.24
SSH1-204ENST00000546697 C5orf58C9J3I9 102 aa13.57□□□□□ -0.24
SSH1-204ENST00000546697 FTCDNL1E5RQL4 147 aa13.57□□□□□ -0.24
SSH1-204ENST00000546697 PDLIM1O00151 329 aa13.57□□□□□ -0.24
SSH1-204ENST00000546697 FBP2O00757 339 aa13.57□□□□□ -0.24
SSH1-204ENST00000546697 ANGPT2O15123 496 aa13.57□□□□□ -0.24
SSH1-204ENST00000546697 MFN2O95140 757 aa13.57□□□□□ -0.24
SSH1-204ENST00000546697 RAF1P04049 648 aa13.57□□□□□ -0.24
SSH1-204ENST00000546697 C8BP07358 591 aa13.57□□□□□ -0.24
SSH1-204ENST00000546697 SLC6A2P23975 617 aa13.57□□□□□ -0.24
SSH1-204ENST00000546697 NTF4P34130 210 aa13.57□□□□□ -0.24
SSH1-204ENST00000546697 COPZ1P61923 177 aa13.57□□□□□ -0.24
SSH1-204ENST00000546697 SCARB2Q14108 478 aa13.57□□□□□ -0.24
SSH1-204ENST00000546697 BEX5Q5H9J7 111 aa13.57□□□□□ -0.24
SSH1-204ENST00000546697 FAM91A1Q658Y4 838 aa13.57□□□□□ -0.24
SSH1-204ENST00000546697 PPP4R4Q6NUP7 873 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms