RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 STARD4Q96DR4 205 aa17.09■□□□□ 0.33
DDX55-211ENST00000544429 GMPPAQ96IJ6 420 aaPredicted RBP17.09■□□□□ 0.33
DDX55-211ENST00000544429 ZNF559Q9BR84 538 aa17.09■□□□□ 0.33
DDX55-211ENST00000544429 PRR14Q9BWN1 585 aa17.09■□□□□ 0.33
DDX55-211ENST00000544429 POTEKPQ9BYX7 375 aa17.09■□□□□ 0.33
DDX55-211ENST00000544429 ENKD1Q9H0I2 346 aa17.09■□□□□ 0.33
DDX55-211ENST00000544429 GP6Q9HCN6 339 aa17.09■□□□□ 0.33
DDX55-211ENST00000544429 ING1Q9UK53 422 aaPredicted RBP17.09■□□□□ 0.33
DDX55-211ENST00000544429 TRAPPC4Q9Y296 219 aa17.09■□□□□ 0.33
DDX55-211ENST00000544429 SETXQ7Z333 2677 aaKnown RBP17.09■□□□□ 0.33
DDX55-211ENST00000544429 A0A1B0GWA3 101 aa17.08■□□□□ 0.32
DDX55-211ENST00000544429 SMAD9O15198 467 aaKnown RBP17.08■□□□□ 0.32
DDX55-211ENST00000544429 SYNGR4O95473 234 aa17.08■□□□□ 0.32
DDX55-211ENST00000544429 CGAP01215 116 aa17.08■□□□□ 0.32
DDX55-211ENST00000544429 T-ENOLP0DO92 83 aa17.08■□□□□ 0.32
DDX55-211ENST00000544429 ENPP1P22413 925 aa17.08■□□□□ 0.32
DDX55-211ENST00000544429 COL8A1P27658 744 aa17.08■□□□□ 0.32
DDX55-211ENST00000544429 CPOXP36551 454 aa17.08■□□□□ 0.32
DDX55-211ENST00000544429 AGFG1P52594 562 aaKnown RBP17.08■□□□□ 0.32
DDX55-211ENST00000544429 FAM214BQ7L5A3 538 aa17.08■□□□□ 0.32
DDX55-211ENST00000544429 TSPYL5Q86VY4 417 aaPredicted RBP17.08■□□□□ 0.32
DDX55-211ENST00000544429 OR52E4Q8NGH9 312 aa17.08■□□□□ 0.32
DDX55-211ENST00000544429 DNAJA4Q8WW22 397 aaPredicted RBP17.08■□□□□ 0.32
DDX55-211ENST00000544429 ROBO4Q8WZ75 1007 aa17.08■□□□□ 0.32
DDX55-211ENST00000544429 DDIT4LQ96D03 193 aa17.08■□□□□ 0.32
DDX55-211ENST00000544429 GLRX2Q9NS18 164 aa17.08■□□□□ 0.32
DDX55-211ENST00000544429 A0A0B4J2E0 115 aa17.07■□□□□ 0.32
DDX55-211ENST00000544429 A0A1B0GX12 115 aa17.07■□□□□ 0.32
DDX55-211ENST00000544429 M0R3H8 397 aa17.07■□□□□ 0.32
DDX55-211ENST00000544429 SULT2B1O00204 365 aa17.07■□□□□ 0.32
DDX55-211ENST00000544429 IMPDH2P12268 514 aa17.07■□□□□ 0.32
DDX55-211ENST00000544429 KLK2P20151 261 aa17.07■□□□□ 0.32
DDX55-211ENST00000544429 CXCR1P25024 350 aa17.07■□□□□ 0.32
DDX55-211ENST00000544429 ASCL1P50553 236 aa17.07■□□□□ 0.32
DDX55-211ENST00000544429 CSNK2A1P68400 391 aaPredicted RBP17.07■□□□□ 0.32
DDX55-211ENST00000544429 EGR4Q05215 589 aa17.07■□□□□ 0.32
DDX55-211ENST00000544429 RNPS1Q15287 305 aaKnown RBP17.07■□□□□ 0.32
DDX55-211ENST00000544429 SWT1Q5T5J6 900 aaKnown RBP17.07■□□□□ 0.32
DDX55-211ENST00000544429 VWA1Q6PCB0 445 aa17.07■□□□□ 0.32
DDX55-211ENST00000544429 FCRLAQ7L513 359 aa17.07■□□□□ 0.32
DDX55-211ENST00000544429 RBM45Q8IUH3 476 aaKnown RBP17.07■□□□□ 0.32
DDX55-211ENST00000544429 SLC43A2Q8N370 569 aa17.07■□□□□ 0.32
DDX55-211ENST00000544429 ABHD3Q8WU67 409 aa17.07■□□□□ 0.32
DDX55-211ENST00000544429 SLC38A4Q969I6 547 aa17.07■□□□□ 0.32
DDX55-211ENST00000544429 PIGMQ9H3S5 423 aa17.07■□□□□ 0.32
DDX55-211ENST00000544429 CD300AQ9UGN4 299 aa17.07■□□□□ 0.32
DDX55-211ENST00000544429 SLC13A4Q9UKG4 626 aa17.07■□□□□ 0.32
DDX55-211ENST00000544429 PACSIN3Q9UKS6 424 aa17.07■□□□□ 0.32
DDX55-211ENST00000544429 BAG5Q9UL15 447 aa17.07■□□□□ 0.32
DDX55-211ENST00000544429 CELSR2Q9HCU4 2923 aa17.07■□□□□ 0.32
DDX55-211ENST00000544429 FREM1Q5H8C1 2179 aa17.06■□□□□ 0.32
DDX55-211ENST00000544429 UNC79Q9P2D8 2635 aa17.06■□□□□ 0.32
DDX55-211ENST00000544429 A8MVM7 634 aa17.06■□□□□ 0.32
DDX55-211ENST00000544429 CXCR6O00574 342 aa17.06■□□□□ 0.32
DDX55-211ENST00000544429 CYTIPO60759 359 aa17.06■□□□□ 0.32
DDX55-211ENST00000544429 LYPD3O95274 346 aa17.06■□□□□ 0.32
DDX55-211ENST00000544429 IFNA14P01570 189 aa17.06■□□□□ 0.32
DDX55-211ENST00000544429 TFPIP10646 304 aa17.06■□□□□ 0.32
DDX55-211ENST00000544429 HSD17B1P14061 328 aa17.06■□□□□ 0.32
DDX55-211ENST00000544429 CCNA2P20248 432 aa17.06■□□□□ 0.32
DDX55-211ENST00000544429 PCYT1AP49585 367 aa17.06■□□□□ 0.32
DDX55-211ENST00000544429 MNAT1P51948 309 aa17.06■□□□□ 0.32
DDX55-211ENST00000544429 SELENOWP63302 87 aa17.06■□□□□ 0.32
DDX55-211ENST00000544429 SLC25A3Q00325 362 aa17.06■□□□□ 0.32
DDX55-211ENST00000544429 BNIP2Q12982 314 aa17.06■□□□□ 0.32
DDX55-211ENST00000544429 OR1Q1Q15612 314 aa17.06■□□□□ 0.32
DDX55-211ENST00000544429 CYBRD1Q53TN4 286 aa17.06■□□□□ 0.32
DDX55-211ENST00000544429 SP5Q6BEB4 398 aaPredicted RBP17.06■□□□□ 0.32
DDX55-211ENST00000544429 HIST2H2BCQ6DN03 193 aa17.06■□□□□ 0.32
DDX55-211ENST00000544429 ABLIM2Q6H8Q1 611 aa17.06■□□□□ 0.32
DDX55-211ENST00000544429 ZNF613Q6PF04 617 aa17.06■□□□□ 0.32
DDX55-211ENST00000544429 ULK3Q6PHR2 472 aa17.06■□□□□ 0.32
DDX55-211ENST00000544429 BTLAQ7Z6A9 289 aa17.06■□□□□ 0.32
DDX55-211ENST00000544429 RANBP3LQ86VV4 465 aaPredicted RBP17.06■□□□□ 0.32
DDX55-211ENST00000544429 STK35Q8TDR2 534 aa17.06■□□□□ 0.32
DDX55-211ENST00000544429 SLC26A7Q8TE54 656 aa17.06■□□□□ 0.32
DDX55-211ENST00000544429 SPOCK3Q9BQ16 436 aa17.06■□□□□ 0.32
DDX55-211ENST00000544429 PRRG4Q9BZD6 226 aa17.06■□□□□ 0.32
DDX55-211ENST00000544429 BCO1Q9HAY6 547 aa17.06■□□□□ 0.32
DDX55-211ENST00000544429 IGKV1D-42A0A075B6H8 117 aa17.05■□□□□ 0.32
DDX55-211ENST00000544429 A0A087WUJ7 227 aa17.05■□□□□ 0.32
DDX55-211ENST00000544429 LIPT2A6NK58 231 aa17.05■□□□□ 0.32
DDX55-211ENST00000544429 A8MXE2 369 aa17.05■□□□□ 0.32
DDX55-211ENST00000544429 MSTNO14793 375 aa17.05■□□□□ 0.32
DDX55-211ENST00000544429 THY1P04216 161 aa17.05■□□□□ 0.32
DDX55-211ENST00000544429 CD8BP10966 210 aa17.05■□□□□ 0.32
DDX55-211ENST00000544429 PNMTP11086 282 aa17.05■□□□□ 0.32
DDX55-211ENST00000544429 GGT1P19440 569 aa17.05■□□□□ 0.32
DDX55-211ENST00000544429 AGTR1P30556 359 aa17.05■□□□□ 0.32
DDX55-211ENST00000544429 NCALDP61601 193 aa17.05■□□□□ 0.32
DDX55-211ENST00000544429 PDK3Q15120 406 aa17.05■□□□□ 0.32
DDX55-211ENST00000544429 ALG10BQ5I7T1 473 aa17.05■□□□□ 0.32
DDX55-211ENST00000544429 GTF2IRD2BQ6EKJ0 949 aa17.05■□□□□ 0.32
DDX55-211ENST00000544429 LINC00114Q6XXX2 140 aa17.05■□□□□ 0.32
DDX55-211ENST00000544429 GTF2IRD2Q86UP8 949 aa17.05■□□□□ 0.32
DDX55-211ENST00000544429 NSL1Q96IY1 281 aa17.05■□□□□ 0.32
DDX55-211ENST00000544429 MCHR1Q99705 422 aa17.05■□□□□ 0.32
DDX55-211ENST00000544429 KCTD14Q9BQ13 255 aaPredicted RBP17.05■□□□□ 0.32
DDX55-211ENST00000544429 PSD2Q9BQI7 771 aa17.05■□□□□ 0.32
DDX55-211ENST00000544429 PTDSS2Q9BVG9 487 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms