RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 RSL24D1Q9UHA3 163 aaKnown RBP8.51□□□□□ -1.05
GNE-206ENST00000543356 TCFL5Q9UL49 500 aa8.51□□□□□ -1.05
GNE-206ENST00000543356 SIGLEC7Q9Y286 467 aa8.51□□□□□ -1.05
GNE-206ENST00000543356 TTC28Q96AY4 2481 aa8.51□□□□□ -1.05
GNE-206ENST00000543356 IGKV1D-42A0A075B6H8 117 aa8.51□□□□□ -1.05
GNE-206ENST00000543356 ZSCAN5BA6NJL1 495 aa8.51□□□□□ -1.05
GNE-206ENST00000543356 ELOA3DA6NLF2 546 aaPredicted RBP8.51□□□□□ -1.05
GNE-206ENST00000543356 ZNF701M0R085 212 aaPredicted RBP8.51□□□□□ -1.05
GNE-206ENST00000543356 SURF4O15260 269 aa8.51□□□□□ -1.05
GNE-206ENST00000543356 SCO2O43819 266 aa8.51□□□□□ -1.05
GNE-206ENST00000543356 CDC40O60508 579 aaKnown RBP eCLIP8.51□□□□□ -1.05
GNE-206ENST00000543356 PTP4A3O75365 173 aa8.51□□□□□ -1.05
GNE-206ENST00000543356 SULT1C4O75897 302 aa8.51□□□□□ -1.05
GNE-206ENST00000543356 HMGN1P05114 100 aa8.51□□□□□ -1.05
GNE-206ENST00000543356 SAGP10523 405 aaPredicted RBP8.51□□□□□ -1.05
GNE-206ENST00000543356 SUMO3P55854 103 aaPredicted RBP8.51□□□□□ -1.05
GNE-206ENST00000543356 EMX1Q04741 257 aaPredicted RBP8.51□□□□□ -1.05
GNE-206ENST00000543356 CRYZQ08257 329 aaKnown RBP8.51□□□□□ -1.05
GNE-206ENST00000543356 SNAPC1Q16533 368 aa8.51□□□□□ -1.05
GNE-206ENST00000543356 TMEM44Q2T9K0 475 aa8.51□□□□□ -1.05
GNE-206ENST00000543356 ELOA3BQ3SY89 546 aa8.51□□□□□ -1.05
GNE-206ENST00000543356 SMARCD3Q6STE5 483 aa8.51□□□□□ -1.05
GNE-206ENST00000543356 PPP1R32Q7Z5V6 425 aa8.51□□□□□ -1.05
GNE-206ENST00000543356 CYP4Z2PQ8N1L4 340 aa8.51□□□□□ -1.05
GNE-206ENST00000543356 ELOA3Q8NG57 546 aa8.51□□□□□ -1.05
GNE-206ENST00000543356 ZNF563Q8TA94 476 aa8.51□□□□□ -1.05
GNE-206ENST00000543356 FAR1Q8WVX9 515 aa8.51□□□□□ -1.05
GNE-206ENST00000543356 SH3YL1Q96HL8 342 aaPredicted RBP8.51□□□□□ -1.05
GNE-206ENST00000543356 GPR83Q9NYM4 423 aa8.51□□□□□ -1.05
GNE-206ENST00000543356 FOXJ2Q9P0K8 574 aa8.51□□□□□ -1.05
GNE-206ENST00000543356 WDFY4Q6ZS81 3184 aa8.51□□□□□ -1.05
GNE-206ENST00000543356 KIF26BQ2KJY2 2108 aa8.5□□□□□ -1.05
GNE-206ENST00000543356 NSG1A0A0A6YYJ2 146 aa8.5□□□□□ -1.05
GNE-206ENST00000543356 KDM4EB2RXH2 506 aaPredicted RBP8.5□□□□□ -1.05
GNE-206ENST00000543356 SEC16AO15027 2179 aa8.5□□□□□ -1.05
GNE-206ENST00000543356 TLX2O43763 284 aaPredicted RBP8.5□□□□□ -1.05
GNE-206ENST00000543356 OR2J2O76002 312 aa8.5□□□□□ -1.05
GNE-206ENST00000543356 FOSL1P15407 271 aa8.5□□□□□ -1.05
GNE-206ENST00000543356 BMP7P18075 431 aa8.5□□□□□ -1.05
GNE-206ENST00000543356 TCN2P20062 427 aa8.5□□□□□ -1.05
GNE-206ENST00000543356 MASP1P48740 699 aa8.5□□□□□ -1.05
GNE-206ENST00000543356 GAS1P54826 345 aa8.5□□□□□ -1.05
GNE-206ENST00000543356 TBCEQ15813 527 aaPredicted RBP8.5□□□□□ -1.05
GNE-206ENST00000543356 NTRK2Q16620 822 aa8.5□□□□□ -1.05
GNE-206ENST00000543356 SYT14P1Q58G82 188 aa8.5□□□□□ -1.05
GNE-206ENST00000543356 CLEC12AQ5QGZ9 265 aa8.5□□□□□ -1.05
GNE-206ENST00000543356 SLC30A6Q6NXT4 461 aa8.5□□□□□ -1.05
GNE-206ENST00000543356 ARMC10Q8N2F6 343 aa8.5□□□□□ -1.05
GNE-206ENST00000543356 FCGR1BQ92637 280 aa8.5□□□□□ -1.05
GNE-206ENST00000543356 RASL10BQ96S79 203 aa8.5□□□□□ -1.05
GNE-206ENST00000543356 PHOX2BQ99453 314 aa8.5□□□□□ -1.05
GNE-206ENST00000543356 LRFN3Q9BTN0 628 aa8.5□□□□□ -1.05
GNE-206ENST00000543356 UBQLN3Q9H347 655 aa8.5□□□□□ -1.05
GNE-206ENST00000543356 HHATLQ9HCP6 504 aa8.5□□□□□ -1.05
GNE-206ENST00000543356 ACOT13Q9NPJ3 140 aa8.5□□□□□ -1.05
GNE-206ENST00000543356 DNAJC27Q9NZQ0 273 aa8.5□□□□□ -1.05
GNE-206ENST00000543356 BAIAP2Q9UQB8 552 aa8.5□□□□□ -1.05
GNE-206ENST00000543356 FARSAQ9Y285 508 aaKnown RBP8.5□□□□□ -1.05
GNE-206ENST00000543356 RPL36Q9Y3U8 105 aaKnown RBP8.5□□□□□ -1.05
GNE-206ENST00000543356 PCDHGB6Q9Y5F9 930 aa8.5□□□□□ -1.05
GNE-206ENST00000543356 ZNF99A8MXY4 864 aaPredicted RBP8.5□□□□□ -1.05
GNE-206ENST00000543356 C21orf140B9A014 251 aa8.5□□□□□ -1.05
GNE-206ENST00000543356 BHLHE40O14503 412 aa8.5□□□□□ -1.05
GNE-206ENST00000543356 OR7A10O76100 309 aa8.5□□□□□ -1.05
GNE-206ENST00000543356 FUT1P19526 365 aa8.5□□□□□ -1.05
GNE-206ENST00000543356 DCKP27707 260 aa8.5□□□□□ -1.05
GNE-206ENST00000543356 ZNF91Q05481 1191 aa8.5□□□□□ -1.05
GNE-206ENST00000543356 C17orf67Q0P5P2 114 aa8.5□□□□□ -1.05
GNE-206ENST00000543356 FHL1Q13642 323 aa8.5□□□□□ -1.05
GNE-206ENST00000543356 IRF3Q14653 427 aa8.5□□□□□ -1.05
GNE-206ENST00000543356 SSPNQ14714 243 aa8.5□□□□□ -1.05
GNE-206ENST00000543356 C3orf38Q5JPI3 329 aa8.5□□□□□ -1.05
GNE-206ENST00000543356 SLC46A3Q7Z3Q1 461 aa8.5□□□□□ -1.05
GNE-206ENST00000543356 DND1Q8IYX4 353 aaKnown RBP8.5□□□□□ -1.05
GNE-206ENST00000543356 LNX2Q8N448 690 aa8.5□□□□□ -1.05
GNE-206ENST00000543356 C9orf43Q8TAL5 461 aaPredicted RBP8.5□□□□□ -1.05
GNE-206ENST00000543356 ZNF420Q8TAQ5 688 aaPredicted RBP8.5□□□□□ -1.05
GNE-206ENST00000543356 LIPHQ8WWY8 451 aa8.5□□□□□ -1.05
GNE-206ENST00000543356 HPS1Q92902 700 aa8.5□□□□□ -1.05
GNE-206ENST00000543356 BORCS5Q969J3 196 aa8.5□□□□□ -1.05
GNE-206ENST00000543356 SPACA9Q96E40 222 aaPredicted RBP8.5□□□□□ -1.05
GNE-206ENST00000543356 LRR1Q96L50 414 aa8.5□□□□□ -1.05
GNE-206ENST00000543356 ZNF582Q96NG8 517 aaPredicted RBP8.5□□□□□ -1.05
GNE-206ENST00000543356 LHPPQ9H008 270 aa8.5□□□□□ -1.05
GNE-206ENST00000543356 MCCC2Q9HCC0 563 aa8.5□□□□□ -1.05
GNE-206ENST00000543356 PALMDQ9NP74 551 aa8.5□□□□□ -1.05
GNE-206ENST00000543356 GPR179Q6PRD1 2367 aa8.49□□□□□ -1.05
GNE-206ENST00000543356 IGLV3-32A0A0A0MS00 114 aa8.49□□□□□ -1.05
GNE-206ENST00000543356 ANKUB1A6NFN9 424 aa8.49□□□□□ -1.05
GNE-206ENST00000543356 SNTNA6NMZ2 147 aa8.49□□□□□ -1.05
GNE-206ENST00000543356 J3QRK9 145 aa8.49□□□□□ -1.05
GNE-206ENST00000543356 TERTO14746 1132 aaKnown RBP8.49□□□□□ -1.05
GNE-206ENST00000543356 GNB5O14775 395 aa8.49□□□□□ -1.05
GNE-206ENST00000543356 PRODHO43272 600 aa8.49□□□□□ -1.05
GNE-206ENST00000543356 FADS2O95864 444 aaKnown RBP8.49□□□□□ -1.05
GNE-206ENST00000543356 HPP00738 406 aa8.49□□□□□ -1.05
GNE-206ENST00000543356 DBTP11182 482 aaKnown RBP8.49□□□□□ -1.05
GNE-206ENST00000543356 GP1BBP13224 206 aa8.49□□□□□ -1.05
GNE-206ENST00000543356 TACR3P29371 465 aa8.49□□□□□ -1.05
GNE-206ENST00000543356 MAP2K4P45985 399 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms