RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 CACNG2Q9Y698 323 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 RNF215Q9Y6U7 377 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 MYO9BQ13459 2157 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 TRAV27A0A087WT01 109 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 LOC105369274A0A096LPK9 316 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 NPIPA5A0A0B4J1W7 369 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 A0A1B0GWA3 101 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 A0A1W2PQF6 199 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 GXYLT2A0PJZ3 443 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 PRR23AA6NEV1 266 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 NOTOA8MTQ0 251 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 NPIPA7E9PJI5 369 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 H0YGG7 62 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 TNFRSF10CO14798 259 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 SCAMP1O15126 338 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 CTDSPLO15194 276 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 ARHGEF9O43307 516 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 ZNF749O43361 778 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 AKR7A2O43488 359 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 GSTZ1O43708 216 aaPredicted RBP4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 GALR3O60755 368 aaPredicted RBP4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 ADAM11O75078 769 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 FZD7O75084 574 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 OR2B3O76000 313 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 UBL3O95164 117 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 PPP1R3DO95685 299 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 APBB3O95704 486 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 CBX7O95931 251 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 NGFRP08138 427 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 UCHL1P09936 223 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 CT62P0C5K7 136 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 NPIPA8P0DM63 369 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 CLUP10909 449 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 ZNF3P17036 446 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 S1PR1P21453 382 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 AK4P27144 223 aaPredicted RBP4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 MAT2AP31153 395 aaKnown RBP4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 SLC6A6P31641 620 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 ACAA2P42765 397 aaKnown RBP4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 INPP1P49441 399 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 RAG2P55895 527 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 ARF3P61204 181 aaPredicted RBP4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 RPS11P62280 158 aaKnown RBP eCLIP4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 PPP2CBP62714 309 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 PPP2CAP67775 309 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 POU6F2P78424 691 aaPredicted RBP4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 ID2Q02363 134 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 RPL6Q02878 288 aaKnown RBP4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 SLC3A1Q07837 685 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 GPM6BQ13491 265 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 TCEA2Q15560 299 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 NTRK2Q16620 822 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 BTBD16Q32M84 506 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 SLC25A35Q3KQZ1 300 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 CDONQ4KMG0 1287 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 ACSM3Q53FZ2 586 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 KLHL12Q53G59 568 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 HSD17B12Q53GQ0 312 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 PRRT3Q5FWE3 981 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 TMEM196Q5HYL7 178 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 ARHGAP11AQ6P4F7 1023 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 UNQ9370/PRO34162Q6UXP9 181 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 BAIAP2L2Q6UXY1 529 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 RTL4Q6ZR62 310 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 SSX6Q7RTT6 188 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 OVCH1Q7RTY7 1134 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 NANOGNBQ7Z5D8 188 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 ZAR1Q86SH2 424 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 YAF2Q8IY57 180 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 OR4N4Q8N0Y3 316 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 SHISA5Q8N114 240 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 CA13Q8N1Q1 262 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 OR5J2Q8NH18 312 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 OR4C6Q8NH72 309 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 CCL4L1Q8NHW4 92 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 ANGPTL6Q8NI99 470 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 RPS4Y2Q8TD47 263 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 CNOT9Q92600 299 aaKnown RBP4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 GHSRQ92847 366 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 YIPF5Q969M3 257 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 ELSPBP1Q96BH3 223 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 ANKRD9Q96BM1 317 aaPredicted RBP4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 ABHD17AQ96GS6 310 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 ART5Q96L15 291 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 BMFQ96LC9 184 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 CMTM3Q96MX0 182 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 WDR92Q96MX6 357 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 GPR137Q96N19 417 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 TNFRSF13CQ96RJ3 184 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 MYADMQ96S97 322 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 DDOQ99489 341 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 ZFYVE21Q9BQ24 234 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 C7orf50Q9BRJ6 194 aaKnown RBP4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 LMF2Q9BU23 707 aaKnown RBP4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 SLC6A17Q9H1V8 727 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 ABCG5Q9H222 651 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 TMEM27Q9HBJ8 222 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 EMC7Q9NPA0 242 aa4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 DNAJB12Q9NXW2 375 aaKnown RBP4.78□□□□□ -1.64
ATPAF1-212ENST00000542495 SLCO1C1Q9NYB5 712 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms