RNA–Protein interactions for RNA: ENST00000542136.1

TNFSF13B-206, Transcript of TNF superfamily member 13b, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13B, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-206ENST00000542136 NRF1Q16656 503 aa12.3□□□□□ -0.44
TNFSF13B-206ENST00000542136 ULK3Q6PHR2 472 aa12.3□□□□□ -0.44
TNFSF13B-206ENST00000542136 ATG4DQ86TL0 474 aaPredicted RBP12.3□□□□□ -0.44
TNFSF13B-206ENST00000542136 RANBP3LQ86VV4 465 aaPredicted RBP12.3□□□□□ -0.44
TNFSF13B-206ENST00000542136 MCEMP1Q8IX19 187 aa12.3□□□□□ -0.44
TNFSF13B-206ENST00000542136 ATP6V1C2Q8NEY4 427 aa12.3□□□□□ -0.44
TNFSF13B-206ENST00000542136 STK35Q8TDR2 534 aa12.3□□□□□ -0.44
TNFSF13B-206ENST00000542136 SLC26A7Q8TE54 656 aa12.3□□□□□ -0.44
TNFSF13B-206ENST00000542136 SLC38A4Q969I6 547 aa12.3□□□□□ -0.44
TNFSF13B-206ENST00000542136 C3orf49Q96BT1 292 aa12.3□□□□□ -0.44
TNFSF13B-206ENST00000542136 C14orf79Q96F83 325 aa12.3□□□□□ -0.44
TNFSF13B-206ENST00000542136 SRXN1Q9BYN0 137 aa12.3□□□□□ -0.44
TNFSF13B-206ENST00000542136 PCDHAC1Q9H158 963 aa12.3□□□□□ -0.44
TNFSF13B-206ENST00000542136 PIF1Q9H611 641 aa12.3□□□□□ -0.44
TNFSF13B-206ENST00000542136 BCO1Q9HAY6 547 aa12.3□□□□□ -0.44
TNFSF13B-206ENST00000542136 CMTM6Q9NX76 183 aa12.3□□□□□ -0.44
TNFSF13B-206ENST00000542136 KLHL9Q9P2J3 617 aa12.3□□□□□ -0.44
TNFSF13B-206ENST00000542136 KCNN3Q9UGI6 736 aa12.3□□□□□ -0.44
TNFSF13B-206ENST00000542136 BAG5Q9UL15 447 aa12.3□□□□□ -0.44
TNFSF13B-206ENST00000542136 INTS1Q8N201 2190 aaKnown RBP12.3□□□□□ -0.44
TNFSF13B-206ENST00000542136 IGKV3D-15A0A087WSY6 115 aa12.29□□□□□ -0.44
TNFSF13B-206ENST00000542136 A0A1W2PNR3 127 aa12.29□□□□□ -0.44
TNFSF13B-206ENST00000542136 ELOVL7A1L3X0 281 aa12.29□□□□□ -0.44
TNFSF13B-206ENST00000542136 TMEM229AB2RXF0 380 aa12.29□□□□□ -0.44
TNFSF13B-206ENST00000542136 FZD7O75084 574 aa12.29□□□□□ -0.44
TNFSF13B-206ENST00000542136 CD247P20963 164 aa12.29□□□□□ -0.44
TNFSF13B-206ENST00000542136 KDELR2P33947 212 aa12.29□□□□□ -0.44
TNFSF13B-206ENST00000542136 NUDT2P50583 147 aa12.29□□□□□ -0.44
TNFSF13B-206ENST00000542136 RGS8P57771 180 aaPredicted RBP12.29□□□□□ -0.44
TNFSF13B-206ENST00000542136 KRT72Q14CN4 511 aa12.29□□□□□ -0.44
TNFSF13B-206ENST00000542136 SPATS1Q496A3 300 aa12.29□□□□□ -0.44
TNFSF13B-206ENST00000542136 GLIPR1L2Q4G1C9 344 aa12.29□□□□□ -0.44
TNFSF13B-206ENST00000542136 ZNF613Q6PF04 617 aa12.29□□□□□ -0.44
TNFSF13B-206ENST00000542136 PLXDC2Q6UX71 529 aa12.29□□□□□ -0.44
TNFSF13B-206ENST00000542136 MEX3BQ6ZN04 569 aaKnown RBP12.29□□□□□ -0.44
TNFSF13B-206ENST00000542136 BTLAQ7Z6A9 289 aa12.29□□□□□ -0.44
TNFSF13B-206ENST00000542136 MICU2Q8IYU8 434 aa12.29□□□□□ -0.44
TNFSF13B-206ENST00000542136 CADM2Q8N3J6 435 aa12.29□□□□□ -0.44
TNFSF13B-206ENST00000542136 CNEP1R1Q8N9A8 125 aa12.29□□□□□ -0.44
TNFSF13B-206ENST00000542136 OR52E4Q8NGH9 312 aa12.29□□□□□ -0.44
TNFSF13B-206ENST00000542136 MARVELD3Q96A59 401 aa12.29□□□□□ -0.44
TNFSF13B-206ENST00000542136 TAMM41Q96BW9 452 aa12.29□□□□□ -0.44
TNFSF13B-206ENST00000542136 SLC47A1Q96FL8 570 aa12.29□□□□□ -0.44
TNFSF13B-206ENST00000542136 ARL5BQ96KC2 179 aa12.29□□□□□ -0.44
TNFSF13B-206ENST00000542136 ARHGDIGQ99819 225 aa12.29□□□□□ -0.44
TNFSF13B-206ENST00000542136 TMEM27Q9HBJ8 222 aa12.29□□□□□ -0.44
TNFSF13B-206ENST00000542136 FANCFQ9NPI8 374 aa12.29□□□□□ -0.44
TNFSF13B-206ENST00000542136 KLHL13Q9P2N7 655 aa12.29□□□□□ -0.44
TNFSF13B-206ENST00000542136 ABCD2Q9UBJ2 740 aa12.29□□□□□ -0.44
TNFSF13B-206ENST00000542136 RPS6KB2Q9UBS0 482 aa12.29□□□□□ -0.44
TNFSF13B-206ENST00000542136 TMEM72A0PK05 275 aa12.28□□□□□ -0.44
TNFSF13B-206ENST00000542136 EEF1E1-BLOC1S5C9J1V9 151 aa12.28□□□□□ -0.44
TNFSF13B-206ENST00000542136 GPR171O14626 319 aa12.28□□□□□ -0.44
TNFSF13B-206ENST00000542136 SMAD9O15198 467 aaKnown RBP12.28□□□□□ -0.44
TNFSF13B-206ENST00000542136 EEF1E1O43324 174 aaKnown RBP12.28□□□□□ -0.44
TNFSF13B-206ENST00000542136 OR2T1O43869 369 aa12.28□□□□□ -0.44
TNFSF13B-206ENST00000542136 GOSR1O95249 250 aa12.28□□□□□ -0.44
TNFSF13B-206ENST00000542136 CNOT4O95628 575 aaKnown RBP12.28□□□□□ -0.44
TNFSF13B-206ENST00000542136 GPIP06744 558 aa12.28□□□□□ -0.44
TNFSF13B-206ENST00000542136 FESP07332 822 aa12.28□□□□□ -0.44
TNFSF13B-206ENST00000542136 AGTR1P30556 359 aa12.28□□□□□ -0.44
TNFSF13B-206ENST00000542136 CRYBA2P53672 197 aa12.28□□□□□ -0.44
TNFSF13B-206ENST00000542136 SLC16A1P53985 500 aa12.28□□□□□ -0.44
TNFSF13B-206ENST00000542136 NCALDP61601 193 aa12.28□□□□□ -0.44
TNFSF13B-206ENST00000542136 LIPEQ05469 1076 aa12.28□□□□□ -0.44
TNFSF13B-206ENST00000542136 TMEM201Q5SNT2 666 aa12.28□□□□□ -0.44
TNFSF13B-206ENST00000542136 ZNF787Q6DD87 383 aa12.28□□□□□ -0.44
TNFSF13B-206ENST00000542136 PAQR6Q6TCH4 344 aa12.28□□□□□ -0.44
TNFSF13B-206ENST00000542136 STK32CQ86UX6 486 aa12.28□□□□□ -0.44
TNFSF13B-206ENST00000542136 COMTD1Q86VU5 262 aa12.28□□□□□ -0.44
TNFSF13B-206ENST00000542136 SMYD1Q8NB12 490 aa12.28□□□□□ -0.44
TNFSF13B-206ENST00000542136 GPR32P1Q8NGA4 272 aa12.28□□□□□ -0.44
TNFSF13B-206ENST00000542136 OR6S1Q8NH40 331 aa12.28□□□□□ -0.44
TNFSF13B-206ENST00000542136 MFSD8Q8NHS3 518 aa12.28□□□□□ -0.44
TNFSF13B-206ENST00000542136 PIGXQ8TBF5 258 aa12.28□□□□□ -0.44
TNFSF13B-206ENST00000542136 ROBO4Q8WZ75 1007 aa12.28□□□□□ -0.44
TNFSF13B-206ENST00000542136 NAA11Q9BSU3 229 aaPredicted RBP12.28□□□□□ -0.44
TNFSF13B-206ENST00000542136 RBM24Q9BX46 236 aaKnown RBP12.28□□□□□ -0.44
TNFSF13B-206ENST00000542136 OR11A1Q9GZK7 315 aa12.28□□□□□ -0.44
TNFSF13B-206ENST00000542136 POLR2J2Q9GZM3 115 aaKnown RBP12.28□□□□□ -0.44
TNFSF13B-206ENST00000542136 POLR2J3Q9H1A7 115 aaKnown RBP12.28□□□□□ -0.44
TNFSF13B-206ENST00000542136 SPAG4Q9NPE6 437 aa12.28□□□□□ -0.44
TNFSF13B-206ENST00000542136 NDE1Q9NXR1 346 aa12.28□□□□□ -0.44
TNFSF13B-206ENST00000542136 EMC3Q9P0I2 261 aa12.28□□□□□ -0.44
TNFSF13B-206ENST00000542136 TAGLN3Q9UI15 199 aa12.28□□□□□ -0.44
TNFSF13B-206ENST00000542136 PROCRQ9UNN8 238 aa12.28□□□□□ -0.44
TNFSF13B-206ENST00000542136 SLC9A8Q9Y2E8 581 aa12.28□□□□□ -0.44
TNFSF13B-206ENST00000542136 UNC79Q9P2D8 2635 aa12.28□□□□□ -0.44
TNFSF13B-206ENST00000542136 A0A087WUJ7 227 aa12.27□□□□□ -0.45
TNFSF13B-206ENST00000542136 A0A0B4J2E0 115 aa12.27□□□□□ -0.45
TNFSF13B-206ENST00000542136 A0A1B0GWA3 101 aa12.27□□□□□ -0.45
TNFSF13B-206ENST00000542136 A0A1B0GX12 115 aa12.27□□□□□ -0.45
TNFSF13B-206ENST00000542136 LIPT2A6NK58 231 aa12.27□□□□□ -0.45
TNFSF13B-206ENST00000542136 ELOA3DA6NLF2 546 aaPredicted RBP12.27□□□□□ -0.45
TNFSF13B-206ENST00000542136 CCT8L1PA6NM43 557 aa12.27□□□□□ -0.45
TNFSF13B-206ENST00000542136 NME4O00746 187 aa12.27□□□□□ -0.45
TNFSF13B-206ENST00000542136 FRS3O43559 492 aa12.27□□□□□ -0.45
TNFSF13B-206ENST00000542136 TPST2O60704 377 aa12.27□□□□□ -0.45
TNFSF13B-206ENST00000542136 HTR2AP28223 471 aa12.27□□□□□ -0.45
TNFSF13B-206ENST00000542136 SSTR2P30874 369 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms