RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 SRSF1Q07955 248 aaKnown RBP eCLIP13.9□□□□□ -0.18
DDB1-218ENST00000540784 TRAP1Q12931 704 aaKnown RBP13.9□□□□□ -0.18
DDB1-218ENST00000540784 MYBPHQ13203 477 aa13.9□□□□□ -0.18
DDB1-218ENST00000540784 PON3Q15166 354 aa13.9□□□□□ -0.18
DDB1-218ENST00000540784 SWT1Q5T5J6 900 aaKnown RBP13.9□□□□□ -0.18
DDB1-218ENST00000540784 RIPPLY2Q5TAB7 128 aa13.9□□□□□ -0.18
DDB1-218ENST00000540784 GTF2IRD2BQ6EKJ0 949 aa13.9□□□□□ -0.18
DDB1-218ENST00000540784 PGM2L1Q6PCE3 622 aa13.9□□□□□ -0.18
DDB1-218ENST00000540784 PLXDC2Q6UX71 529 aa13.9□□□□□ -0.18
DDB1-218ENST00000540784 CYP2R1Q6VVX0 501 aa13.9□□□□□ -0.18
DDB1-218ENST00000540784 SEM1Q6ZVN7 128 aa13.9□□□□□ -0.18
DDB1-218ENST00000540784 GTF2IRD2Q86UP8 949 aa13.9□□□□□ -0.18
DDB1-218ENST00000540784 FNDC9Q8TBE3 224 aa13.9□□□□□ -0.18
DDB1-218ENST00000540784 STK35Q8TDR2 534 aa13.9□□□□□ -0.18
DDB1-218ENST00000540784 CPNE4Q96A23 557 aaPredicted RBP13.9□□□□□ -0.18
DDB1-218ENST00000540784 MCUR1Q96AQ8 359 aa13.9□□□□□ -0.18
DDB1-218ENST00000540784 ARL5BQ96KC2 179 aa13.9□□□□□ -0.18
DDB1-218ENST00000540784 CADM1Q9BY67 442 aaKnown RBP13.9□□□□□ -0.18
DDB1-218ENST00000540784 AMBRA1Q9C0C7 1298 aa13.9□□□□□ -0.18
DDB1-218ENST00000540784 POLR2J2Q9GZM3 115 aaKnown RBP13.9□□□□□ -0.18
DDB1-218ENST00000540784 POLR2J3Q9H1A7 115 aaKnown RBP13.9□□□□□ -0.18
DDB1-218ENST00000540784 COQ3Q9NZJ6 369 aa13.9□□□□□ -0.18
DDB1-218ENST00000540784 CLCF1Q9UBD9 225 aa13.9□□□□□ -0.18
DDB1-218ENST00000540784 RIMS3Q9UJD0 308 aa13.9□□□□□ -0.18
DDB1-218ENST00000540784 MED12Q93074 2177 aa13.9□□□□□ -0.18
DDB1-218ENST00000540784 A0A087WUJ7 227 aa13.89□□□□□ -0.19
DDB1-218ENST00000540784 ZC3H12DA2A288 527 aaKnown RBP13.89□□□□□ -0.19
DDB1-218ENST00000540784 MBD3L4A6NDZ8 208 aaPredicted RBP13.89□□□□□ -0.19
DDB1-218ENST00000540784 MBD3L3A6NE82 208 aaPredicted RBP13.89□□□□□ -0.19
DDB1-218ENST00000540784 MBD3L5A6NJ08 208 aaPredicted RBP13.89□□□□□ -0.19
DDB1-218ENST00000540784 HSPB2A8KAH6 182 aa13.89□□□□□ -0.19
DDB1-218ENST00000540784 ZG16O60844 167 aa13.89□□□□□ -0.19
DDB1-218ENST00000540784 RCBTB2O95199 551 aa13.89□□□□□ -0.19
DDB1-218ENST00000540784 PMS2P2O95744 297 aa13.89□□□□□ -0.19
DDB1-218ENST00000540784 ENPP1P22413 925 aa13.89□□□□□ -0.19
DDB1-218ENST00000540784 CEACAM8P31997 349 aaPredicted RBP13.89□□□□□ -0.19
DDB1-218ENST00000540784 ADORA2A-AS1P86434 159 aa13.89□□□□□ -0.19
DDB1-218ENST00000540784 PIN1Q13526 163 aaPredicted RBP13.89□□□□□ -0.19
DDB1-218ENST00000540784 HSPB2Q16082 182 aa13.89□□□□□ -0.19
DDB1-218ENST00000540784 OR2A2Q6IF42 318 aa13.89□□□□□ -0.19
DDB1-218ENST00000540784 GDF7Q7Z4P5 450 aa13.89□□□□□ -0.19
DDB1-218ENST00000540784 MRGPRGQ86SM5 289 aa13.89□□□□□ -0.19
DDB1-218ENST00000540784 C9orf106Q8NAJ2 232 aa13.89□□□□□ -0.19
DDB1-218ENST00000540784 MBD3L2Q8NHZ7 208 aaPredicted RBP13.89□□□□□ -0.19
DDB1-218ENST00000540784 ROBO4Q8WZ75 1007 aa13.89□□□□□ -0.19
DDB1-218ENST00000540784 CCDC124Q96CT7 223 aaKnown RBP13.89□□□□□ -0.19
DDB1-218ENST00000540784 ASB9Q96DX5 294 aa13.89□□□□□ -0.19
DDB1-218ENST00000540784 DNAJA3Q96EY1 480 aa13.89□□□□□ -0.19
DDB1-218ENST00000540784 SLC41A3Q96GZ6 507 aa13.89□□□□□ -0.19
DDB1-218ENST00000540784 LRGUKQ96M69 825 aa13.89□□□□□ -0.19
DDB1-218ENST00000540784 SRXN1Q9BYN0 137 aa13.89□□□□□ -0.19
DDB1-218ENST00000540784 COQ10BQ9H8M1 238 aa13.89□□□□□ -0.19
DDB1-218ENST00000540784 SLC7A7Q9UM01 511 aa13.89□□□□□ -0.19
DDB1-218ENST00000540784 FAM32AQ9Y421 112 aaKnown RBP13.89□□□□□ -0.19
DDB1-218ENST00000540784 V9GYQ6 96 aa13.89□□□□□ -0.19
DDB1-218ENST00000540784 A0A0G2JNJ9 132 aa13.88□□□□□ -0.19
DDB1-218ENST00000540784 CLEC18AA5D8T8 446 aa13.88□□□□□ -0.19
DDB1-218ENST00000540784 WIPF3A6NGB9 483 aa13.88□□□□□ -0.19
DDB1-218ENST00000540784 CHP2O43745 196 aa13.88□□□□□ -0.19
DDB1-218ENST00000540784 TOXO94900 526 aa13.88□□□□□ -0.19
DDB1-218ENST00000540784 OR5F1O95221 314 aa13.88□□□□□ -0.19
DDB1-218ENST00000540784 LDLRP01130 860 aa13.88□□□□□ -0.19
DDB1-218ENST00000540784 FCGR2AP12318 317 aa13.88□□□□□ -0.19
DDB1-218ENST00000540784 IDUAP35475 653 aa13.88□□□□□ -0.19
DDB1-218ENST00000540784 YAP1P46937 504 aaKnown RBP13.88□□□□□ -0.19
DDB1-218ENST00000540784 SLC35A1P78382 337 aa13.88□□□□□ -0.19
DDB1-218ENST00000540784 FOXD4Q12950 439 aaPredicted RBP13.88□□□□□ -0.19
DDB1-218ENST00000540784 MTX3Q5HYI7 312 aa13.88□□□□□ -0.19
DDB1-218ENST00000540784 EEF1A1P5Q5VTE0 462 aa13.88□□□□□ -0.19
DDB1-218ENST00000540784 C1orf140Q5VVS0 124 aa13.88□□□□□ -0.19
DDB1-218ENST00000540784 LCN8Q6JVE9 175 aa13.88□□□□□ -0.19
DDB1-218ENST00000540784 TTC33Q6PID6 262 aaPredicted RBP13.88□□□□□ -0.19
DDB1-218ENST00000540784 XKRXQ6PP77 449 aa13.88□□□□□ -0.19
DDB1-218ENST00000540784 C5orf46Q6UWT4 87 aa13.88□□□□□ -0.19
DDB1-218ENST00000540784 CLEC18BQ6UXF7 455 aa13.88□□□□□ -0.19
DDB1-218ENST00000540784 LINC00114Q6XXX2 140 aa13.88□□□□□ -0.19
DDB1-218ENST00000540784 TSPYL5Q86VY4 417 aaPredicted RBP13.88□□□□□ -0.19
DDB1-218ENST00000540784 CYP4Z1Q86W10 505 aa13.88□□□□□ -0.19
DDB1-218ENST00000540784 CCDC71Q8IV32 467 aaPredicted RBP13.88□□□□□ -0.19
DDB1-218ENST00000540784 CLEC18CQ8NCF0 446 aa13.88□□□□□ -0.19
DDB1-218ENST00000540784 SSC4DQ8WTU2 575 aa13.88□□□□□ -0.19
DDB1-218ENST00000540784 ASB5Q8WWX0 329 aa13.88□□□□□ -0.19
DDB1-218ENST00000540784 POP5Q969H6 163 aaKnown RBP13.88□□□□□ -0.19
DDB1-218ENST00000540784 SDCCAG3Q96C92 435 aa13.88□□□□□ -0.19
DDB1-218ENST00000540784 ZHX1-C8orf76Q96EF9 292 aa13.88□□□□□ -0.19
DDB1-218ENST00000540784 MPP4Q96JB8 637 aa13.88□□□□□ -0.19
DDB1-218ENST00000540784 FNDC11Q9BVV2 318 aa13.88□□□□□ -0.19
DDB1-218ENST00000540784 TAPBPLQ9BX59 468 aa13.88□□□□□ -0.19
DDB1-218ENST00000540784 MMADHCQ9H3L0 296 aaPredicted RBP13.88□□□□□ -0.19
DDB1-218ENST00000540784 Q9UFV3 132 aa13.88□□□□□ -0.19
DDB1-218ENST00000540784 RNF6Q9Y252 685 aa13.88□□□□□ -0.19
DDB1-218ENST00000540784 ACOT8O14734 319 aa13.87□□□□□ -0.19
DDB1-218ENST00000540784 OR2T1O43869 369 aa13.87□□□□□ -0.19
DDB1-218ENST00000540784 NPIPB7O75200 414 aa13.87□□□□□ -0.19
DDB1-218ENST00000540784 AQP8O94778 261 aa13.87□□□□□ -0.19
DDB1-218ENST00000540784 LYPD3O95274 346 aa13.87□□□□□ -0.19
DDB1-218ENST00000540784 AHSA1O95433 338 aa13.87□□□□□ -0.19
DDB1-218ENST00000540784 THY1P04216 161 aa13.87□□□□□ -0.19
DDB1-218ENST00000540784 GPIP06744 558 aa13.87□□□□□ -0.19
DDB1-218ENST00000540784 TMIGD3P0DMS9 266 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms