RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 GOSR2O14653 212 aa8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 FFAR1O14842 300 aa8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 OR10H3O60404 316 aa8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 TBL1XO60907 577 aa8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 FARS2O95363 451 aaKnown RBP8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 GKN3PP0CG01 181 aa8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 ADRB3P13945 408 aa8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 PKMP14618 531 aaKnown RBP8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 NME1P15531 152 aaKnown RBP8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 CDKN1CP49918 316 aaPredicted RBP8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 ZNF77Q15935 545 aa8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 ZNF239Q16600 458 aaKnown RBP8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 CPSF6Q16630 551 aaKnown RBP eCLIP8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 ZNF791Q3KP31 576 aaPredicted RBP8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 FAM27D1Q5T7N8 215 aa8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 ACSM5Q6NUN0 579 aa8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 SBSNQ6UWP8 590 aa8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 APOOLQ6UXV4 268 aa8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 IZUMO1Q8IYV9 350 aa8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 UMODL1-AS1Q8N2C9 162 aa8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 MYLIPQ8WY64 445 aa8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 FGF11Q92914 225 aa8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 HMCESQ96FZ2 354 aa8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 APIPQ96GX9 242 aa8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 APOLD1Q96LR9 279 aa8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 PKP4Q99569 1192 aa8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 TEAD3Q99594 435 aa8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 METTL9Q9H1A3 318 aa8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 UQCC1Q9NVA1 299 aa8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 A0A0G2JK05 382 aa8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 RFPL4AA6NLU0 287 aa8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 ZNF705EA8MWA4 302 aaPredicted RBP8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 RFPL4AL1F8VTS6 287 aa8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 H7C0S8 307 aa8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 MT-ND4LP03901 98 aa8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 COX7A2P14406 83 aa8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 RAB4AP20338 218 aa8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 AVPR2P30518 371 aa8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 ACVRL1P37023 503 aa8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 MAPK9P45984 424 aa8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 ASMTP46597 345 aa8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 MTNR1AP48039 350 aa8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 ANXA11P50995 505 aaKnown RBP8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 F2RL1P55085 397 aa8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 SRSF11Q05519 484 aaKnown RBP8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 GAB1Q13480 694 aa8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 COTL1Q14019 142 aa8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 LINC00303Q3SY05 128 aa8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 CTSL3PQ5NE16 218 aa8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 LIPJQ5W064 366 aa8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 JMJD6Q6NYC1 403 aaPredicted RBP8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 Q7L0L9 218 aa8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 TMEM200AQ86VY9 491 aa8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 OR4F15Q8NGB8 312 aa8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 OR6X1Q8NH79 312 aa8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 SPRYD4Q8WW59 207 aaPredicted RBP8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 ASB16Q96NS5 453 aa8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 EBPLQ9BY08 206 aa8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 TWSG1Q9GZX9 223 aa8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 FAM120CQ9NX05 1096 aaKnown RBP8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 CLEC4EQ9ULY5 219 aa8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 CAMK2AQ9UQM7 478 aa8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 WNT6Q9Y6F9 365 aa8.77□□□□□ -1.01
CTNNA1-243ENST00000540387 OBSL1O75147 1896 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 A0A0D9SG52 128 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 KANTRA0A1W2PQU2 76 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 C1orf226A1L170 272 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 PGRMC2O15173 223 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 PRODHO43272 600 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 MBTPS2O43462 519 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 RAMP2O60895 175 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 CLDN11O75508 207 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 LAMP1P11279 417 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 PRPS1L1P21108 318 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 GALP22466 123 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 CERS1P27544 350 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 CRATP43155 626 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 UBE2MP61081 183 aaKnown RBP8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 SLC10A7Q0GE19 358 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 ZNF177Q13360 481 aaPredicted RBP8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 DHCR24Q15392 516 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 TGIF1Q15583 401 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 COX20Q5RI15 118 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 SMARCD3Q6STE5 483 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 ETV3LQ6ZN32 361 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 ZNF546Q86UE3 836 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 TMEM25Q86YD3 366 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 OR4D9Q8NGE8 314 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 OR5T3Q8NGG3 340 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 OR4A4PQ8NGN8 299 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 NFKBIDQ8NI38 313 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 PHYHIPLQ96FC7 376 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 CPNE2Q96FN4 548 aaPredicted RBP8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 MESP1Q9BRJ9 268 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 SUCNR1Q9BXA5 334 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 RIMS4Q9H426 269 aaPredicted RBP8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 KCND3Q9UK17 655 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 DENND4CQ5VZ89 1909 aa8.76□□□□□ -1.01
CTNNA1-243ENST00000540387 CKAP5Q14008 2032 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms