RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 MTDHQ86UE4 582 aaKnown RBP11.7□□□□□ -0.54
PRKDC-206ENST00000536429 GTF2IRD2Q86UP8 949 aa11.7□□□□□ -0.54
PRKDC-206ENST00000536429 SNX32Q86XE0 403 aa11.7□□□□□ -0.54
PRKDC-206ENST00000536429 CCDC103Q8IW40 242 aa11.7□□□□□ -0.54
PRKDC-206ENST00000536429 C3orf49Q96BT1 292 aa11.7□□□□□ -0.54
PRKDC-206ENST00000536429 DACH2Q96NX9 599 aa11.7□□□□□ -0.54
PRKDC-206ENST00000536429 POLDIP3Q9BY77 421 aaKnown RBP11.7□□□□□ -0.54
PRKDC-206ENST00000536429 CLEC4MQ9H2X3 399 aaPredicted RBP11.7□□□□□ -0.54
PRKDC-206ENST00000536429 PIF1Q9H611 641 aa11.7□□□□□ -0.54
PRKDC-206ENST00000536429 KAT8Q9H7Z6 458 aaKnown RBP11.7□□□□□ -0.54
PRKDC-206ENST00000536429 BCO1Q9HAY6 547 aa11.7□□□□□ -0.54
PRKDC-206ENST00000536429 CACYBPQ9HB71 228 aaKnown RBP11.7□□□□□ -0.54
PRKDC-206ENST00000536429 ELOVL5Q9NYP7 299 aa11.7□□□□□ -0.54
PRKDC-206ENST00000536429 USP22Q9UPT9 525 aa11.7□□□□□ -0.54
PRKDC-206ENST00000536429 CORO2BQ9UQ03 480 aa11.7□□□□□ -0.54
PRKDC-206ENST00000536429 HDGFL3Q9Y3E1 203 aa11.7□□□□□ -0.54
PRKDC-206ENST00000536429 ZNF716A6NP11 495 aa11.69□□□□□ -0.54
PRKDC-206ENST00000536429 C16orf97H3BN30 126 aa11.69□□□□□ -0.54
PRKDC-206ENST00000536429 ZNF208O43345 1280 aa11.69□□□□□ -0.54
PRKDC-206ENST00000536429 PMS2P2O95744 297 aa11.69□□□□□ -0.54
PRKDC-206ENST00000536429 OPN1SWP03999 348 aa11.69□□□□□ -0.54
PRKDC-206ENST00000536429 HRGP04196 525 aa11.69□□□□□ -0.54
PRKDC-206ENST00000536429 UQCRBP14927 111 aa11.69□□□□□ -0.54
PRKDC-206ENST00000536429 NTF4P34130 210 aa11.69□□□□□ -0.54
PRKDC-206ENST00000536429 PCYT1AP49585 367 aa11.69□□□□□ -0.54
PRKDC-206ENST00000536429 SEC24CP53992 1094 aa11.69□□□□□ -0.54
PRKDC-206ENST00000536429 GYS2P54840 703 aa11.69□□□□□ -0.54
PRKDC-206ENST00000536429 CSNK2A1P68400 391 aaPredicted RBP11.69□□□□□ -0.54
PRKDC-206ENST00000536429 TSC22D1Q15714 1073 aa11.69□□□□□ -0.54
PRKDC-206ENST00000536429 CYP51A1Q16850 503 aa11.69□□□□□ -0.54
PRKDC-206ENST00000536429 TRMT5Q32P41 509 aaKnown RBP11.69□□□□□ -0.54
PRKDC-206ENST00000536429 WBP2NLQ6ICG8 309 aa11.69□□□□□ -0.54
PRKDC-206ENST00000536429 NANOGP8Q6NSW7 305 aa11.69□□□□□ -0.54
PRKDC-206ENST00000536429 DHRS4L2Q6PKH6 230 aa11.69□□□□□ -0.54
PRKDC-206ENST00000536429 NET1Q7Z628 596 aaPredicted RBP11.69□□□□□ -0.54
PRKDC-206ENST00000536429 ATG4DQ86TL0 474 aaPredicted RBP11.69□□□□□ -0.54
PRKDC-206ENST00000536429 CDH24Q86UP0 819 aa11.69□□□□□ -0.54
PRKDC-206ENST00000536429 CDC20BQ86Y33 519 aa11.69□□□□□ -0.54
PRKDC-206ENST00000536429 SLC43A2Q8N370 569 aa11.69□□□□□ -0.54
PRKDC-206ENST00000536429 POU5F2Q8N7G0 328 aa11.69□□□□□ -0.54
PRKDC-206ENST00000536429 SMYD1Q8NB12 490 aa11.69□□□□□ -0.54
PRKDC-206ENST00000536429 HIPK4Q8NE63 616 aa11.69□□□□□ -0.54
PRKDC-206ENST00000536429 OR10A6Q8NH74 314 aa11.69□□□□□ -0.54
PRKDC-206ENST00000536429 DDIT4LQ96D03 193 aa11.69□□□□□ -0.54
PRKDC-206ENST00000536429 ZC3HAV1LQ96H79 300 aaKnown RBP11.69□□□□□ -0.54
PRKDC-206ENST00000536429 NANOGQ9H9S0 305 aa11.69□□□□□ -0.54
PRKDC-206ENST00000536429 C6orf203Q9P0P8 240 aaPredicted RBP11.69□□□□□ -0.54
PRKDC-206ENST00000536429 TMEM181Q9P2C4 612 aa11.69□□□□□ -0.54
PRKDC-206ENST00000536429 KLHL9Q9P2J3 617 aa11.69□□□□□ -0.54
PRKDC-206ENST00000536429 PRSS50Q9UI38 385 aa11.69□□□□□ -0.54
PRKDC-206ENST00000536429 CELSR1Q9NYQ6 3014 aa11.69□□□□□ -0.54
PRKDC-206ENST00000536429 ZNF469Q96JG9 3925 aaPredicted RBP11.68□□□□□ -0.54
PRKDC-206ENST00000536429 TMEM229AB2RXF0 380 aa11.68□□□□□ -0.54
PRKDC-206ENST00000536429 MRASO14807 208 aa11.68□□□□□ -0.54
PRKDC-206ENST00000536429 TPST2O60704 377 aa11.68□□□□□ -0.54
PRKDC-206ENST00000536429 MFN2O95140 757 aa11.68□□□□□ -0.54
PRKDC-206ENST00000536429 THBDP07204 575 aa11.68□□□□□ -0.54
PRKDC-206ENST00000536429 FPR1P21462 350 aa11.68□□□□□ -0.54
PRKDC-206ENST00000536429 CXCR1P25024 350 aa11.68□□□□□ -0.54
PRKDC-206ENST00000536429 CLK1P49759 484 aaKnown RBP11.68□□□□□ -0.54
PRKDC-206ENST00000536429 COPZ1P61923 177 aa11.68□□□□□ -0.54
PRKDC-206ENST00000536429 H3F3AP84243 136 aa11.68□□□□□ -0.54
PRKDC-206ENST00000536429 ZSWIM7Q19AV6 140 aa11.68□□□□□ -0.54
PRKDC-206ENST00000536429 KRT73Q86Y46 540 aa11.68□□□□□ -0.54
PRKDC-206ENST00000536429 ARMC8Q8IUR7 673 aa11.68□□□□□ -0.54
PRKDC-206ENST00000536429 GABRG1Q8N1C3 465 aa11.68□□□□□ -0.54
PRKDC-206ENST00000536429 C11orf65Q8NCR3 313 aa11.68□□□□□ -0.54
PRKDC-206ENST00000536429 GPR32P1Q8NGA4 272 aa11.68□□□□□ -0.54
PRKDC-206ENST00000536429 LRRC58Q96CX6 371 aa11.68□□□□□ -0.54
PRKDC-206ENST00000536429 MED18Q9BUE0 208 aa11.68□□□□□ -0.54
PRKDC-206ENST00000536429 ARMC7Q9H6L4 198 aa11.68□□□□□ -0.54
PRKDC-206ENST00000536429 GP6Q9HCN6 339 aa11.68□□□□□ -0.54
PRKDC-206ENST00000536429 NDRG3Q9UGV2 375 aa11.68□□□□□ -0.54
PRKDC-206ENST00000536429 ITGB1BP2Q9UKP3 347 aa11.68□□□□□ -0.54
PRKDC-206ENST00000536429 ANGPT4Q9Y264 503 aa11.68□□□□□ -0.54
PRKDC-206ENST00000536429 CAPN7Q9Y6W3 813 aa11.68□□□□□ -0.54
PRKDC-206ENST00000536429 ANKRD17O75179 2603 aaKnown RBP11.68□□□□□ -0.54
PRKDC-206ENST00000536429 PRR14LQ5THK1 2151 aa11.67□□□□□ -0.54
PRKDC-206ENST00000536429 IGKV3D-15A0A087WSY6 115 aa11.67□□□□□ -0.54
PRKDC-206ENST00000536429 A0A1B0GWA3 101 aa11.67□□□□□ -0.54
PRKDC-206ENST00000536429 LIPT2A6NK58 231 aa11.67□□□□□ -0.54
PRKDC-206ENST00000536429 ZNF724A8MTY0 619 aa11.67□□□□□ -0.54
PRKDC-206ENST00000536429 DEFB108AA8MXU0 73 aa11.67□□□□□ -0.54
PRKDC-206ENST00000536429 NPIPB7O75200 414 aa11.67□□□□□ -0.54
PRKDC-206ENST00000536429 FKBP2P26885 142 aaKnown RBP11.67□□□□□ -0.54
PRKDC-206ENST00000536429 DNAJA1P31689 397 aaKnown RBP11.67□□□□□ -0.54
PRKDC-206ENST00000536429 PCGF2P35227 344 aa11.67□□□□□ -0.54
PRKDC-206ENST00000536429 CRYBA2P53672 197 aa11.67□□□□□ -0.54
PRKDC-206ENST00000536429 RBBP4Q09028 425 aa11.67□□□□□ -0.54
PRKDC-206ENST00000536429 CEACAM7Q14002 265 aa11.67□□□□□ -0.54
PRKDC-206ENST00000536429 OR7A5Q15622 319 aa11.67□□□□□ -0.54
PRKDC-206ENST00000536429 DUSP7Q16829 419 aa11.67□□□□□ -0.54
PRKDC-206ENST00000536429 COQ5Q5HYK3 327 aa11.67□□□□□ -0.54
PRKDC-206ENST00000536429 BEND4Q6ZU67 534 aa11.67□□□□□ -0.54
PRKDC-206ENST00000536429 STK32CQ86UX6 486 aa11.67□□□□□ -0.54
PRKDC-206ENST00000536429 CXorf67Q86X51 503 aaPredicted RBP11.67□□□□□ -0.54
PRKDC-206ENST00000536429 CALHM3Q86XJ0 350 aa11.67□□□□□ -0.54
PRKDC-206ENST00000536429 LURAP1LQ8IV03 231 aa11.67□□□□□ -0.54
PRKDC-206ENST00000536429 P3H2Q8IVL5 708 aa11.67□□□□□ -0.54
PRKDC-206ENST00000536429 OR4D11Q8NGI4 311 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms