RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 TSPYL1Q9H0U9 437 aa0.02□□□□□ -2.41
COPB1-212ENST00000534771 DNTTIP1Q9H147 329 aa0.02□□□□□ -2.41
COPB1-212ENST00000534771 POLR3FQ9H1D9 316 aaPredicted RBP0.02□□□□□ -2.41
COPB1-212ENST00000534771 SLC25A51Q9H1U9 297 aa0.02□□□□□ -2.41
COPB1-212ENST00000534771 VCPKMTQ9H867 229 aa0.02□□□□□ -2.41
COPB1-212ENST00000534771 RNPEPL1Q9HAU8 725 aa0.02□□□□□ -2.41
COPB1-212ENST00000534771 HMG20AQ9NP66 347 aa0.02□□□□□ -2.41
COPB1-212ENST00000534771 ZCCHC3Q9NUD5 404 aaKnown RBP0.02□□□□□ -2.41
COPB1-212ENST00000534771 TMEM106BQ9NUM4 274 aa0.02□□□□□ -2.41
COPB1-212ENST00000534771 DNAJC17Q9NVM6 304 aaKnown RBP0.02□□□□□ -2.41
COPB1-212ENST00000534771 GPATCH2LQ9NWQ4 482 aa0.02□□□□□ -2.41
COPB1-212ENST00000534771 SMPD3Q9NY59 655 aaPredicted RBP0.02□□□□□ -2.41
COPB1-212ENST00000534771 TRAF3IP3Q9Y228 551 aa0.02□□□□□ -2.41
COPB1-212ENST00000534771 SIGLEC9Q9Y336 463 aa0.02□□□□□ -2.41
COPB1-212ENST00000534771 SLC25A15Q9Y619 301 aa0.02□□□□□ -2.41
COPB1-212ENST00000534771 ALG6Q9Y672 507 aa0.02□□□□□ -2.41
COPB1-212ENST00000534771 NFASCO94856 1347 aa0.02□□□□□ -2.41
COPB1-212ENST00000534771 ZMYM6O95789 1325 aa0.02□□□□□ -2.41
COPB1-212ENST00000534771 ARID4BQ4LE39 1312 aaPredicted RBP0.02□□□□□ -2.41
COPB1-212ENST00000534771 IGHV3OR16-8A0A075B7F1 116 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 OR6C65A6NJZ3 312 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 PP2D1A8MPX8 630 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 KIF2AO00139 706 aaPredicted RBP0.01□□□□□ -2.41
COPB1-212ENST00000534771 XPO1O14980 1071 aaKnown RBP0.01□□□□□ -2.41
COPB1-212ENST00000534771 ALOX15BO15296 676 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 ATP6V1G1O75348 118 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 HBQ1P09105 142 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 ZDHHC11BP0C7U3 371 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 C1GALT1C1LP0DN25 315 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 PRPS2P11908 318 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 POU2F1P14859 743 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 VCLP18206 1134 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 XRCC1P18887 633 aaPredicted RBP0.01□□□□□ -2.41
COPB1-212ENST00000534771 NPR2P20594 1047 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 CXCR2P25025 360 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 OPRK1P41145 380 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 MAGEA4P43358 317 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 SMSP52788 366 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 BIDP55957 195 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 RBX1P62877 108 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 DEFB103AP81534 67 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 TSPY1Q01534 308 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 BDH1Q02338 343 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 RGS1Q08116 209 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 ASPHQ12797 758 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 TFCP2Q12800 502 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 ATP6AP1Q15904 470 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 GUCA2BQ16661 112 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 ZSWIM7Q19AV6 140 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 SLC5A12Q1EHB4 618 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 NSUN5P1Q3KNT7 163 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 LRIT3Q3SXY7 679 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 TMEM52BQ4KMG9 183 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 VAX1Q5SQQ9 334 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 MPP7Q5T2T1 576 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 SLC39A4Q6P5W5 647 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 CCDC137Q6PK04 289 aaKnown RBP0.01□□□□□ -2.41
COPB1-212ENST00000534771 B3GLCTQ6Y288 498 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 GBP6Q6ZN66 633 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 ZNF571Q7Z3V5 609 aaPredicted RBP0.01□□□□□ -2.41
COPB1-212ENST00000534771 ADM2Q7Z4H4 148 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 ZSCAN30Q86W11 494 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 CNTN4Q8IWV2 1026 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 ATAD1Q8NBU5 361 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 APCDD1LQ8NCL9 501 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 CCNYQ8ND76 341 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 OR10G4Q8NGN3 311 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 PHYHIPQ92561 330 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 TEKT1Q969V4 418 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 ADIPOR1Q96A54 375 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 CREB3L1Q96BA8 519 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 DNAJC19Q96DA6 116 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 ZNF317Q96PQ6 595 aaPredicted RBP0.01□□□□□ -2.41
COPB1-212ENST00000534771 CAMK2N2Q96S95 79 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 CCT7Q99832 543 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 ECSITQ9BQ95 431 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 TBC1D10AQ9BXI6 508 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 NACA2Q9H009 215 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 ABCG4Q9H172 646 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 C20orf85Q9H1P6 137 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 LINC00597Q9H2U6 94 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 ZNF385DQ9H6B1 395 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 SIAEQ9HAT2 523 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 C12orf10Q9HB07 376 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 UVRAGQ9P2Y5 699 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 COPS7AQ9UBW8 275 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 WARS2Q9UGM6 360 aaKnown RBP0.01□□□□□ -2.41
COPB1-212ENST00000534771 XPO7Q9UIA9 1087 aaKnown RBP0.01□□□□□ -2.41
COPB1-212ENST00000534771 ATP10DQ9P241 1426 aa0.01□□□□□ -2.41
COPB1-212ENST00000534771 AHDC1Q5TGY3 1603 aaPredicted RBP0.01□□□□□ -2.41
COPB1-212ENST00000534771 C5orf51A6NDU8 294 aa0□□□□□ -2.41
COPB1-212ENST00000534771 E7EQL1 145 aa0□□□□□ -2.41
COPB1-212ENST00000534771 E7ESA3 106 aa0□□□□□ -2.41
COPB1-212ENST00000534771 H3BMQ9 156 aa0□□□□□ -2.41
COPB1-212ENST00000534771 H3BNH8 94 aa0□□□□□ -2.41
COPB1-212ENST00000534771 H3BTX0 84 aa0□□□□□ -2.41
COPB1-212ENST00000534771 ADAM12O43184 909 aa0□□□□□ -2.41
COPB1-212ENST00000534771 ZBTB14O43829 449 aa0□□□□□ -2.41
COPB1-212ENST00000534771 TPST2O60704 377 aa0□□□□□ -2.41
COPB1-212ENST00000534771 KLHL2O95198 593 aa0□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms