RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, human

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSC-208	ENST00000533897	POMT2	Q9UKY4	750 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	TMEM272	A0A1B0GTI8	110 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897		A0A1B0GVC2	190 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897		A6NIN4	97 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	DUXA	A6NLW8	204 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	TTLL8	A6PVC2	850 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	AIP	O00170	330 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	ARPC3	O15145	178 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	LAT	O43561	262 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	CTNS	O60931	367 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	SRSF10	O75494	262 aa	Known RBP	4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	ANXA3	P12429	323 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	SNRPB	P14678	240 aa	Known RBP	4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	RAB3B	P20337	219 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	ACSL1	P33121	698 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	HCCS	P53701	268 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	ADPRH	P54922	357 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	RPS15A	P62244	130 aa	Known RBP	4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	ACTC1	P68032	377 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	ACTA1	P68133	377 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	POU4F2	Q12837	409 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	FGFBP1	Q14512	234 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	ANGPT1	Q15389	498 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	GRK1	Q15835	563 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	C2orf68	Q2NKX9	166 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	ESPNL	Q6ZVH7	1005 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	PLEKHM3	Q6ZWE6	761 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	PRSS41	Q7RTY9	318 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	CEACAM19	Q7Z692	300 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	SYT9	Q86SS6	491 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	ZNF595	Q8IYB9	648 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	MS4A15	Q8N5U1	240 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	ARMC5	Q96C12	935 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	ZC3H10	Q96K80	434 aa	Known RBP	4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	C12orf66	Q96MD2	445 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	TBC1D29	Q9UFV1	150 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	KLHDC2	Q9Y2U9	406 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	MPDZ	O75970	2070 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	GXYLT2	A0PJZ3	443 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	HCRTR1	O43613	425 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	FGF17	O60258	216 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	REM1	O75628	298 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	B3GALNT1	O75752	331 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	IL5	P05113	134 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	CD3G	P09693	182 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	SLC35G4	P0C7Q5	338 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	OR2T7	P0C7T2	308 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	GKN3P	P0CG01	181 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	HIST1H1C	P16403	213 aa	Known RBP	4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	CTRB1	P17538	263 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	SDHB	P21912	280 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	TALDO1	P37837	337 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	DIO1	P49895	249 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	SCAND1	P57086	179 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	KIAA1024L	P59773	190 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	RAB8A	P61006	207 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	RPL6	Q02878	288 aa	Known RBP	4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	AMZ1	Q400G9	498 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	EIPR1	Q53HC9	387 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	CTRB2	Q6GPI1	263 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	FDX2	Q6P4F2	183 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	ZC3H14	Q6PJT7	736 aa	Known RBP	4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	NPSR1	Q6W5P4	371 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	MED25	Q71SY5	747 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	UBE2Q1	Q7Z7E8	422 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	ADGRD2	Q7Z7M1	963 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	AMIGO1	Q86WK6	493 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	ARL14	Q8N4G2	192 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	POMGNT2	Q8NAT1	580 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	OR2T27	Q8NH04	317 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	ING5	Q8WYH8	240 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	CNOT9	Q92600	299 aa	Known RBP	4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	NSMAF	Q92636	917 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	MCHR2	Q969V1	340 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	SLC25A28	Q96A46	364 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	VSTM2L	Q96N03	204 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	BBS4	Q96RK4	519 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	MYADM	Q96S97	322 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	GAS2L1	Q99501	681 aa	Predicted RBP	4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	PLA2G2F	Q9BZM2	168 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	DPAGT1	Q9H3H5	408 aa		4.05	□□□□□ -1.76
CTSC-208	ENST00000533897	TRAV27	A0A087WT01	109 aa		4.04	□□□□□ -1.76
CTSC-208	ENST00000533897	IFITM5	A6NNB3	132 aa		4.04	□□□□□ -1.76
CTSC-208	ENST00000533897	C4orf47	A7E2U8	309 aa		4.04	□□□□□ -1.76
CTSC-208	ENST00000533897		H3BMH7	237 aa		4.04	□□□□□ -1.76
CTSC-208	ENST00000533897	GABARAP	H6UMI1	98 aa		4.04	□□□□□ -1.76
CTSC-208	ENST00000533897	ARHGEF9	O43307	516 aa		4.04	□□□□□ -1.76
CTSC-208	ENST00000533897	NDUFA2	O43678	99 aa		4.04	□□□□□ -1.76
CTSC-208	ENST00000533897	FGF2	P09038	288 aa		4.04	□□□□□ -1.76
CTSC-208	ENST00000533897	VSIG10L2	P0DP72	767 aa		4.04	□□□□□ -1.76
CTSC-208	ENST00000533897	CD96	P40200	585 aa		4.04	□□□□□ -1.76
CTSC-208	ENST00000533897	RGS8	P57771	180 aa	Predicted RBP	4.04	□□□□□ -1.76
CTSC-208	ENST00000533897	RPS7	P62081	194 aa	Known RBP	4.04	□□□□□ -1.76
CTSC-208	ENST00000533897	TSTA3	Q13630	321 aa	Predicted RBP	4.04	□□□□□ -1.76
CTSC-208	ENST00000533897	FNDC3B	Q53EP0	1204 aa	Known RBP	4.04	□□□□□ -1.76
CTSC-208	ENST00000533897	SLC35D3	Q5M8T2	416 aa		4.04	□□□□□ -1.76
CTSC-208	ENST00000533897	FAM69A	Q5T7M9	428 aa		4.04	□□□□□ -1.76
CTSC-208	ENST00000533897	SLC22A10	Q63ZE4	541 aa		4.04	□□□□□ -1.76
CTSC-208	ENST00000533897	B3GNTL1	Q67FW5	361 aa	Predicted RBP	4.04	□□□□□ -1.76
CTSC-208	ENST00000533897	RPL22L1	Q6P5R6	122 aa	Known RBP	4.04	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms