RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 ZNF814B7Z6K7 855 aa26.87■■□□□ 1.89
SSSCA1-207ENST00000533115 PGM3O95394 542 aa26.87■■□□□ 1.89
SSSCA1-207ENST00000533115 ADAP00813 363 aa26.87■■□□□ 1.89
SSSCA1-207ENST00000533115 OR2B6P58173 313 aa26.87■■□□□ 1.89
SSSCA1-207ENST00000533115 COPZ1P61923 177 aa26.87■■□□□ 1.89
SSSCA1-207ENST00000533115 SFRP5Q5T4F7 317 aa26.87■■□□□ 1.89
SSSCA1-207ENST00000533115 GCNT6Q5T4J0 391 aa26.87■■□□□ 1.89
SSSCA1-207ENST00000533115 WBP2NLQ6ICG8 309 aa26.87■■□□□ 1.89
SSSCA1-207ENST00000533115 GALNT5Q7Z7M9 940 aa26.87■■□□□ 1.89
SSSCA1-207ENST00000533115 C10orf111Q8N326 155 aa26.87■■□□□ 1.89
SSSCA1-207ENST00000533115 ALPK1Q96QP1 1244 aa26.87■■□□□ 1.89
SSSCA1-207ENST00000533115 EMC3Q9P0I2 261 aa26.87■■□□□ 1.89
SSSCA1-207ENST00000533115 ITPR3Q14573 2671 aa26.86■■□□□ 1.89
SSSCA1-207ENST00000533115 ZNF716A6NP11 495 aa26.86■■□□□ 1.89
SSSCA1-207ENST00000533115 ARAFP10398 606 aa26.86■■□□□ 1.89
SSSCA1-207ENST00000533115 CXCR1P25024 350 aa26.86■■□□□ 1.89
SSSCA1-207ENST00000533115 LOXP28300 417 aaPredicted RBP26.86■■□□□ 1.89
SSSCA1-207ENST00000533115 P2RY6Q15077 328 aa26.86■■□□□ 1.89
SSSCA1-207ENST00000533115 Q6ZT83 130 aa26.86■■□□□ 1.89
SSSCA1-207ENST00000533115 LSRQ86X29 649 aaPredicted RBP26.86■■□□□ 1.89
SSSCA1-207ENST00000533115 CADM2Q8N3J6 435 aa26.86■■□□□ 1.89
SSSCA1-207ENST00000533115 NFKBIDQ8NI38 313 aa26.86■■□□□ 1.89
SSSCA1-207ENST00000533115 PIGXQ8TBF5 258 aa26.86■■□□□ 1.89
SSSCA1-207ENST00000533115 S100PBPQ96BU1 408 aa26.86■■□□□ 1.89
SSSCA1-207ENST00000533115 HS3ST6Q96QI5 342 aa26.86■■□□□ 1.89
SSSCA1-207ENST00000533115 ZNF446Q9NWS9 450 aa26.86■■□□□ 1.89
SSSCA1-207ENST00000533115 NIPSNAP3AQ9UFN0 247 aaPredicted RBP26.86■■□□□ 1.89
SSSCA1-207ENST00000533115 PRSS50Q9UI38 385 aa26.86■■□□□ 1.89
SSSCA1-207ENST00000533115 LEF1Q9UJU2 399 aaPredicted RBP26.86■■□□□ 1.89
SSSCA1-207ENST00000533115 CORO2BQ9UQ03 480 aa26.86■■□□□ 1.89
SSSCA1-207ENST00000533115 MAP1AP78559 2803 aaPredicted RBP26.86■■□□□ 1.89
SSSCA1-207ENST00000533115 PRRC2AP48634 2157 aaKnown RBP26.85■■□□□ 1.89
SSSCA1-207ENST00000533115 A0A0G2JND7 137 aa26.85■■□□□ 1.89
SSSCA1-207ENST00000533115 KLF4O43474 513 aa26.85■■□□□ 1.89
SSSCA1-207ENST00000533115 IMPDH2P12268 514 aa26.85■■□□□ 1.89
SSSCA1-207ENST00000533115 PRG2P13727 222 aa26.85■■□□□ 1.89
SSSCA1-207ENST00000533115 SLC35A1P78382 337 aa26.85■■□□□ 1.89
SSSCA1-207ENST00000533115 TSC22D1Q15714 1073 aa26.85■■□□□ 1.89
SSSCA1-207ENST00000533115 DEFB113Q30KQ7 82 aa26.85■■□□□ 1.89
SSSCA1-207ENST00000533115 BEX5Q5H9J7 111 aa26.85■■□□□ 1.89
SSSCA1-207ENST00000533115 DLEU7Q6UYE1 221 aa26.85■■□□□ 1.89
SSSCA1-207ENST00000533115 SERPINA11Q86U17 422 aa26.85■■□□□ 1.89
SSSCA1-207ENST00000533115 IKZF5Q9H5V7 419 aa26.85■■□□□ 1.89
SSSCA1-207ENST00000533115 ZC3H12DA2A288 527 aaKnown RBP26.84■■□□□ 1.89
SSSCA1-207ENST00000533115 EVPLLA8MZ36 301 aa26.84■■□□□ 1.89
SSSCA1-207ENST00000533115 EIF1BO60739 113 aaKnown RBP26.84■■□□□ 1.89
SSSCA1-207ENST00000533115 ETS2P15036 469 aa26.84■■□□□ 1.89
SSSCA1-207ENST00000533115 GPX2P18283 190 aa26.84■■□□□ 1.89
SSSCA1-207ENST00000533115 CD53P19397 219 aa26.84■■□□□ 1.89
SSSCA1-207ENST00000533115 IL32P24001 234 aa26.84■■□□□ 1.89
SSSCA1-207ENST00000533115 EDNRAP25101 427 aa26.84■■□□□ 1.89
SSSCA1-207ENST00000533115 H3F3AP84243 136 aa26.84■■□□□ 1.89
SSSCA1-207ENST00000533115 ITGADQ13349 1161 aa26.84■■□□□ 1.89
SSSCA1-207ENST00000533115 WFDC8Q8IUA0 241 aa26.84■■□□□ 1.89
SSSCA1-207ENST00000533115 CCDC103Q8IW40 242 aa26.84■■□□□ 1.89
SSSCA1-207ENST00000533115 ZNF100Q8IYN0 542 aa26.84■■□□□ 1.89
SSSCA1-207ENST00000533115 KISS1RQ969F8 398 aaPredicted RBP26.84■■□□□ 1.89
SSSCA1-207ENST00000533115 POTEKPQ9BYX7 375 aa26.84■■□□□ 1.89
SSSCA1-207ENST00000533115 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP26.83■■□□□ 1.89
SSSCA1-207ENST00000533115 GPR171O14626 319 aa26.83■■□□□ 1.89
SSSCA1-207ENST00000533115 SLC16A1P53985 500 aa26.83■■□□□ 1.89
SSSCA1-207ENST00000533115 CDK6Q00534 326 aa26.83■■□□□ 1.89
SSSCA1-207ENST00000533115 REEP3Q6NUK4 255 aa26.83■■□□□ 1.89
SSSCA1-207ENST00000533115 ZC3HAV1Q7Z2W4 902 aaKnown RBP26.83■■□□□ 1.89
SSSCA1-207ENST00000533115 SLC35B4Q969S0 331 aa26.83■■□□□ 1.89
SSSCA1-207ENST00000533115 NAA11Q9BSU3 229 aaPredicted RBP26.83■■□□□ 1.89
SSSCA1-207ENST00000533115 NOSIPQ9Y314 301 aaKnown RBP26.83■■□□□ 1.89
SSSCA1-207ENST00000533115 NDUFAF1Q9Y375 327 aa26.83■■□□□ 1.89
SSSCA1-207ENST00000533115 RAMP1O60894 148 aa26.82■■□□□ 1.88
SSSCA1-207ENST00000533115 FPR1P21462 350 aa26.82■■□□□ 1.88
SSSCA1-207ENST00000533115 RUNDC3AQ59EK9 446 aa26.82■■□□□ 1.88
SSSCA1-207ENST00000533115 METTL21CQ5VZV1 264 aa26.82■■□□□ 1.88
SSSCA1-207ENST00000533115 CPPED1Q9BRF8 314 aaPredicted RBP26.82■■□□□ 1.88
SSSCA1-207ENST00000533115 TMEM38AQ9H6F2 299 aa26.82■■□□□ 1.88
SSSCA1-207ENST00000533115 ANGPT2O15123 496 aa26.81■■□□□ 1.88
SSSCA1-207ENST00000533115 FRS3O43559 492 aa26.81■■□□□ 1.88
SSSCA1-207ENST00000533115 CNOT4O95628 575 aaKnown RBP26.81■■□□□ 1.88
SSSCA1-207ENST00000533115 PRKAR1BP31321 381 aa26.81■■□□□ 1.88
SSSCA1-207ENST00000533115 IDUAP35475 653 aa26.81■■□□□ 1.88
SSSCA1-207ENST00000533115 NR1H2P55055 460 aa26.81■■□□□ 1.88
SSSCA1-207ENST00000533115 DHDDSQ86SQ9 333 aa26.81■■□□□ 1.88
SSSCA1-207ENST00000533115 DPP10Q8N608 796 aa26.81■■□□□ 1.88
SSSCA1-207ENST00000533115 TSPEARQ8WU66 669 aa26.81■■□□□ 1.88
SSSCA1-207ENST00000533115 HSD17B8Q92506 261 aa26.81■■□□□ 1.88
SSSCA1-207ENST00000533115 C3orf49Q96BT1 292 aa26.81■■□□□ 1.88
SSSCA1-207ENST00000533115 USB1Q9BQ65 265 aaKnown RBP26.81■■□□□ 1.88
SSSCA1-207ENST00000533115 UBTD1Q9HAC8 227 aa26.81■■□□□ 1.88
SSSCA1-207ENST00000533115 MED13LQ71F56 2210 aa26.81■■□□□ 1.88
SSSCA1-207ENST00000533115 BNIP2Q12982 314 aa26.8■■□□□ 1.88
SSSCA1-207ENST00000533115 SCARB2Q14108 478 aa26.8■■□□□ 1.88
SSSCA1-207ENST00000533115 ACKR1Q16570 336 aa26.8■■□□□ 1.88
SSSCA1-207ENST00000533115 BHLHA15Q7RTS1 189 aaPredicted RBP26.8■■□□□ 1.88
SSSCA1-207ENST00000533115 KRT73Q86Y46 540 aa26.8■■□□□ 1.88
SSSCA1-207ENST00000533115 PLPPR2Q96GM1 343 aa26.8■■□□□ 1.88
SSSCA1-207ENST00000533115 SPATA5L1Q9BVQ7 753 aa26.8■■□□□ 1.88
SSSCA1-207ENST00000533115 TMEM120AQ9BXJ8 343 aa26.8■■□□□ 1.88
SSSCA1-207ENST00000533115 RSPO3Q9BXY4 272 aaPredicted RBP26.8■■□□□ 1.88
SSSCA1-207ENST00000533115 BEX4Q9NWD9 120 aaPredicted RBP26.8■■□□□ 1.88
SSSCA1-207ENST00000533115 LIPT2A6NK58 231 aa26.79■■□□□ 1.88
SSSCA1-207ENST00000533115 A8MVM7 634 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms