RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 GSNP06396 782 aa13.54□□□□□ -0.24
MRPS28-209ENST00000522987 IMPDH2P12268 514 aa13.54□□□□□ -0.24
MRPS28-209ENST00000522987 MAGEA8P43361 318 aa13.54□□□□□ -0.24
MRPS28-209ENST00000522987 ABCE1P61221 599 aaKnown RBP13.54□□□□□ -0.24
MRPS28-209ENST00000522987 KCNJ10P78508 379 aa13.54□□□□□ -0.24
MRPS28-209ENST00000522987 RAB35Q15286 201 aa13.54□□□□□ -0.24
MRPS28-209ENST00000522987 NRF1Q16656 503 aa13.54□□□□□ -0.24
MRPS28-209ENST00000522987 TMEM249Q2WGJ8 235 aa13.54□□□□□ -0.24
MRPS28-209ENST00000522987 FAM174BQ3ZCQ3 159 aa13.54□□□□□ -0.24
MRPS28-209ENST00000522987 CHRFAM7AQ494W8 412 aa13.54□□□□□ -0.24
MRPS28-209ENST00000522987 TSPO2Q5TGU0 170 aa13.54□□□□□ -0.24
MRPS28-209ENST00000522987 P2RY8Q86VZ1 359 aa13.54□□□□□ -0.24
MRPS28-209ENST00000522987 RNF130Q86XS8 419 aa13.54□□□□□ -0.24
MRPS28-209ENST00000522987 WDR31Q8NA23 367 aa13.54□□□□□ -0.24
MRPS28-209ENST00000522987 OR8J2Q8NGG1 315 aa13.54□□□□□ -0.24
MRPS28-209ENST00000522987 MIPOL1Q8TD10 442 aa13.54□□□□□ -0.24
MRPS28-209ENST00000522987 TEX37Q96LM6 180 aa13.54□□□□□ -0.24
MRPS28-209ENST00000522987 INPP5KQ9BT40 448 aa13.54□□□□□ -0.24
MRPS28-209ENST00000522987 ASIC5Q9NY37 505 aa13.54□□□□□ -0.24
MRPS28-209ENST00000522987 PRSS51A0A1B0GVH4 220 aa13.53□□□□□ -0.24
MRPS28-209ENST00000522987 ATP6V1G2-DDX39BF2Z307 99 aa13.53□□□□□ -0.24
MRPS28-209ENST00000522987 HMGN4O00479 90 aa13.53□□□□□ -0.24
MRPS28-209ENST00000522987 GPR171O14626 319 aa13.53□□□□□ -0.24
MRPS28-209ENST00000522987 KLF11O14901 512 aa13.53□□□□□ -0.24
MRPS28-209ENST00000522987 SERPINE1P05121 402 aa13.53□□□□□ -0.24
MRPS28-209ENST00000522987 CHRM4P08173 479 aa13.53□□□□□ -0.24
MRPS28-209ENST00000522987 ZNF16P17020 682 aaPredicted RBP13.53□□□□□ -0.24
MRPS28-209ENST00000522987 BGNP21810 368 aa13.53□□□□□ -0.24
MRPS28-209ENST00000522987 PTAFRP25105 342 aa13.53□□□□□ -0.24
MRPS28-209ENST00000522987 TACR3P29371 465 aa13.53□□□□□ -0.24
MRPS28-209ENST00000522987 CDKN2CP42773 168 aa13.53□□□□□ -0.24
MRPS28-209ENST00000522987 SRSF2Q01130 221 aaKnown RBP13.53□□□□□ -0.24
MRPS28-209ENST00000522987 CASP8Q14790 479 aa13.53□□□□□ -0.24
MRPS28-209ENST00000522987 PDK3Q15120 406 aa13.53□□□□□ -0.24
MRPS28-209ENST00000522987 KRT71Q3SY84 523 aa13.53□□□□□ -0.24
MRPS28-209ENST00000522987 COX20Q5RI15 118 aa13.53□□□□□ -0.24
MRPS28-209ENST00000522987 C6orf52Q5T4I8 152 aa13.53□□□□□ -0.24
MRPS28-209ENST00000522987 PODNL1Q6PEZ8 512 aa13.53□□□□□ -0.24
MRPS28-209ENST00000522987 HOMEZQ8IX15 550 aa13.53□□□□□ -0.24
MRPS28-209ENST00000522987 NANOS1Q8WY41 292 aaKnown RBP13.53□□□□□ -0.24
MRPS28-209ENST00000522987 NEURL3Q96EH8 262 aa13.53□□□□□ -0.24
MRPS28-209ENST00000522987 KCNK17Q96T54 332 aa13.53□□□□□ -0.24
MRPS28-209ENST00000522987 SORT1Q99523 831 aa13.53□□□□□ -0.24
MRPS28-209ENST00000522987 SAP130Q9H0E3 1048 aa13.53□□□□□ -0.24
MRPS28-209ENST00000522987 PNPOQ9NVS9 261 aa13.53□□□□□ -0.24
MRPS28-209ENST00000522987 TMEM181Q9P2C4 612 aa13.53□□□□□ -0.24
MRPS28-209ENST00000522987 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.53□□□□□ -0.24
MRPS28-209ENST00000522987 OSGIN1Q9UJX0 560 aa13.53□□□□□ -0.24
MRPS28-209ENST00000522987 MGAT4BQ9UQ53 548 aa13.53□□□□□ -0.24
MRPS28-209ENST00000522987 HDGFL3Q9Y3E1 203 aa13.53□□□□□ -0.24
MRPS28-209ENST00000522987 FLVCR1Q9Y5Y0 555 aa13.53□□□□□ -0.24
MRPS28-209ENST00000522987 V9GYY5 206 aaPredicted RBP13.53□□□□□ -0.24
MRPS28-209ENST00000522987 ANKRD28O15084 1053 aa13.52□□□□□ -0.25
MRPS28-209ENST00000522987 AGR2O95994 175 aa13.52□□□□□ -0.25
MRPS28-209ENST00000522987 IFNA2P01563 188 aa13.52□□□□□ -0.25
MRPS28-209ENST00000522987 MYZAPP0CAP1 466 aa13.52□□□□□ -0.25
MRPS28-209ENST00000522987 S100A3P33764 101 aa13.52□□□□□ -0.25
MRPS28-209ENST00000522987 SLC1A6P48664 564 aa13.52□□□□□ -0.25
MRPS28-209ENST00000522987 UFM1P61960 85 aa13.52□□□□□ -0.25
MRPS28-209ENST00000522987 LGALS3BPQ08380 585 aa13.52□□□□□ -0.25
MRPS28-209ENST00000522987 BNIP2Q12982 314 aa13.52□□□□□ -0.25
MRPS28-209ENST00000522987 ANXA8L1Q5VT79 327 aa13.52□□□□□ -0.25
MRPS28-209ENST00000522987 IL17RELQ6ZVW7 336 aa13.52□□□□□ -0.25
MRPS28-209ENST00000522987 DEPDC4Q8N2C3 294 aa13.52□□□□□ -0.25
MRPS28-209ENST00000522987 ARIH2OSQ8N7S6 290 aa13.52□□□□□ -0.25
MRPS28-209ENST00000522987 OR10H5Q8NGA6 315 aa13.52□□□□□ -0.25
MRPS28-209ENST00000522987 FAM168AQ92567 244 aa13.52□□□□□ -0.25
MRPS28-209ENST00000522987 FBXO17Q96EF6 278 aa13.52□□□□□ -0.25
MRPS28-209ENST00000522987 TNFRSF13CQ96RJ3 184 aa13.52□□□□□ -0.25
MRPS28-209ENST00000522987 ROPN1BQ9BZX4 212 aaPredicted RBP13.52□□□□□ -0.25
MRPS28-209ENST00000522987 GRIP2Q9C0E4 1043 aa13.52□□□□□ -0.25
MRPS28-209ENST00000522987 SLC38A1Q9H2H9 487 aa13.52□□□□□ -0.25
MRPS28-209ENST00000522987 ROPN1Q9HAT0 212 aaPredicted RBP13.52□□□□□ -0.25
MRPS28-209ENST00000522987 SLC17A5Q9NRA2 495 aa13.52□□□□□ -0.25
MRPS28-209ENST00000522987 POLE3Q9NRF9 147 aa13.52□□□□□ -0.25
MRPS28-209ENST00000522987 MALT1Q9UDY8 824 aa13.52□□□□□ -0.25
MRPS28-209ENST00000522987 MOKQ9UQ07 419 aa13.52□□□□□ -0.25
MRPS28-209ENST00000522987 RAP2CQ9Y3L5 183 aa13.52□□□□□ -0.25
MRPS28-209ENST00000522987 STAB1Q9NY15 2570 aa13.51□□□□□ -0.25
MRPS28-209ENST00000522987 GOLGA8QA0A0J9YX86 632 aa13.51□□□□□ -0.25
MRPS28-209ENST00000522987 GOLGA8OA6NCC3 632 aa13.51□□□□□ -0.25
MRPS28-209ENST00000522987 E9PBE3 544 aa13.51□□□□□ -0.25
MRPS28-209ENST00000522987 GOLGA8NF8WBI6 632 aa13.51□□□□□ -0.25
MRPS28-209ENST00000522987 PHF1O43189 567 aaPredicted RBP13.51□□□□□ -0.25
MRPS28-209ENST00000522987 AKR7A3O95154 331 aa13.51□□□□□ -0.25
MRPS28-209ENST00000522987 ALDOCP09972 364 aaKnown RBP13.51□□□□□ -0.25
MRPS28-209ENST00000522987 GKN3PP0CG01 181 aa13.51□□□□□ -0.25
MRPS28-209ENST00000522987 LBPP18428 481 aa13.51□□□□□ -0.25
MRPS28-209ENST00000522987 IL12AP29459 219 aa13.51□□□□□ -0.25
MRPS28-209ENST00000522987 RPL14P50914 215 aaKnown RBP13.51□□□□□ -0.25
MRPS28-209ENST00000522987 POLR2HP52434 150 aaKnown RBP13.51□□□□□ -0.25
MRPS28-209ENST00000522987 SLC16A1P53985 500 aa13.51□□□□□ -0.25
MRPS28-209ENST00000522987 CEACAM7Q14002 265 aa13.51□□□□□ -0.25
MRPS28-209ENST00000522987 OR7A5Q15622 319 aa13.51□□□□□ -0.25
MRPS28-209ENST00000522987 CARTPTQ16568 116 aa13.51□□□□□ -0.25
MRPS28-209ENST00000522987 HIKESHIQ53FT3 197 aa13.51□□□□□ -0.25
MRPS28-209ENST00000522987 OTUD3Q5T2D3 398 aaPredicted RBP13.51□□□□□ -0.25
MRPS28-209ENST00000522987 MRPL2Q5T653 305 aaKnown RBP13.51□□□□□ -0.25
MRPS28-209ENST00000522987 ZNF621Q6ZSS3 439 aa13.51□□□□□ -0.25
MRPS28-209ENST00000522987 TMEM99Q8N816 258 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms