RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 DAZAP2Q15038 168 aaPredicted RBP18.38■□□□□ 0.53
TRIM35-203ENST00000521253 GLIPR1L2Q4G1C9 344 aa18.38■□□□□ 0.53
TRIM35-203ENST00000521253 NANOGP8Q6NSW7 305 aa18.38■□□□□ 0.53
TRIM35-203ENST00000521253 NUFIP2Q7Z417 695 aaKnown RBP18.38■□□□□ 0.53
TRIM35-203ENST00000521253 MTDHQ86UE4 582 aaKnown RBP18.38■□□□□ 0.53
TRIM35-203ENST00000521253 OR10A6Q8NH74 314 aa18.38■□□□□ 0.53
TRIM35-203ENST00000521253 DACH2Q96NX9 599 aa18.38■□□□□ 0.53
TRIM35-203ENST00000521253 GPATCH1Q9BRR8 931 aaKnown RBP18.38■□□□□ 0.53
TRIM35-203ENST00000521253 NANOGQ9H9S0 305 aa18.38■□□□□ 0.53
TRIM35-203ENST00000521253 BCO1Q9HAY6 547 aa18.38■□□□□ 0.53
TRIM35-203ENST00000521253 TMEM181Q9P2C4 612 aa18.38■□□□□ 0.53
TRIM35-203ENST00000521253 HRNRQ86YZ3 2850 aaPredicted RBP18.38■□□□□ 0.53
TRIM35-203ENST00000521253 FAM221AA4D161 298 aa18.37■□□□□ 0.53
TRIM35-203ENST00000521253 PRORSD1PA6NEY8 169 aa18.37■□□□□ 0.53
TRIM35-203ENST00000521253 C16orf97H3BN30 126 aa18.37■□□□□ 0.53
TRIM35-203ENST00000521253 SLC22A2O15244 555 aa18.37■□□□□ 0.53
TRIM35-203ENST00000521253 SERPINB7O75635 380 aa18.37■□□□□ 0.53
TRIM35-203ENST00000521253 SEC24CP53992 1094 aa18.37■□□□□ 0.53
TRIM35-203ENST00000521253 PCBP3P57721 371 aaKnown RBP18.37■□□□□ 0.53
TRIM35-203ENST00000521253 OR2B6P58173 313 aa18.37■□□□□ 0.53
TRIM35-203ENST00000521253 RABL3Q5HYI8 236 aa18.37■□□□□ 0.53
TRIM35-203ENST00000521253 ABLIM2Q6H8Q1 611 aa18.37■□□□□ 0.53
TRIM35-203ENST00000521253 ARMC8Q8IUR7 673 aa18.37■□□□□ 0.53
TRIM35-203ENST00000521253 C3orf49Q96BT1 292 aa18.37■□□□□ 0.53
TRIM35-203ENST00000521253 ZHX1-C8orf76Q96EF9 292 aa18.37■□□□□ 0.53
TRIM35-203ENST00000521253 TACO1Q9BSH4 297 aaKnown RBP18.37■□□□□ 0.53
TRIM35-203ENST00000521253 RASSF1Q9NS23 344 aa18.37■□□□□ 0.53
TRIM35-203ENST00000521253 NDRG3Q9UGV2 375 aa18.37■□□□□ 0.53
TRIM35-203ENST00000521253 TRAPPC4Q9Y296 219 aa18.37■□□□□ 0.53
TRIM35-203ENST00000521253 TESMINQ9Y4I5 508 aa18.37■□□□□ 0.53
TRIM35-203ENST00000521253 OTOGQ6ZRI0 2925 aa18.37■□□□□ 0.53
TRIM35-203ENST00000521253 DNPH1O43598 174 aa18.36■□□□□ 0.53
TRIM35-203ENST00000521253 GCM2O75603 506 aaPredicted RBP18.36■□□□□ 0.53
TRIM35-203ENST00000521253 MPDZO75970 2070 aa18.36■□□□□ 0.53
TRIM35-203ENST00000521253 MFN2O95140 757 aa18.36■□□□□ 0.53
TRIM35-203ENST00000521253 NPPAP01160 153 aa18.36■□□□□ 0.53
TRIM35-203ENST00000521253 IMPDH2P12268 514 aa18.36■□□□□ 0.53
TRIM35-203ENST00000521253 GZMMP51124 257 aa18.36■□□□□ 0.53
TRIM35-203ENST00000521253 DMTNQ08495 405 aa18.36■□□□□ 0.53
TRIM35-203ENST00000521253 BNIP2Q12982 314 aa18.36■□□□□ 0.53
TRIM35-203ENST00000521253 TFAP2EQ6VUC0 442 aa18.36■□□□□ 0.53
TRIM35-203ENST00000521253 SPATA21Q7Z572 469 aa18.36■□□□□ 0.53
TRIM35-203ENST00000521253 STK32CQ86UX6 486 aa18.36■□□□□ 0.53
TRIM35-203ENST00000521253 OR8J3Q8NGG0 315 aa18.36■□□□□ 0.53
TRIM35-203ENST00000521253 ZNF775Q96BV0 537 aaPredicted RBP18.36■□□□□ 0.53
TRIM35-203ENST00000521253 ZNF300Q96RE9 604 aaPredicted RBP18.36■□□□□ 0.53
TRIM35-203ENST00000521253 KLHL4Q9C0H6 718 aa18.36■□□□□ 0.53
TRIM35-203ENST00000521253 PIF1Q9H611 641 aa18.36■□□□□ 0.53
TRIM35-203ENST00000521253 ZNF814B7Z6K7 855 aa18.35■□□□□ 0.53
TRIM35-203ENST00000521253 HTR2AP28223 471 aa18.35■□□□□ 0.53
TRIM35-203ENST00000521253 PCGF2P35227 344 aa18.35■□□□□ 0.53
TRIM35-203ENST00000521253 GYS2P54840 703 aa18.35■□□□□ 0.53
TRIM35-203ENST00000521253 SLC35A1P78382 337 aa18.35■□□□□ 0.53
TRIM35-203ENST00000521253 BEND4Q6ZU67 534 aa18.35■□□□□ 0.53
TRIM35-203ENST00000521253 ATG4DQ86TL0 474 aaPredicted RBP18.35■□□□□ 0.53
TRIM35-203ENST00000521253 POU5F2Q8N7G0 328 aa18.35■□□□□ 0.53
TRIM35-203ENST00000521253 SMYD1Q8NB12 490 aa18.35■□□□□ 0.53
TRIM35-203ENST00000521253 PCYOX1LQ8NBM8 494 aa18.35■□□□□ 0.53
TRIM35-203ENST00000521253 BHLHE22Q8NFJ8 381 aaPredicted RBP18.35■□□□□ 0.53
TRIM35-203ENST00000521253 WFIKKN1Q96NZ8 548 aa18.35■□□□□ 0.53
TRIM35-203ENST00000521253 SH3GL1Q99961 368 aa18.35■□□□□ 0.53
TRIM35-203ENST00000521253 ELAC2Q9BQ52 826 aaKnown RBP18.35■□□□□ 0.53
TRIM35-203ENST00000521253 POTEKPQ9BYX7 375 aa18.35■□□□□ 0.53
TRIM35-203ENST00000521253 FAM107BQ9H098 131 aa18.35■□□□□ 0.53
TRIM35-203ENST00000521253 CLEC4MQ9H2X3 399 aaPredicted RBP18.35■□□□□ 0.53
TRIM35-203ENST00000521253 KLHL28Q9NXS3 571 aa18.35■□□□□ 0.53
TRIM35-203ENST00000521253 CCDC168Q8NDH2 2452 aa18.34■□□□□ 0.53
TRIM35-203ENST00000521253 AKAP9Q99996 3911 aa18.34■□□□□ 0.53
TRIM35-203ENST00000521253 ZNF716A6NP11 495 aa18.34■□□□□ 0.53
TRIM35-203ENST00000521253 ZNF724A8MTY0 619 aa18.34■□□□□ 0.53
TRIM35-203ENST00000521253 A8MVM7 634 aa18.34■□□□□ 0.53
TRIM35-203ENST00000521253 M0QX08 132 aa18.34■□□□□ 0.53
TRIM35-203ENST00000521253 CCDC22O60826 627 aa18.34■□□□□ 0.53
TRIM35-203ENST00000521253 RAMP1O60894 148 aa18.34■□□□□ 0.53
TRIM35-203ENST00000521253 OPN1SWP03999 348 aa18.34■□□□□ 0.53
TRIM35-203ENST00000521253 FPR1P21462 350 aa18.34■□□□□ 0.53
TRIM35-203ENST00000521253 LSP1P33241 339 aa18.34■□□□□ 0.53
TRIM35-203ENST00000521253 IDUAP35475 653 aa18.34■□□□□ 0.53
TRIM35-203ENST00000521253 H3F3AP84243 136 aa18.34■□□□□ 0.53
TRIM35-203ENST00000521253 PDK3Q15120 406 aa18.34■□□□□ 0.53
TRIM35-203ENST00000521253 STAC2Q6ZMT1 411 aa18.34■□□□□ 0.53
TRIM35-203ENST00000521253 CCDC103Q8IW40 242 aa18.34■□□□□ 0.53
TRIM35-203ENST00000521253 SLC30A8Q8IWU4 369 aa18.34■□□□□ 0.53
TRIM35-203ENST00000521253 RCN3Q96D15 328 aa18.34■□□□□ 0.53
TRIM35-203ENST00000521253 WFDC6Q9BQY6 131 aa18.34■□□□□ 0.53
TRIM35-203ENST00000521253 MED18Q9BUE0 208 aa18.34■□□□□ 0.53
TRIM35-203ENST00000521253 PRR14Q9BWN1 585 aa18.34■□□□□ 0.53
TRIM35-203ENST00000521253 POLDIP3Q9BY77 421 aaKnown RBP18.34■□□□□ 0.53
TRIM35-203ENST00000521253 GID8Q9NWU2 228 aa18.34■□□□□ 0.53
TRIM35-203ENST00000521253 SLC13A4Q9UKG4 626 aa18.34■□□□□ 0.53
TRIM35-203ENST00000521253 IGKV3D-15A0A087WSY6 115 aa18.33■□□□□ 0.52
TRIM35-203ENST00000521253 TMEM229AB2RXF0 380 aa18.33■□□□□ 0.52
TRIM35-203ENST00000521253 CASKO14936 926 aa18.33■□□□□ 0.52
TRIM35-203ENST00000521253 EIF1BO60739 113 aaKnown RBP18.33■□□□□ 0.52
TRIM35-203ENST00000521253 RGS8P57771 180 aaPredicted RBP18.33■□□□□ 0.52
TRIM35-203ENST00000521253 CEACAM7Q14002 265 aa18.33■□□□□ 0.52
TRIM35-203ENST00000521253 VMACQ2NL98 169 aa18.33■□□□□ 0.52
TRIM35-203ENST00000521253 ANKRD34AQ69YU3 496 aa18.33■□□□□ 0.52
TRIM35-203ENST00000521253 C22orf34Q6ZV56 151 aa18.33■□□□□ 0.52
TRIM35-203ENST00000521253 GALNT5Q7Z7M9 940 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms